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Os05g0540200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12 (0.014) R2 : 0.807
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.58 (0.0364) R2dC : 0.805 R2C : 0.794
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.144 (0.0295) R2dN8 : 0.0131 R2N8 : 0.00182
σ : 0.265
deviance : 32
__
_____
C
peak time of C : 19.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.53 0.251 12 0.247 1.42 -0.318 0.0207 -0.121 0.142 19.7 69.92 257 -- --
28.57 0.249 12 0.241 1.41 -0.323 0.0471 -- 0.141 19.7 69.81 262 -- --
28.53 0.249 12 0.246 1.42 -0.318 -- -0.127 0.142 19.7 69.46 255 -- --
28.57 0.249 12 0.24 1.41 -0.325 -- -- 0.14 19.7 69.52 260 -- --
72.49 0.397 11.9 0.188 -- -1.67 -- 0.393 0.028 -- 66.28 553 -- --
30.62 0.259 11.9 0.229 1.58 -- 0.0558 -- 0.17 19.2 -- -- -- --
30.63 0.259 11.9 0.228 1.58 -- -- -- 0.17 19.2 -- -- -- --
72.71 0.397 11.9 0.224 -- -1.65 -- -- 0.0303 -- 67 556 -- --
30.07 0.255 12 -- 1.42 -0.305 -- -- 0.12 19.7 69 260 -- --
163.39 0.597 11.9 0.2 -- -- -- -- 0.142 -- -- -- -- --
32 0.265 12 -- 1.58 -- -- -- 0.144 19.2 -- -- -- --
74 0.401 11.9 -- -- -1.66 -- -- 0.0112 -- 66.15 559 -- --
164.44 0.599 11.9 -- -- -- -- -- 0.12 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.55 temperature 20.0 10 > th dose dependent rect. 23 10
6 27.11 temperature 20.0 10 > th dose dependent rect. 5 4
14 27.36 temperature 15.0 10 > th dose dependent rect. 9 14
17 27.45 temperature 20.0 30 > th dose independent rect. 23 10
24 27.49 wind 5.0 720 < th dose independent rect. 9 1
26 27.51 temperature 15.0 10 > th dose dependent rect. 9 12
27 27.52 temperature 20.0 10 > th dose independent rect. 21 12
57 27.72 temperature 20.0 30 > th dose independent rect. 15 18
62 27.74 wind 7.0 720 < th dose dependent rect. 9 1
64 27.75 wind 7.0 30 < th dose independent rect. 9 21
82 27.84 temperature 25.0 90 > th dose independent rect. 5 3
89 27.86 temperature 20.0 270 > th dose dependent rect. 5 1
107 27.92 temperature 20.0 10 > th dose independent rect. 19 14
112 27.94 humidity 90.0 10 < th dose independent rect. 9 14
126 27.98 temperature 20.0 720 > th dose independent rect. 21 1
141 28.01 wind 7.0 270 < th dose independent rect. 6 22
166 28.07 temperature 20.0 270 > th dose independent rect. 11 21
167 28.07 temperature 15.0 720 > th dose dependent rect. 21 1
170 28.07 humidity 80.0 270 > th dose dependent rect. 3 18
182 28.09 humidity 90.0 10 < th dose independent rect. 9 21
190 28.10 temperature 10.0 10 > th dose dependent rect. 9 20
193 28.12 temperature 15.0 720 > th dose dependent rect. 9 1
203 28.15 humidity 80.0 720 < th dose independent rect. 9 1
207 28.15 humidity 90.0 10 < th dose dependent rect. 9 21
217 28.17 humidity 80.0 720 < th dose independent rect. 22 20
218 28.17 wind 5.0 720 < th dose dependent rect. 8 3
221 28.18 radiation 1.0 720 < th dose independent rect. 7 10
226 28.18 temperature 20.0 720 > th dose dependent rect. 21 3
246 28.21 humidity 90.0 720 < th dose independent rect. 7 12
252 28.21 temperature 10.0 720 > th dose dependent rect. 20 5
262 28.22 humidity 80.0 720 > th dose independent rect. 4 13
267 28.22 atmosphere 1015.0 10 < th dose dependent rect. 5 4
287 28.24 humidity 60.0 270 > th dose dependent rect. 10 22
290 28.25 humidity 80.0 270 > th dose independent rect. 3 16
318 28.28 radiation 1.0 720 < th dose independent rect. 6 19
330 28.29 radiation 1.0 720 < th dose dependent rect. 6 11
334 28.30 temperature 20.0 720 > th dose independent rect. 20 4
345 28.31 humidity 80.0 720 < th dose independent rect. 22 16
347 28.31 humidity 80.0 720 > th dose independent rect. 23 18
