Os05g0550700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor serine/threonine kinase PR5K.
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Os05g0550700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Receptor serine/threonine kinase PR5K.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 149.79 | 0.575 | 8.86 | -0.0431 | 1.47 | -2.45 | 0.532 | -0.559 | 0.898 | 3.55 | 20.11 | 3488 | -- | -- |
| 149.91 | 0.57 | 8.88 | -0.0779 | 1.46 | -2.27 | 0.539 | -- | 0.885 | 3.54 | 20.21 | 3473 | -- | -- |
| 150.64 | 0.572 | 8.86 | -0.0434 | 1.47 | -2.46 | -- | -0.606 | 0.898 | 3.55 | 20.1 | 3472 | -- | -- |
| 150.77 | 0.572 | 8.87 | -0.0685 | 1.47 | -2.24 | -- | -- | 0.891 | 3.53 | 20.22 | 3443 | -- | -- |
| 261.15 | 0.753 | 8.87 | 0.0183 | -- | -2.59 | -- | -0.327 | 0.924 | -- | 19.97 | 2517 | -- | -- |
| 199.06 | 0.661 | 8.79 | 0.867 | 1.5 | -- | 0.402 | -- | 1.24 | 3.47 | -- | -- | -- | -- |
| 199.56 | 0.662 | 8.8 | 0.86 | 1.51 | -- | -- | -- | 1.24 | 3.47 | -- | -- | -- | -- |
| 261.19 | 0.753 | 8.88 | -0.00486 | -- | -2.47 | -- | -- | 0.915 | -- | 20.1 | 2520 | -- | -- |
| 150.86 | 0.572 | 8.87 | -- | 1.47 | -2.19 | -- | -- | 0.898 | 3.53 | 20.24 | 3445 | -- | -- |
| 326.5 | 0.844 | 8.8 | 0.924 | -- | -- | -- | -- | 1.28 | -- | -- | -- | -- | -- |
| 219.06 | 0.692 | 8.82 | -- | 1.52 | -- | -- | -- | 1.14 | 3.47 | -- | -- | -- | -- |
| 261.19 | 0.753 | 8.88 | -- | -- | -2.47 | -- | -- | 0.916 | -- | 20.1 | 2520 | -- | -- |
| 349 | 0.872 | 8.82 | -- | -- | -- | -- | -- | 1.18 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 139.62 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 2 | 139.93 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 3 | 140.40 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 9 | 142.71 | wind | 7 | 43200 | > th | dose independent | rect. | 16 | 14 |
| 10 | 142.82 | wind | 7 | 43200 | < th | dose independent | rect. | 16 | 14 |
| 19 | 143.10 | wind | 7 | 43200 | > th | dose dependent | rect. | 16 | 14 |
| 20 | 143.16 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 28 | 143.61 | wind | 7 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 33 | 143.74 | humidity | 50 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 37 | 143.84 | humidity | 70 | 43200 | > th | dose independent | rect. | 24 | 15 |
| 38 | 143.86 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 39 | 143.86 | humidity | 70 | 43200 | > th | dose independent | rect. | 2 | 12 |
| 49 | 143.99 | humidity | 70 | 43200 | < th | dose independent | rect. | 23 | 16 |
| 52 | 144.03 | humidity | 70 | 43200 | < th | dose independent | rect. | 22 | 18 |
| 67 | 144.13 | humidity | 50 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 70 | 144.17 | wind | 9 | 43200 | < th | dose independent | rect. | 14 | 18 |
| 82 | 144.27 | humidity | 70 | 43200 | > th | dose independent | sin | 4 | NA |
| 123 | 144.46 | humidity | 50 | 43200 | > th | dose independent | rect. | 19 | 20 |
| 126 | 144.46 | humidity | 50 | 43200 | < th | dose dependent | rect. | 19 | 20 |
| 136 | 144.54 | radiation | 20 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 155 | 144.55 | humidity | 50 | 43200 | < th | dose dependent | rect. | 4 | 11 |
| 175 | 144.64 | humidity | 50 | 43200 | < th | dose independent | rect. | 19 | 20 |
| 176 | 144.65 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 186 | 144.73 | humidity | 70 | 43200 | < th | dose independent | sin | 5 | NA |
| 192 | 144.76 | humidity | 60 | 43200 | < th | dose dependent | rect. | 20 | 14 |
| 211 | 144.85 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 7 |
| 234 | 144.95 | humidity | 50 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 242 | 144.99 | humidity | 70 | 43200 | > th | dose independent | rect. | 10 | 22 |
