Os05g0546400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0546400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 604.97 | 1.16 | 6.32 | 1.76 | 0.472 | 4.16 | 1.78 | 0.953 | 0.85 | 21.2 | 4.7 | 564 | -- | -- |
| 605.19 | 1.15 | 6.31 | 1.74 | 0.482 | 3.97 | 1.84 | -- | 0.857 | 21.2 | 4.671 | 563 | -- | -- |
| 615.16 | 1.16 | 6.33 | 1.72 | 0.449 | 4.25 | -- | 2.3 | 0.85 | 20.9 | 4.745 | 563 | -- | -- |
| 617.15 | 1.16 | 6.31 | 1.66 | 0.512 | 3.87 | -- | -- | 0.867 | 20.9 | 4.767 | 563 | -- | -- |
| 624.25 | 1.16 | 6.33 | 1.79 | -- | 4.45 | -- | 2.54 | 0.82 | -- | 4.28 | 563 | -- | -- |
| 714.46 | 1.25 | 6.36 | 1.03 | 1.12 | -- | 0.853 | -- | 0.735 | 20.7 | -- | -- | -- | -- |
| 716.76 | 1.25 | 6.36 | 1 | 1.13 | -- | -- | -- | 0.736 | 20.5 | -- | -- | -- | -- |
| 627.24 | 1.17 | 6.3 | 1.72 | -- | 3.98 | -- | -- | 0.823 | -- | 4.132 | 563 | -- | -- |
| 684.62 | 1.22 | 6.34 | -- | 0.744 | 3.89 | -- | -- | 0.742 | 21.1 | 5.775 | 534 | -- | -- |
| 787.82 | 1.31 | 6.33 | 0.996 | -- | -- | -- | -- | 0.725 | -- | -- | -- | -- | -- |
| 743.12 | 1.28 | 6.38 | -- | 1.12 | -- | -- | -- | 0.624 | 20.6 | -- | -- | -- | -- |
| 699.89 | 1.23 | 6.35 | -- | -- | 3.16 | -- | -- | 0.63 | -- | 4.033 | 564 | -- | -- |
| 813.98 | 1.33 | 6.35 | -- | -- | -- | -- | -- | 0.615 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 610.36 | wind | 5.0 | 720 | > th | dose dependent | rect. | 20 | 21 |
| 11 | 614.71 | wind | 7.0 | 720 | < th | dose independent | rect. | 8 | 17 |
| 18 | 615.58 | wind | 5.0 | 270 | > th | dose dependent | rect. | 13 | 22 |
| 23 | 616.49 | wind | 7.0 | 720 | > th | dose independent | rect. | 14 | 22 |
| 26 | 617.31 | wind | 7.0 | 720 | < th | dose independent | rect. | 7 | 23 |
| 27 | 617.36 | wind | 5.0 | 720 | > th | dose dependent | rect. | 5 | 23 |
| 30 | 617.45 | wind | 5.0 | 720 | > th | dose dependent | no | NA | NA |
| 31 | 617.46 | wind | 5.0 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 42 | 617.77 | wind | 5.0 | 720 | > th | dose dependent | rect. | 24 | 23 |
| 60 | 618.31 | wind | 7.0 | 720 | > th | dose independent | rect. | 19 | 22 |
| 74 | 618.94 | wind | 7.0 | 720 | < th | dose independent | rect. | 21 | 23 |
| 119 | 620.34 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 121 | 620.36 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 122 | 620.36 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 139 | 620.77 | wind | 5.0 | 90 | > th | dose independent | rect. | 11 | 22 |
| 155 | 621.25 | wind | 7.0 | 720 | < th | dose independent | rect. | 15 | 23 |
| 162 | 621.42 | wind | 7.0 | 720 | < th | dose independent | rect. | 13 | 23 |
| 165 | 621.47 | wind | 5.0 | 270 | > th | dose independent | rect. | 9 | 23 |
| 182 | 621.99 | wind | 5.0 | 90 | > th | dose dependent | sin | 14 | NA |
| 192 | 622.28 | wind | 7.0 | 720 | > th | dose independent | no | NA | NA |
| 193 | 622.28 | wind | 7.0 | 720 | > th | dose independent | rect. | 7 | 22 |
| 205 | 622.42 | wind | 7.0 | 720 | > th | dose independent | rect. | 24 | 23 |
| 206 | 622.48 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 214 | 622.53 | wind | 7.0 | 720 | > th | dose independent | rect. | 4 | 23 |
| 217 | 622.55 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 10 | 8 |
| 226 | 622.61 | wind | 7.0 | 720 | < th | dose independent | no | NA | NA |
| 248 | 622.87 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 10 | 11 |
| 271 | 623.18 | wind | 7.0 | 720 | < th | dose independent | rect. | 2 | 23 |
| 279 | 623.29 | wind | 5.0 | 90 | < th | dose independent | rect. | 21 | 23 |
| 315 | 623.77 | wind | 7.0 | 1440 | > th | dose dependent | sin | 21 | NA |
| 318 | 623.81 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 330 | 623.90 | wind | 7.0 | 720 | < th | dose independent | rect. | 17 | 23 |
| 345 | 624.02 | wind | 5.0 | 90 | < th | dose independent | no | NA | NA |
| 361 | 624.16 | wind | 5.0 | 90 | > th | dose independent | no | NA | NA |
| 400 | 624.50 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 409 | 624.55 | wind | 7.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 419 | 624.59 | wind | 7.0 | 720 | < th | dose independent | rect. | 4 | 23 |
| 482 | 625.00 | wind | 5.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 597 | 626.05 | wind | 7.0 | 1440 | > th | dose independent | rect. | 10 | 12 |
| 651 | 626.37 | wind | 9.0 | 720 | < th | dose independent | sin | 9 | NA |
| 657 | 626.39 | wind | 9.0 | 1440 | > th | dose independent | rect. | 10 | 8 |
| 676 | 626.51 | wind | 5.0 | 90 | > th | dose independent | rect. | 1 | 23 |
| 711 | 626.65 | wind | 7.0 | 1440 | > th | dose independent | rect. | 8 | 13 |
| 730 | 626.71 | wind | 7.0 | 1440 | > th | dose independent | sin | 21 | NA |
| 780 | 626.93 | wind | 7.0 | 270 | < th | dose independent | sin | 11 | NA |
| 840 | 627.23 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 849 | 627.32 | wind | 7.0 | 270 | > th | dose independent | sin | 11 | NA |
| 880 | 627.45 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 15 |
| 887 | 627.48 | wind | 7.0 | 1440 | < th | dose independent | rect. | 10 | 12 |
| 910 | 627.57 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 19 |
| 974 | 627.89 | wind | 9.0 | 1440 | < th | dose independent | rect. | 10 | 8 |
| 995 | 627.90 | wind | 9.0 | 1440 | < th | dose independent | rect. | 19 | 23 |