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Os05g0548400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.22 (0.0222) R2 : 0.293
β1 : -1.1 (0.0812) R2dD : 0.295 R2D : 0.293
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0119 (0.0473) R2dN8 : 0.000132 R2N8 : -0.00199
σ : 0.416
deviance : 79.25
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
62.55 0.372 8.24 -1.27 0.217 -0.664 -0.58 -0.455 -0.125 19.2 1014 9365 -- --
63.31 0.371 8.26 -1.36 0.204 -0.604 -0.562 -- -0.135 19.3 1014 9383 -- --
63.26 0.37 8.24 -1.3 0.208 -0.857 -- -0.885 -0.144 19.9 1015 9397 -- --
64.12 0.373 8.26 -1.37 0.213 -0.614 -- -- -0.153 19.8 1014 9380 -- --
65.64 0.377 8.21 -1.33 -- -1.03 -- -1.24 -0.125 -- 1015 9396 -- --
75.91 0.408 8.23 -1.11 0.217 -- -0.568 -- -0.00715 19.3 -- -- -- --
76.69 0.41 8.23 -1.1 0.217 -- -- -- -0.00911 20 -- -- -- --
66.64 0.38 8.26 -1.37 -- -0.614 -- -- -0.154 -- 1014 9393 -- --
105.01 0.477 8.19 -- 0.2 -0.233 -- -- 0.116 20 1013 4119 -- --
79.25 0.416 8.22 -1.1 -- -- -- -- -0.0119 -- -- -- -- --
108.46 0.487 8.2 -- 0.225 -- -- -- 0.113 19.6 -- -- -- --
105.89 0.479 8.21 -- -- -0.556 -- -- 0.0858 -- 1014 3720 -- --
111.17 0.492 8.2 -- -- -- -- -- 0.11 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 54.32 temperature 10.0 270 > th dose dependent rect. 19 17
20 57.77 temperature 15.0 30 > th dose dependent rect. 20 19
25 57.90 temperature 10.0 270 > th dose dependent rect. 7 5
34 58.23 temperature 15.0 270 > th dose independent rect. 7 18
35 58.24 wind 1.0 270 > th dose independent rect. 13 17
37 58.29 temperature 10.0 10 > th dose dependent rect. 9 6
44 58.86 temperature 15.0 270 > th dose independent rect. 19 17
46 58.97 radiation 1.0 270 > th dose independent rect. 7 6
48 58.99 temperature 15.0 270 > th dose independent rect. 7 6
52 59.08 wind 7.0 270 < th dose independent rect. 7 6
55 59.13 temperature 10.0 270 > th dose dependent rect. 18 8
75 59.40 temperature 10.0 90 > th dose dependent rect. 9 17
77 59.42 temperature 30.0 270 < th dose dependent rect. 1 6
78 59.45 temperature 15.0 270 > th dose independent rect. 17 9
79 59.49 wind 9.0 270 < th dose dependent rect. 7 6
87 59.63 temperature 10.0 10 > th dose dependent rect. 9 17
102 59.86 atmosphere 995.0 90 > th dose independent rect. 8 7
106 59.88 radiation 10.0 270 < th dose independent rect. 17 9
110 59.89 precipitation 0.1 90 < th dose independent rect. 15 17
112 59.89 precipitation 0.1 90 < th dose dependent rect. 15 17
118 59.93 humidity 90.0 90 < th dose independent rect. 9 6
119 59.93 precipitation 0.1 270 < th dose independent rect. 2 15
120 59.93 precipitation 0.1 270 < th dose dependent rect. 2 15
127 60.01 precipitation 0.1 270 < th dose independent rect. 13 18
129 60.01 precipitation 0.1 270 < th dose dependent rect. 13 18
132 60.02 precipitation 0.1 90 < th dose independent rect. 8 7
134 60.02 precipitation 0.1 90 < th dose dependent rect. 8 7
137 60.06 wind 9.0 270 < th dose independent rect. 17 9
143 60.07 temperature 10.0 270 > th dose independent rect. 2 15
144 60.07 atmosphere 1015.0 270 < th dose independent rect. 2 15
149 60.10 radiation 40.0 270 < th dose dependent rect. 17 9
152 60.12 wind 9.0 10 < th dose independent rect. 9 6
154 60.12 atmosphere 1015.0 90 < th dose independent rect. 8 7
155 60.12 temperature 10.0 90 > th dose independent rect. 15 17
156 60.13 humidity 50.0 270 > th dose independent rect. 7 6
157 60.13 humidity 90.0 10 < th dose independent rect. 9 6
160 60.14 humidity 90.0 270 < th dose independent rect. 8 3
165 60.19 humidity 50.0 270 > th dose independent rect. 17 9
180 60.26 radiation 40.0 90 < th dose independent rect. 15 17
181 60.26 temperature 10.0 270 > th dose independent rect. 13 18
195 60.33 precipitation 0.1 270 < th dose independent rect. 17 9
196 60.33 precipitation 0.1 270 < th dose dependent rect. 17 9
198 60.34 radiation 1.0 10 > th dose independent rect. 9 6
213 60.44 atmosphere 995.0 270 > th dose independent rect. 13 18
219 60.45 wind 9.0 270 < th dose independent rect. 13 18
221 60.47 temperature 10.0 10 > th dose independent rect. 9 6
223 60.47 atmosphere 995.0 10 > th dose independent rect. 9 6