| 253 | 145.02 | wind | 7 | 43200 | > th | dose independent | sin | 13 | NA |
| 258 | 145.03 | wind | 7 | 43200 | < th | dose independent | sin | 13 | NA |
| 259 | 145.03 | humidity | 70 | 43200 | < th | dose independent | rect. | 10 | 22 |
| 273 | 145.05 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 14 |
| 289 | 145.09 | humidity | 50 | 43200 | < th | dose dependent | sin | 6 | NA |
| 304 | 145.12 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 20 |
| 311 | 145.14 | humidity | 70 | 43200 | > th | dose independent | rect. | 10 | 19 |
| 343 | 145.25 | humidity | 70 | 43200 | > th | dose independent | rect. | 3 | 23 |
| 356 | 145.29 | humidity | 70 | 43200 | > th | dose independent | no | NA | NA |
| 368 | 145.32 | humidity | 60 | 43200 | < th | dose dependent | rect. | 7 | 3 |
| 369 | 145.32 | humidity | 50 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 370 | 145.33 | humidity | 50 | 43200 | > th | dose independent | sin | 7 | NA |
| 374 | 145.34 | humidity | 50 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 381 | 145.34 | wind | 7 | 43200 | > th | dose dependent | sin | 13 | NA |
| 388 | 145.36 | humidity | 50 | 43200 | < th | dose independent | sin | 7 | NA |
| 402 | 145.37 | humidity | 90 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 405 | 145.38 | humidity | 50 | 43200 | > th | dose independent | rect. | 3 | 12 |
| 416 | 145.40 | humidity | 80 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 420 | 145.40 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 22 |
| 427 | 145.41 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 22 |
| 433 | 145.43 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 464 | 145.50 | humidity | 90 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 472 | 145.51 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 22 |
| 475 | 145.52 | humidity | 70 | 43200 | < th | dose independent | no | NA | NA |
| 484 | 145.53 | wind | 9 | 43200 | < th | dose independent | rect. | 11 | 22 |
| 486 | 145.53 | humidity | 70 | 43200 | < th | dose independent | rect. | 3 | 23 |
| 490 | 145.53 | wind | 9 | 43200 | > th | dose dependent | rect. | 11 | 21 |
| 532 | 145.60 | wind | 9 | 43200 | < th | dose independent | rect. | 8 | 16 |
| 541 | 145.62 | wind | 9 | 43200 | > th | dose independent | rect. | 8 | 15 |
| 571 | 145.67 | wind | 9 | 43200 | > th | dose independent | rect. | 8 | 13 |
| 580 | 145.67 | humidity | 50 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 622 | 145.73 | wind | 9 | 43200 | > th | dose dependent | sin | 17 | NA |
| 633 | 145.76 | humidity | 60 | 43200 | > th | dose independent | rect. | 20 | 14 |
| 654 | 145.78 | humidity | 90 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 697 | 145.84 | humidity | 50 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 710 | 145.87 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 726 | 145.89 | humidity | 50 | 43200 | < th | dose dependent | rect. | 11 | 23 |
| 732 | 145.90 | humidity | 50 | 43200 | < th | dose dependent | rect. | 4 | 18 |
| 740 | 145.91 | humidity | 50 | 43200 | < th | dose dependent | no | NA | NA |
| 763 | 145.92 | wind | 9 | 43200 | < th | dose independent | rect. | 4 | 19 |
| 768 | 145.93 | wind | 9 | 43200 | < th | dose independent | rect. | 4 | 17 |
| 890 | 146.03 | humidity | 70 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 903 | 146.04 | wind | 9 | 43200 | > th | dose independent | rect. | 8 | 11 |
| 924 | 146.06 | humidity | 80 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 930 | 146.07 | wind | 9 | 43200 | > th | dose independent | rect. | 4 | 19 |
| 995 | 146.15 | humidity | 80 | 43200 | < th | dose independent | rect. | 6 | 1 |