Os05g0548300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Multidrug resistance protein 1 homolog.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0548300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Multidrug resistance protein 1 homolog.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.55 | 0.496 | 6.04 | 0.507 | 1.16 | -1.08 | -0.233 | 3.74 | 0.177 | 21.6 | 23.61 | 1268 | -- | -- |
| 118.08 | 0.506 | 6.13 | -0.425 | 1.14 | -0.755 | -0.115 | -- | 0.051 | 21.3 | 22.55 | 9219 | -- | -- |
| 111.75 | 0.492 | 6.05 | 0.5 | 1.16 | -1.08 | -- | 3.69 | 0.172 | 21.6 | 23.67 | 1268 | -- | -- |
| 118.11 | 0.506 | 6.13 | -0.407 | 1.14 | -0.757 | -- | -- | 0.0554 | 21.3 | 22.5 | 9228 | -- | -- |
| 186.08 | 0.635 | 6 | 0.598 | -- | -0.962 | -- | 3.66 | 0.214 | -- | 23.3 | 1432 | -- | -- |
| 136.77 | 0.548 | 6.2 | -0.771 | 1.1 | -- | -0.158 | -- | -0.241 | 21.2 | -- | -- | -- | -- |
| 136.86 | 0.548 | 6.2 | -0.765 | 1.1 | -- | -- | -- | -0.24 | 21.2 | -- | -- | -- | -- |
| 190.41 | 0.645 | 6.14 | -0.579 | -- | -0.907 | -- | -- | -0.105 | -- | 17.93 | 11605 | -- | -- |
| 119.61 | 0.509 | 6.1 | -- | 1.14 | -0.954 | -- | -- | 0.249 | 21.4 | 21.06 | 17099 | -- | -- |
| 206.99 | 0.672 | 6.17 | -0.761 | -- | -- | -- | -- | -0.246 | -- | -- | -- | -- | -- |
| 152.29 | 0.577 | 6.18 | -- | 1.1 | -- | -- | -- | -0.155 | 21.2 | -- | -- | -- | -- |
| 191.31 | 0.644 | 6.07 | -- | -- | -0.945 | -- | -- | 0.172 | -- | 19.22 | 18811 | -- | -- |
| 222.27 | 0.696 | 6.15 | -- | -- | -- | -- | -- | -0.161 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 109.19 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 4 | 109.54 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 6 |
| 5 | 109.57 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 8 |
| 6 | 109.61 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 7 |
| 7 | 109.65 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 10 | 109.75 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 4 |
| 22 | 109.88 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 31 | 110.01 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 46 | 110.17 | humidity | 90.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 50 | 110.19 | humidity | 90.0 | 43200 | > th | dose independent | sin | 11 | NA |
| 69 | 110.36 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 14 |
| 189 | 111.08 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 230 | 111.30 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 231 | 111.30 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 19 |
| 309 | 111.66 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 312 | 111.67 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 16 | NA |
| 334 | 111.78 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 349 | 111.84 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 17 | 22 |
| 360 | 111.88 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 395 | 112.00 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 18 |
| 397 | 112.01 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 417 | 112.06 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 445 | 112.15 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 464 | 112.19 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 14 | 23 |
| 476 | 112.23 | humidity | 80.0 | 43200 | > th | dose dependent | no | NA | NA |
| 479 | 112.23 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 506 | 112.28 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 552 | 112.39 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 17 |
| 562 | 112.43 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 10 |
| 564 | 112.43 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 13 |
| 597 | 112.48 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 631 | 112.57 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 677 | 112.66 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 679 | 112.66 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 691 | 112.67 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 19 |
| 694 | 112.67 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 2 | 23 |
| 715 | 112.72 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 718 | 112.73 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 6 |
| 726 | 112.73 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 12 |
| 745 | 112.75 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 14 |
| 755 | 112.77 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 795 | 112.84 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 1 | 5 |
| 813 | 112.88 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 870 | 112.98 | humidity | 60.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 873 | 112.98 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 12 | NA |
| 909 | 113.04 | humidity | 60.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 992 | 113.19 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 7 |