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Os05g0549000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Epsin, N-terminal domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.3 (0.0158) R2 : 0.608
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.03 (0.0401) R2dC : 0.573 R2C : 0.563
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.211 (0.0333) R2dN8 : 0.0448 R2N8 : 0.0343
σ : 0.298
deviance : 40.67
__
_____
C
peak time of C : 8.31
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
35.1 0.278 12.3 0.258 0.951 -0.484 0.291 -0.00841 0.216 6.3 11.9 106 -- --
35.09 0.276 12.3 0.258 0.962 -0.49 0.295 -- 0.218 6.28 11.98 116 -- --
35.3 0.277 12.3 0.26 0.953 -0.483 -- -0.0167 0.215 6.29 12 106 -- --
35.29 0.277 12.3 0.26 0.967 -0.493 -- -- 0.217 6.26 11.98 116 -- --
69.14 0.387 12.4 0.257 -- -0.509 -- 0.074 0.195 -- 6.97 6 -- --
38.53 0.291 12.3 0.264 1.03 -- 0.245 -- 0.242 8.34 -- -- -- --
38.72 0.291 12.3 0.272 1.03 -- -- -- 0.242 8.33 -- -- -- --
68.17 0.385 12.3 0.29 -- -0.544 -- -- 0.239 -- 7.06 2 -- --
37.04 0.283 12.3 -- 0.977 -0.513 -- -- 0.188 6.2 12.79 119 -- --
97.65 0.462 12.3 0.278 -- -- -- -- 0.253 -- -- -- -- --
40.67 0.298 12.3 -- 1.03 -- -- -- 0.211 8.31 -- -- -- --
70.37 0.391 12.3 -- -- -0.541 -- -- 0.206 -- 6.78 2 -- --
99.69 0.466 12.3 -- -- -- -- -- 0.222 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.12 temperature 15 10 > th dose dependent rect. 7 19
26 34.18 radiation 10 90 < th dose dependent rect. 21 23
49 34.51 temperature 20 10 > th dose independent rect. 7 19
54 34.55 temperature 30 30 < th dose dependent rect. 13 18
63 34.59 radiation 10 43200 < th dose dependent rect. 21 6
67 34.61 humidity 80 10 > th dose independent rect. 2 18
73 34.67 radiation 20 90 < th dose dependent rect. 12 19
78 34.71 temperature 15 30 > th dose dependent rect. 20 6
100 34.85 radiation 10 90 < th dose dependent rect. 23 21
110 34.89 temperature 30 10 < th dose dependent rect. 2 18
115 34.90 humidity 60 10 > th dose dependent rect. 2 18
147 34.99 radiation 1 30 > th dose independent rect. 7 12
162 35.01 radiation 10 10 < th dose dependent sin 1 NA
169 35.03 radiation 10 10 < th dose dependent rect. 2 18
174 35.04 humidity 50 10 > th dose dependent rect. 13 7
180 35.04 radiation 20 90 < th dose dependent rect. 12 21
181 35.05 temperature 30 10 < th dose dependent rect. 12 8
188 35.06 humidity 80 30 > th dose independent rect. 2 14
191 35.06 temperature 15 30 > th dose dependent rect. 20 21
195 35.07 radiation 10 90 < th dose dependent sin 1 NA
196 35.07 radiation 1 90 < th dose dependent rect. 5 14
208 35.09 temperature 20 10 > th dose independent rect. 20 6
227 35.11 temperature 10 90 > th dose dependent rect. 19 23
230 35.12 temperature 20 30 > th dose independent rect. 20 17
233 35.13 humidity 80 30 > th dose independent sin 2 NA
236 35.13 temperature 10 90 > th dose dependent rect. 20 15
239 35.14 radiation 1 270 > th dose independent rect. 17 22
266 35.17 humidity 60 10 > th dose dependent rect. 11 9
279 35.18 radiation 1 90 < th dose independent rect. 5 14
287 35.19 temperature 30 30 < th dose dependent rect. 17 14
309 35.21 temperature 30 10 < th dose dependent rect. 23 21
328 35.23 radiation 10 90 < th dose independent rect. 12 19
355 35.25 radiation 1 270 < th dose independent rect. 22 21
364 35.26 temperature 15 30 > th dose dependent rect. 20 17
369 35.26 radiation 10 90 < th dose dependent rect. 9 22
373 35.27 temperature 15 270 > th dose independent rect. 4 22
388 35.28 humidity 70 30 > th dose independent rect. 13 7
396 35.29 radiation 1 90 > th dose independent sin 1 NA
425 35.32 radiation 1 90 < th dose independent sin 1 NA
444 35.34 radiation 10 90 < th dose dependent no NA NA
469 35.37 temperature 15 90 > th dose independent rect. 20 15
478 35.37 humidity 70 10 > th dose dependent sin 1 NA
479 35.37 radiation 10 10 < th dose dependent no NA NA
495 35.38 humidity 70 30 > th dose dependent rect. 23 21
502 35.39 temperature 15 270 > th dose dependent rect. 20 2
503 35.39 temperature 15 270 > th dose dependent rect. 18 6
513 35.39 radiation 10 10 < th dose dependent rect. 15 23
515 35.40 humidity 80 30 < th dose independent rect. 7 10
523 35.40 radiation 10 10 < th dose dependent rect. 6 14
548 35.42 radiation 10 30 < th dose independent rect. 2 18
560 35.42 radiation 10 90 < th dose dependent rect. 15 23
562 35.43 temperature 30 30 < th dose independent rect. 13 7
576 35.43 temperature 30 10 < th dose dependent rect. 1 23
610 35.46 temperature 30 10 < th dose dependent rect. 9 23
633 35.48 radiation 1 90 < th dose independent rect. 7 12
652 35.49 radiation 10 90 > th dose independent no NA NA
877 35.57 temperature 30 10 < th dose dependent no NA NA
891 35.57 temperature 30 10 < th dose dependent rect. 17 23
915 35.58 radiation 10 10 < th dose dependent rect. 17 23
916 35.59 humidity 80 30 < th dose independent sin 2 NA
928 35.60 radiation 1 270 < th dose independent sin 3 NA
939 35.60 temperature 30 10 < th dose dependent rect. 15 23
943 35.61 radiation 10 90 > th dose independent rect. 15 23