Os05g0549900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Lipid phosphate phosphatase 2 (EC 3.1.3.-) (AtLPP2) (Phosphatidic acid phosphatase 2) (AtPAP2) (Prenyl diphosphate phosphatase).
FiT-DB / Search/ Help/ Sample detail
|
Os05g0549900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Lipid phosphate phosphatase 2 (EC 3.1.3.-) (AtLPP2) (Phosphatidic acid phosphatase 2) (AtPAP2) (Prenyl diphosphate phosphatase).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 211.37 | 0.683 | 7.02 | 2.66 | 1.92 | 0.823 | -0.828 | 7.7 | 0.994 | 2.92 | 29.6 | 4416 | -- | -- |
| 220.86 | 0.692 | 6.83 | 4.21 | 1.86 | 1.77 | -0.743 | -- | 1.3 | 2.83 | 29.4 | 3348 | -- | -- |
| 210.88 | 0.676 | 7 | 2.58 | 1.9 | 0.939 | -- | 7.06 | 1.05 | 2.82 | 28.9 | 4510 | -- | -- |
| 221.97 | 0.694 | 6.81 | 4.29 | 1.91 | 1.88 | -- | -- | 1.35 | 2.69 | 29.27 | 3481 | -- | -- |
| 376.67 | 0.909 | 6.82 | 3.96 | -- | 1.23 | -- | 1.47 | 1.36 | -- | 28.3 | 4766 | -- | -- |
| 320.71 | 0.84 | 6.82 | 3.79 | 1.8 | -- | -1.1 | -- | 1.31 | 3 | -- | -- | -- | -- |
| 324.76 | 0.844 | 6.81 | 3.81 | 1.8 | -- | -- | -- | 1.31 | 2.95 | -- | -- | -- | -- |
| 380.44 | 0.912 | 6.79 | 4.19 | -- | 1.31 | -- | -- | 1.42 | -- | 28.3 | 4766 | -- | -- |
| 677.56 | 1.21 | 6.94 | -- | 1.92 | 0.902 | -- | -- | 0.742 | 2.87 | 30.3 | 3504 | -- | -- |
| 510.52 | 1.06 | 6.81 | 3.89 | -- | -- | -- | -- | 1.36 | -- | -- | -- | -- | -- |
| 707.59 | 1.24 | 6.91 | -- | 1.87 | -- | -- | -- | 0.889 | 2.96 | -- | -- | -- | -- |
| 830.21 | 1.35 | 6.89 | -- | -- | 1.04 | -- | -- | 0.97 | -- | 28.72 | 4810 | -- | -- |
| 909.24 | 1.41 | 6.9 | -- | -- | -- | -- | -- | 0.929 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 200.29 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 13 | 204.08 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 18 | 205.30 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 2 | 8 |
| 20 | 205.32 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 21 | 205.34 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 21 | 13 |
| 30 | 205.44 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 21 |
| 32 | 205.49 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 33 | 205.53 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 49 | 205.63 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 21 |
| 56 | 205.84 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 60 | 206.00 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 61 | 206.04 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 67 | 206.30 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 18 | 16 |
| 133 | 207.41 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 138 | 207.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 140 | 207.62 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 22 |
| 141 | 207.63 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 156 | 207.65 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 160 | 207.65 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 21 | 19 |
| 161 | 207.66 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 169 | 207.67 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 8 |
| 187 | 207.78 | temperature | 30.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 203 | 207.84 | temperature | 30.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 205 | 207.86 | temperature | 30.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 213 | 207.94 | temperature | 30.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 233 | 208.03 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 4 |
| 235 | 208.05 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 240 | 208.10 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 18 | 21 |
| 245 | 208.18 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 251 | 208.23 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 8 | 7 |
| 312 | 208.63 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 313 | 208.63 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 12 | 3 |
| 344 | 208.79 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 359 | 208.86 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 4 | 18 |
| 374 | 208.87 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |
| 406 | 208.87 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 6 | 23 |
| 407 | 208.87 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 23 |
| 430 | 208.88 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 19 |
| 435 | 208.88 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 21 |
| 466 | 208.91 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |
| 608 | 209.05 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 9 |
| 620 | 209.07 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 13 |
| 692 | 209.30 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 696 | 209.33 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 19 | 3 |
| 805 | 209.72 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 806 | 209.72 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 19 | 3 |
| 822 | 209.77 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 6 | 16 |
| 905 | 210.00 | temperature | 30.0 | 14400 | > th | dose dependent | no | NA | NA |