Os05g0544900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0544900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 147.42 | 0.57 | 6.85 | -1.98 | 1.79 | 1.8 | 0.398 | -1.38 | -0.888 | 1.09 | 24.1 | 20 | -- | -- |
| 148.23 | 0.567 | 6.82 | -1.81 | 1.78 | 1.71 | 0.635 | -- | -0.831 | 1.09 | 24.05 | 19 | -- | -- |
| 147.94 | 0.566 | 6.86 | -2.05 | 1.79 | 1.81 | -- | -1.84 | -0.904 | 1.04 | 24.1 | 19 | -- | -- |
| 149.76 | 0.57 | 6.83 | -1.81 | 1.76 | 1.64 | -- | -- | -0.836 | 1.04 | 24 | 19 | -- | -- |
| 212.31 | 0.679 | 6.8 | -1.81 | -- | 1.8 | -- | 0.767 | -0.856 | -- | 16.6 | 906 | -- | -- |
| 190.86 | 0.648 | 6.78 | -1.53 | 1.22 | -- | 0.12 | -- | -0.629 | 0.0357 | -- | -- | -- | -- |
| 190.92 | 0.647 | 6.78 | -1.54 | 1.22 | -- | -- | -- | -0.629 | 0.0263 | -- | -- | -- | -- |
| 210.43 | 0.676 | 6.84 | -2.09 | -- | 2.14 | -- | -- | -0.959 | -- | 14.91 | 897 | -- | -- |
| 231.41 | 0.712 | 6.77 | -- | 1.57 | 1.18 | -- | -- | -0.553 | 0.721 | 24.58 | 4 | -- | -- |
| 285.17 | 0.789 | 6.76 | -1.5 | -- | -- | -- | -- | -0.612 | -- | -- | -- | -- | -- |
| 253.16 | 0.744 | 6.75 | -- | 1.2 | -- | -- | -- | -0.458 | 24 | -- | -- | -- | -- |
| 312.86 | 0.824 | 6.76 | -- | -- | 1.33 | -- | -- | -0.616 | -- | 13.2 | 853 | -- | -- |
| 344.41 | 0.866 | 6.72 | -- | -- | -- | -- | -- | -0.446 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 137.15 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 15 |
| 5 | 137.76 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 27 | 140.99 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 43 | 141.59 | temperature | 10 | 720 | > th | dose dependent | sin | 4 | NA |
| 50 | 141.78 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 115 | 143.54 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 9 |
| 144 | 144.11 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 192 | 145.01 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 10 |
| 205 | 145.17 | temperature | 10 | 270 | > th | dose dependent | sin | 23 | NA |
| 208 | 145.27 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 219 | 145.41 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 13 |
| 264 | 145.82 | temperature | 25 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 428 | 147.69 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 448 | 147.89 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 21 |
| 453 | 147.95 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 506 | 148.43 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 567 | 148.85 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 577 | 148.94 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 630 | 149.30 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 649 | 149.39 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 669 | 149.50 | temperature | 25 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 746 | 149.95 | temperature | 25 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 840 | 150.40 | temperature | 25 | 270 | > th | dose independent | rect. | 2 | 17 |
| 942 | 151.02 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 968 | 151.20 | temperature | 10 | 10 | > th | dose dependent | sin | 21 | NA |
| 984 | 151.27 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 992 | 151.29 | temperature | 25 | 10 | > th | dose dependent | rect. | 13 | 23 |