Os05g0551500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1639 family protein.
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Os05g0551500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1639 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.09 | 0.506 | 2.93 | -0.0449 | 0.0697 | 1 | 0.311 | -0.587 | 0.162 | 0.249 | 20 | 790 | -- | -- |
| 116.3 | 0.502 | 2.94 | -0.0709 | 0.0753 | 1.18 | 0.393 | -- | 0.157 | 24 | 19.86 | 778 | -- | -- |
| 116.42 | 0.503 | 2.93 | -0.0366 | 0.0679 | 0.919 | -- | -0.872 | 0.166 | 1.1 | 20.15 | 825 | -- | -- |
| 116.91 | 0.504 | 2.94 | -0.0799 | 0.0797 | 1.23 | -- | -- | 0.155 | 1.04 | 19.71 | 812 | -- | -- |
| 116.7 | 0.503 | 2.93 | -0.038 | -- | 0.858 | -- | -0.958 | 0.165 | -- | 20.15 | 825 | -- | -- |
| 126.62 | 0.528 | 2.96 | -0.31 | 0.00748 | -- | -0.494 | -- | 0.0588 | 11.5 | -- | -- | -- | -- |
| 127.63 | 0.529 | 2.96 | -0.331 | 0.0281 | -- | -- | -- | 0.0562 | 6.92 | -- | -- | -- | -- |
| 117.28 | 0.504 | 2.94 | -0.0869 | -- | 1.19 | -- | -- | 0.152 | -- | 19.69 | 812 | -- | -- |
| 117.06 | 0.504 | 2.94 | -- | 0.081 | 1.27 | -- | -- | 0.168 | 0.93 | 19.79 | 816 | -- | -- |
| 127.67 | 0.528 | 2.96 | -0.33 | -- | -- | -- | -- | 0.0568 | -- | -- | -- | -- | -- |
| 130.52 | 0.534 | 2.95 | -- | 0.0249 | -- | -- | -- | 0.0931 | 7.75 | -- | -- | -- | -- |
| 117.46 | 0.505 | 2.94 | -- | -- | 1.24 | -- | -- | 0.165 | -- | 19.74 | 813 | -- | -- |
| 130.56 | 0.533 | 2.96 | -- | -- | -- | -- | -- | 0.0934 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 108.27 | temperature | 25 | 270 | < th | dose dependent | rect. | 5 | 12 |
| 9 | 109.15 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 4 |
| 13 | 109.37 | temperature | 20 | 270 | < th | dose independent | rect. | 6 | 4 |
| 16 | 109.39 | temperature | 20 | 720 | < th | dose dependent | rect. | 3 | 7 |
| 34 | 109.82 | temperature | 20 | 720 | < th | dose dependent | rect. | 23 | 12 |
| 35 | 109.83 | temperature | 20 | 270 | < th | dose independent | rect. | 5 | 10 |
| 43 | 109.88 | temperature | 20 | 270 | < th | dose independent | rect. | 5 | 6 |
| 85 | 110.25 | temperature | 25 | 270 | < th | dose dependent | sin | 2 | NA |
| 89 | 110.28 | temperature | 20 | 720 | < th | dose dependent | sin | 6 | NA |
| 132 | 110.67 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 8 |
| 137 | 110.73 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 145 | 110.78 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 12 |
| 161 | 110.87 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 1 |
| 168 | 110.93 | temperature | 10 | 270 | > th | dose dependent | sin | 3 | NA |
| 180 | 110.98 | temperature | 20 | 270 | > th | dose independent | rect. | 4 | 12 |
| 187 | 111.01 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 210 | 111.14 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 10 |
| 319 | 111.64 | temperature | 15 | 30 | > th | dose dependent | rect. | 5 | 12 |
| 365 | 111.81 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 8 |
| 378 | 111.85 | temperature | 15 | 720 | > th | dose dependent | rect. | 5 | 1 |
| 449 | 112.10 | temperature | 20 | 270 | > th | dose independent | sin | 2 | NA |
| 459 | 112.14 | temperature | 30 | 30 | < th | dose dependent | sin | 0 | NA |
| 484 | 112.19 | temperature | 20 | 270 | < th | dose independent | sin | 1 | NA |
| 517 | 112.35 | temperature | 10 | 30 | > th | dose dependent | sin | 0 | NA |
| 523 | 112.38 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 14 |
| 551 | 112.48 | temperature | 25 | 90 | < th | dose dependent | rect. | 9 | 2 |
| 591 | 112.64 | temperature | 10 | 720 | > th | dose dependent | sin | 6 | NA |
| 619 | 112.75 | temperature | 20 | 720 | < th | dose independent | sin | 4 | NA |
| 674 | 112.85 | temperature | 20 | 10 | < th | dose dependent | rect. | 9 | 6 |
| 679 | 112.87 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 687 | 112.89 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 5 |
| 689 | 112.90 | temperature | 20 | 720 | > th | dose independent | sin | 4 | NA |
| 763 | 113.08 | temperature | 15 | 30 | > th | dose dependent | rect. | 3 | 14 |
| 994 | 113.57 | temperature | 20 | 10 | < th | dose dependent | rect. | 9 | 3 |