Os05g0548700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1618 domain containing protein.
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Os05g0548700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1618 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 250.79 | 0.744 | 3.85 | 0.287 | 0.275 | -1.15 | -0.443 | 2.44 | 0.587 | 5.79 | 18 | 4903 | -- | -- |
| 251.21 | 0.738 | 3.89 | 0.0132 | 0.334 | -1.49 | -0.44 | -- | 0.638 | 5.76 | 1.688 | 11140 | -- | -- |
| 251.25 | 0.738 | 3.85 | 0.285 | 0.276 | -1.15 | -- | 2.45 | 0.587 | 5.46 | 18 | 4947 | -- | -- |
| 251.65 | 0.739 | 3.9 | -0.0111 | 0.325 | -1.5 | -- | -- | 0.634 | 5.44 | 2.925 | 11129 | -- | -- |
| 255.12 | 0.744 | 3.85 | 0.305 | -- | -1.16 | -- | 2.45 | 0.594 | -- | 18 | 4918 | -- | -- |
| 287.37 | 0.795 | 4 | -0.934 | 0.294 | -- | -0.481 | -- | 0.15 | 6.25 | -- | -- | -- | -- |
| 287.94 | 0.795 | 4 | -0.94 | 0.292 | -- | -- | -- | 0.151 | 6.13 | -- | -- | -- | -- |
| 255.85 | 0.745 | 3.86 | 0.255 | -- | -1.58 | -- | -- | 0.809 | -- | 12.13 | 16413 | -- | -- |
| 251.66 | 0.739 | 3.89 | -- | 0.324 | -1.5 | -- | -- | 0.636 | 5.44 | 7.69 | 11130 | -- | -- |
| 292.37 | 0.799 | 4.01 | -0.932 | -- | -- | -- | -- | 0.158 | -- | -- | -- | -- | -- |
| 311.24 | 0.825 | 3.98 | -- | 0.279 | -- | -- | -- | 0.256 | 6.3 | -- | -- | -- | -- |
| 256.63 | 0.746 | 3.88 | -- | -- | -1.4 | -- | -- | 0.722 | -- | 11.5 | 16408 | -- | -- |
| 315.28 | 0.829 | 3.99 | -- | -- | -- | -- | -- | 0.261 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 243.15 | humidity | 80 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 2 | 243.18 | humidity | 80 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 3 | 243.23 | humidity | 80 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 8 | 243.70 | humidity | 90 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 33 | 244.39 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 4 |
| 35 | 244.46 | humidity | 90 | 14400 | < th | dose independent | sin | 16 | NA |
| 46 | 244.57 | humidity | 80 | 14400 | > th | dose dependent | rect. | 17 | 8 |
| 54 | 244.65 | humidity | 90 | 14400 | > th | dose independent | rect. | 16 | 10 |
| 95 | 245.16 | humidity | 80 | 14400 | > th | dose dependent | sin | 16 | NA |
| 117 | 245.34 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 158 | 245.69 | humidity | 90 | 14400 | > th | dose independent | sin | 16 | NA |
| 184 | 245.82 | humidity | 70 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 202 | 245.96 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 221 | 246.04 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 235 | 246.20 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 264 | 246.37 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 266 | 246.39 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 282 | 246.45 | temperature | 25 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 290 | 246.51 | temperature | 10 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 294 | 246.54 | radiation | 20 | 4320 | < th | dose independent | rect. | 15 | 18 |
| 296 | 246.56 | radiation | 1 | 14400 | > th | dose independent | sin | 12 | NA |
| 357 | 246.73 | radiation | 1 | 14400 | < th | dose independent | sin | 12 | NA |
| 444 | 246.98 | radiation | 20 | 4320 | < th | dose independent | rect. | 17 | 16 |
| 460 | 247.02 | radiation | 20 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 461 | 247.02 | radiation | 20 | 4320 | < th | dose independent | rect. | 22 | 11 |
| 470 | 247.04 | radiation | 20 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 477 | 247.05 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 479 | 247.05 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 480 | 247.05 | radiation | 20 | 4320 | < th | dose independent | rect. | 24 | 9 |
| 495 | 247.07 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 10 |
| 502 | 247.08 | humidity | 80 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 512 | 247.11 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 746 | 247.52 | radiation | 1 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 842 | 247.63 | humidity | 90 | 14400 | < th | dose independent | no | NA | NA |
| 849 | 247.65 | radiation | 1 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 857 | 247.66 | humidity | 80 | 14400 | > th | dose dependent | rect. | 16 | 22 |
| 891 | 247.71 | humidity | 90 | 14400 | < th | dose independent | rect. | 1 | 23 |
| 896 | 247.71 | humidity | 80 | 14400 | > th | dose dependent | rect. | 1 | 22 |
| 923 | 247.75 | radiation | 1 | 14400 | > th | dose independent | no | NA | NA |
| 926 | 247.75 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 15 |
| 990 | 247.77 | humidity | 80 | 14400 | > th | dose independent | sin | 21 | NA |
| 1000 | 247.78 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 23 |