Os05g0542700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0542700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106.18 | 0.484 | 9.47 | 0.898 | 1.34 | 0.786 | -0.354 | 0.223 | 0.613 | 0.59 | 70.51 | 1490 | -- | -- |
| 106.27 | 0.48 | 9.46 | 0.931 | 1.33 | 0.802 | -0.34 | -- | 0.623 | 0.579 | 70.88 | 1493 | -- | -- |
| 106.7 | 0.481 | 9.47 | 0.916 | 1.33 | 0.798 | -- | 0.172 | 0.619 | 0.566 | 70.87 | 1490 | -- | -- |
| 106.76 | 0.481 | 9.46 | 0.942 | 1.33 | 0.804 | -- | -- | 0.625 | 0.558 | 71 | 1490 | -- | -- |
| 176.05 | 0.621 | 9.46 | 0.901 | -- | 0.835 | -- | -0.303 | 0.55 | -- | 74 | 1635 | -- | -- |
| 128.86 | 0.532 | 9.49 | 0.758 | 1.36 | -- | -0.509 | -- | 0.513 | 0.608 | -- | -- | -- | -- |
| 129.95 | 0.534 | 9.49 | 0.778 | 1.37 | -- | -- | -- | 0.516 | 0.565 | -- | -- | -- | -- |
| 176.59 | 0.622 | 9.46 | 0.892 | -- | 0.833 | -- | -- | 0.547 | -- | 73.63 | 1634 | -- | -- |
| 130.09 | 0.531 | 9.46 | -- | 1.35 | 0.75 | -- | -- | 0.608 | 0.633 | 74.93 | 1439 | -- | -- |
| 246.8 | 0.734 | 9.46 | 0.825 | -- | -- | -- | -- | 0.539 | -- | -- | -- | -- | -- |
| 145.89 | 0.565 | 9.51 | -- | 1.38 | -- | -- | -- | 0.429 | 0.593 | -- | -- | -- | -- |
| 194.79 | 0.652 | 9.48 | -- | -- | 0.809 | -- | -- | 0.449 | -- | 75.96 | 1650 | -- | -- |
| 264.78 | 0.76 | 9.48 | -- | -- | -- | -- | -- | 0.448 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 100.33 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 2 | 100.64 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 23 | 102.20 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 8 |
| 24 | 102.21 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 31 | 102.32 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 36 | 102.44 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 41 | 102.51 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 42 | 102.51 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 3 |
| 55 | 102.80 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 63 | 102.93 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 71 | 103.10 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 118 | 103.75 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 19 | 18 |
| 127 | 103.83 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 128 | 103.83 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 129 | 103.83 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 139 | 103.96 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 143 | 103.98 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 11 |
| 145 | 103.99 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 4 | 11 |
| 146 | 104.00 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 4 | 9 |
| 150 | 104.01 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 7 |
| 153 | 104.01 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 159 | 104.03 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 22 | 15 |
| 172 | 104.05 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 4 |
| 196 | 104.18 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 203 | 104.23 | humidity | 80.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 211 | 104.27 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 231 | 104.44 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 243 | 104.51 | humidity | 80.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 251 | 104.54 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 10 |
| 257 | 104.57 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 6 |
| 264 | 104.59 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 280 | 104.69 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 281 | 104.69 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 287 | 104.73 | humidity | 70.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 356 | 104.93 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 363 | 104.96 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 376 | 104.99 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 436 | 105.21 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 453 | 105.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 455 | 105.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 549 | 105.65 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 553 | 105.65 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 8 | NA |
| 567 | 105.70 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 569 | 105.70 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 573 | 105.71 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 591 | 105.74 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 20 | 17 |
| 597 | 105.77 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 626 | 105.89 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 703 | 106.11 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 719 | 106.19 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 721 | 106.19 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 3 | 12 |
| 722 | 106.20 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 754 | 106.28 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 12 |
| 784 | 106.36 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 787 | 106.36 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 19 |
| 788 | 106.36 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 21 |
| 791 | 106.37 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 4 | 17 |
| 810 | 106.38 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 14 |
| 827 | 106.38 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 830 | 106.39 | humidity | 70.0 | 1440 | > th | dose independent | no | NA | NA |
| 831 | 106.39 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 8 | 13 |
| 837 | 106.39 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 843 | 106.39 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 22 | 22 |
| 891 | 106.41 | wind | 5.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 910 | 106.44 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 934 | 106.50 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 959 | 106.54 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 962 | 106.55 | humidity | 70.0 | 1440 | < th | dose independent | no | NA | NA |
| 963 | 106.55 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 6 | 14 |