Os05g0545700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0545700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 438.46 | 0.984 | 3.28 | 0.9 | 0.303 | 2.02 | 0.0197 | -5.89 | 0.415 | 21 | 10.1 | 602 | -- | -- |
| 441.38 | 0.978 | 3.29 | 0.974 | 0.295 | 3.32 | 0.0407 | -- | 0.401 | 20.9 | 10.12 | 605 | -- | -- |
| 437.41 | 0.974 | 3.28 | 0.881 | 0.321 | 2.09 | -- | -6.47 | 0.406 | 21.1 | 10.23 | 588 | -- | -- |
| 440.79 | 0.978 | 3.31 | 0.934 | 0.297 | 3.44 | -- | -- | 0.399 | 20.8 | 10.2 | 586 | -- | -- |
| 442.97 | 0.98 | 3.27 | 0.889 | -- | 2.25 | -- | -6.17 | 0.409 | -- | 10.22 | 586 | -- | -- |
| 494.9 | 1.04 | 3.33 | 0.658 | 0.417 | -- | -0.41 | -- | 0.293 | 20.3 | -- | -- | -- | -- |
| 495.36 | 1.04 | 3.33 | 0.668 | 0.415 | -- | -- | -- | 0.292 | 20.6 | -- | -- | -- | -- |
| 445.73 | 0.983 | 3.3 | 0.944 | -- | 3.57 | -- | -- | 0.394 | -- | 10.2 | 586 | -- | -- |
| 463.05 | 1 | 3.33 | -- | 0.309 | 3.04 | -- | -- | 0.287 | 21 | 10.26 | 605 | -- | -- |
| 505.06 | 1.05 | 3.32 | 0.667 | -- | -- | -- | -- | 0.289 | -- | -- | -- | -- | -- |
| 507.13 | 1.05 | 3.35 | -- | 0.413 | -- | -- | -- | 0.218 | 20.7 | -- | -- | -- | -- |
| 468.44 | 1.01 | 3.32 | -- | -- | 3.17 | -- | -- | 0.288 | -- | 10.25 | 596 | -- | -- |
| 516.8 | 1.06 | 3.34 | -- | -- | -- | -- | -- | 0.215 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 436.09 | wind | 9.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 2 | 436.31 | wind | 9.0 | 270 | < th | dose independent | sin | 10 | NA |
| 4 | 437.56 | wind | 9.0 | 270 | > th | dose independent | sin | 10 | NA |
| 12 | 441.89 | wind | 7.0 | 90 | > th | dose dependent | rect. | 17 | 9 |
| 13 | 441.93 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 21 | 6 |
| 14 | 441.93 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 21 | 6 |
| 16 | 442.37 | wind | 9.0 | 720 | > th | dose dependent | rect. | 22 | 20 |
| 17 | 442.39 | wind | 9.0 | 720 | > th | dose dependent | rect. | 9 | 9 |
| 30 | 442.46 | wind | 7.0 | 90 | > th | dose independent | rect. | 17 | 9 |
| 35 | 442.51 | wind | 9.0 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 47 | 442.76 | wind | 9.0 | 720 | > th | dose dependent | rect. | 9 | 12 |
| 66 | 442.79 | wind | 9.0 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 125 | 442.89 | wind | 9.0 | 720 | > th | dose dependent | no | NA | NA |
| 170 | 443.03 | wind | 9.0 | 720 | > th | dose dependent | sin | 23 | NA |
| 171 | 443.03 | wind | 9.0 | 270 | > th | dose dependent | rect. | 17 | 18 |
| 178 | 443.33 | wind | 9.0 | 720 | < th | dose independent | rect. | 17 | 23 |
| 216 | 444.22 | wind | 9.0 | 720 | > th | dose independent | rect. | 19 | 22 |
| 235 | 444.82 | wind | 9.0 | 720 | > th | dose independent | rect. | 9 | 8 |
| 252 | 444.89 | wind | 9.0 | 720 | > th | dose independent | rect. | 14 | 23 |
| 268 | 445.06 | wind | 9.0 | 720 | > th | dose independent | sin | 0 | NA |
| 270 | 445.10 | wind | 9.0 | 720 | > th | dose independent | rect. | 9 | 14 |
| 311 | 445.18 | wind | 9.0 | 720 | > th | dose independent | rect. | 22 | 23 |
| 318 | 445.22 | wind | 9.0 | 720 | > th | dose independent | no | NA | NA |
| 319 | 445.22 | wind | 9.0 | 720 | < th | dose independent | sin | 21 | NA |
| 362 | 445.24 | wind | 9.0 | 720 | > th | dose independent | rect. | 16 | 23 |
| 386 | 445.38 | wind | 9.0 | 720 | < th | dose independent | no | NA | NA |
| 464 | 446.78 | wind | 9.0 | 720 | < th | dose independent | rect. | 4 | 16 |
| 471 | 446.90 | wind | 9.0 | 270 | > th | dose independent | rect. | 17 | 6 |
| 583 | 448.66 | wind | 9.0 | 720 | > th | dose dependent | rect. | 13 | 4 |
| 703 | 450.24 | wind | 7.0 | 720 | > th | dose independent | rect. | 19 | 6 |
| 718 | 450.37 | wind | 7.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 731 | 450.47 | wind | 9.0 | 720 | > th | dose independent | rect. | 14 | 3 |
| 832 | 451.04 | wind | 9.0 | 720 | < th | dose independent | rect. | 8 | 15 |
| 833 | 451.05 | wind | 7.0 | 720 | > th | dose dependent | rect. | 19 | 6 |
| 846 | 451.12 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 5 | 4 |
| 854 | 451.16 | wind | 9.0 | 720 | < th | dose independent | rect. | 13 | 16 |
| 858 | 451.17 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 5 | 4 |
| 994 | 451.88 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 3 |