224 60.47 atmosphere 1015.0 10 < th dose independent rect. 9 6
225 60.47 precipitation 0.1 10 < th dose independent rect. 9 6
226 60.47 temperature 10.0 10 > th dose independent rect. 15 18
227 60.47 precipitation 0.1 10 < th dose dependent rect. 9 6
261 60.57 wind 9.0 270 < th dose dependent rect. 8 3
264 60.58 wind 9.0 90 < th dose independent rect. 15 17
282 60.63 wind 7.0 90 < th dose independent rect. 9 18
288 60.66 wind 1.0 90 > th dose independent rect. 8 7
290 60.68 temperature 10.0 1440 > th dose independent rect. 10 6
293 60.68 temperature 10.0 1440 > th dose independent rect. 16 18
302 60.71 wind 9.0 90 < th dose dependent rect. 9 6
313 60.76 atmosphere 995.0 270 > th dose independent rect. 2 15
315 60.78 wind 1.0 270 > th dose independent rect. 2 15
327 60.87 wind 1.0 10 > th dose independent rect. 9 6
328 60.87 atmosphere 995.0 90 > th dose independent rect. 15 17
335 60.94 radiation 1.0 270 > th dose independent rect. 8 3
350 60.98 wind 9.0 270 < th dose independent rect. 2 15
351 60.99 atmosphere 995.0 270 > th dose independent rect. 17 9
370 61.08 wind 9.0 270 < th dose independent rect. 7 18
373 61.09 wind 1.0 270 > th dose independent rect. 1 6
400 61.22 precipitation 0.1 270 < th dose independent rect. 1 6
401 61.22 precipitation 0.1 270 < th dose dependent rect. 1 6
421 61.28 wind 7.0 270 < th dose independent rect. 1 6
467 61.41 temperature 10.0 270 > th dose independent rect. 1 6
469 61.41 temperature 30.0 270 < th dose independent rect. 1 6
470 61.41 humidity 50.0 270 > th dose independent rect. 1 6
472 61.41 atmosphere 995.0 270 > th dose independent rect. 1 6
473 61.41 atmosphere 1015.0 270 < th dose independent rect. 1 6
474 61.41 radiation 40.0 270 < th dose independent rect. 1 6
491 61.47 atmosphere 995.0 10 > th dose independent rect. 15 18
505 61.53 temperature 30.0 270 < th dose independent rect. 18 8
514 61.58 humidity 50.0 4320 > th dose independent rect. 4 6
525 61.61 wind 1.0 270 > th dose independent rect. 12 7
569 61.71 humidity 50.0 270 > th dose independent rect. 7 18
570 61.71 precipitation 0.1 270 < th dose independent rect. 7 18
571 61.71 precipitation 0.1 270 < th dose dependent rect. 7 18
574 61.73 wind 7.0 270 < th dose independent rect. 19 17
617 61.85 radiation 1.0 270 > th dose independent rect. 17 21
627 61.87 atmosphere 995.0 10 > th dose dependent rect. 15 18
653 61.94 radiation 40.0 270 < th dose dependent rect. 1 6
656 61.95 wind 1.0 270 > th dose independent rect. 2 4
664 61.96 temperature 15.0 10 > th dose independent rect. 9 17
665 61.96 precipitation 0.1 270 < th dose independent rect. 11 21
667 61.96 wind 9.0 270 < th dose dependent rect. 7 18
668 61.96 precipitation 0.1 270 < th dose dependent rect. 11 21
703 62.02 atmosphere 995.0 90 > th dose dependent rect. 15 17
713 62.04 wind 9.0 270 < th dose independent rect. 6 21
735 62.07 precipitation 0.1 270 < th dose independent rect. 8 3
742 62.07 precipitation 0.1 270 < th dose dependent rect. 8 3
755 62.11 atmosphere 995.0 270 > th dose dependent rect. 1 6
776 62.19 atmosphere 995.0 270 > th dose independent rect. 8 3
777 62.19 atmosphere 1015.0 270 < th dose independent rect. 8 3
781 62.19 temperature 10.0 270 > th dose independent rect. 11 21
821 62.27 temperature 15.0 10 > th dose independent rect. 20 19
828 62.29 humidity 50.0 270 > th dose independent rect. 8 3
831 62.29 precipitation 0.1 270 < th dose independent rect. 12 7
834 62.29 precipitation 0.1 270 < th dose dependent rect. 12 7
855 62.33 wind 7.0 10 < th dose independent rect. 9 18
865 62.34 temperature 10.0 270 > th dose independent rect. 12 7
872 62.34 atmosphere 1015.0 270 < th dose independent rect. 12 7
877 62.34 atmosphere 995.0 270 > th dose independent rect. 19 17
895 62.38 atmosphere 995.0 270 > th dose independent rect. 12 7
946 62.45 radiation 1.0 270 < th dose dependent rect. 3 14
969 62.47 radiation 1.0 270 < th dose independent rect. 3 13
975 62.48 atmosphere 1015.0 270 < th dose independent rect. 7 18
987 62.49 humidity 50.0 10 > th dose independent rect. 15 18
990 62.50 temperature 30.0 270 < th dose independent rect. 7 6
998 62.52 atmosphere 1015.0 10 < th dose independent rect. 15 18