377 28.33 humidity 70.0 720 > th dose dependent rect. 4 13
378 28.33 humidity 60.0 270 > th dose dependent rect. 3 15
389 28.35 radiation 1.0 720 < th dose independent rect. 4 14
398 28.35 humidity 60.0 90 > th dose dependent rect. 5 13
404 28.35 humidity 90.0 270 < th dose dependent rect. 17 21
422 28.36 wind 9.0 90 < th dose dependent rect. 8 21
447 28.38 humidity 80.0 720 > th dose independent rect. 21 20
450 28.38 humidity 80.0 720 > th dose dependent rect. 8 9
459 28.39 humidity 80.0 720 > th dose independent sin 2 NA
469 28.39 radiation 1.0 720 < th dose independent rect. 20 22
489 28.40 precipitation 0.1 30 < th dose independent rect. 9 21
492 28.40 wind 9.0 720 < th dose dependent rect. 7 6
495 28.40 precipitation 0.1 30 < th dose dependent rect. 9 21
521 28.42 humidity 60.0 10 > th dose dependent rect. 5 15
522 28.42 radiation 1.0 10 > th dose dependent rect. 18 15
527 28.43 humidity 80.0 720 < th dose independent sin 3 NA
533 28.43 temperature 25.0 10 > th dose independent rect. 9 14
534 28.43 radiation 1.0 720 < th dose independent rect. 6 17
536 28.43 temperature 20.0 720 > th dose dependent rect. 23 1
538 28.43 radiation 1.0 10 > th dose dependent rect. 5 4
559 28.44 humidity 80.0 720 < th dose independent rect. 8 6
561 28.44 wind 7.0 30 < th dose independent rect. 9 10
579 28.44 humidity 70.0 270 > th dose dependent rect. 21 23
604 28.45 humidity 70.0 270 > th dose dependent rect. 23 23
615 28.46 temperature 30.0 720 < th dose dependent rect. 11 1
629 28.46 temperature 20.0 270 < th dose dependent rect. 5 22
633 28.47 radiation 1.0 720 > th dose independent rect. 7 11
643 28.47 humidity 80.0 270 < th dose independent rect. 16 22
644 28.47 precipitation 0.1 720 < th dose independent rect. 22 23
646 28.47 temperature 25.0 720 > th dose dependent rect. 9 3
651 28.47 humidity 60.0 10 > th dose dependent rect. 5 13
659 28.47 precipitation 0.1 720 < th dose dependent rect. 22 23
661 28.48 humidity 80.0 720 > th dose independent rect. 8 9
670 28.48 humidity 80.0 720 > th dose dependent sin 0 NA
671 28.48 temperature 25.0 720 < th dose dependent rect. 22 1
677 28.48 wind 9.0 10 < th dose dependent rect. 9 20
686 28.49 temperature 20.0 270 < th dose independent rect. 21 7
694 28.49 humidity 90.0 720 < th dose dependent rect. 9 1
710 28.50 wind 7.0 30 < th dose independent rect. 9 12
722 28.50 temperature 30.0 30 < th dose dependent rect. 11 9
733 28.50 humidity 70.0 270 > th dose dependent rect. 16 22
764 28.51 humidity 90.0 720 > th dose dependent rect. 7 14
770 28.52 temperature 20.0 270 < th dose independent rect. 22 5
797 28.53 temperature 20.0 720 < th dose independent rect. 21 3
813 28.53 temperature 15.0 720 > th dose dependent rect. 8 4
821 28.53 humidity 90.0 10 < th dose dependent rect. 9 14
822 28.53 radiation 1.0 720 < th dose dependent rect. 4 14
845 28.54 radiation 1.0 720 < th dose independent rect. 4 21
846 28.54 humidity 90.0 270 < th dose independent rect. 8 22
848 28.54 humidity 70.0 270 > th dose dependent no NA NA
867 28.54 humidity 70.0 270 > th dose dependent rect. 13 23
888 28.55 temperature 15.0 30 > th dose dependent rect. 9 6
900 28.55 humidity 60.0 90 > th dose dependent rect. 4 23
914 28.56 wind 5.0 90 < th dose dependent rect. 5 3
930 28.56 radiation 1.0 720 < th dose dependent rect. 6 19
934 28.56 radiation 1.0 720 < th dose dependent rect. 20 22
940 28.57 humidity 70.0 30 > th dose independent rect. 5 13
941 28.57 humidity 70.0 30 > th dose independent rect. 5 15
951 28.57 temperature 15.0 90 > th dose independent rect. 8 21
978 28.58 wind 3.0 10 < th dose independent rect. 5 4
979 28.58 radiation 1.0 30 > th dose independent rect. 5 4