Os05g0537300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Unconventional myosin heavy chain.
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Os05g0537300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Unconventional myosin heavy chain.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 130.42 | 0.537 | 8.55 | -2.8 | 1.46 | -1.53 | 1.12 | -2.18 | -0.101 | 5.21 | 24.24 | 279 | -- | -- |
| 134.84 | 0.541 | 8.59 | -3.13 | 1.6 | -1.25 | 0.674 | -- | -0.212 | 5.61 | 27.6 | 467 | -- | -- |
| 133.21 | 0.538 | 8.56 | -2.84 | 1.47 | -1.48 | -- | -1.76 | -0.102 | 5.21 | 24.2 | 280 | -- | -- |
| 135.98 | 0.543 | 8.6 | -3.13 | 1.6 | -1.28 | -- | -- | -0.218 | 5.6 | 27.48 | 461 | -- | -- |
| 216.41 | 0.685 | 8.62 | -3.04 | -- | -1.42 | -- | -0.769 | -0.146 | -- | 34.6 | 1283 | -- | -- |
| 159.04 | 0.591 | 8.54 | -2.79 | 1.32 | -- | 0.644 | -- | 0.0658 | 5.4 | -- | -- | -- | -- |
| 160.07 | 0.592 | 8.54 | -2.79 | 1.32 | -- | -- | -- | 0.0629 | 5.39 | -- | -- | -- | -- |
| 217.33 | 0.687 | 8.62 | -3.18 | -- | -1.42 | -- | -- | -0.161 | -- | 51.47 | 1279 | -- | -- |
| 254.15 | 0.742 | 8.35 | -- | 0.811 | 1.87 | -- | -- | 0.843 | 5.15 | 22.04 | 47520 | -- | -- |
| 251.53 | 0.741 | 8.56 | -2.75 | -- | -- | -- | -- | 0.0956 | -- | -- | -- | -- | -- |
| 365.46 | 0.894 | 8.47 | -- | 1.28 | -- | -- | -- | 0.374 | 5.48 | -- | -- | -- | -- |
| 330.88 | 0.847 | 8.39 | -- | -- | 1.79 | -- | -- | 0.848 | -- | 22.6 | 47520 | -- | -- |
| 450.55 | 0.991 | 8.49 | -- | -- | -- | -- | -- | 0.4 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.18 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 6 | 128.80 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 10 | 128.97 | temperature | 30 | 720 | < th | dose dependent | sin | 15 | NA |
| 12 | 129.00 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 13 |
| 18 | 129.30 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 19 | 129.36 | temperature | 20 | 720 | > th | dose dependent | rect. | 18 | 6 |
| 20 | 129.40 | temperature | 25 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 21 | 129.41 | temperature | 25 | 720 | < th | dose dependent | sin | 17 | NA |
| 25 | 129.49 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 16 |
| 26 | 129.53 | temperature | 20 | 720 | > th | dose dependent | rect. | 18 | 8 |
| 36 | 129.68 | temperature | 20 | 720 | > th | dose dependent | sin | 13 | NA |
| 53 | 129.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 76 | 130.33 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 162 | 131.24 | temperature | 10 | 720 | > th | dose dependent | sin | 14 | NA |
| 175 | 131.32 | temperature | 25 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 180 | 131.35 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 190 | 131.42 | temperature | 25 | 10 | < th | dose dependent | rect. | 18 | 23 |
| 198 | 131.45 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 22 |
| 201 | 131.46 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 214 | 131.50 | temperature | 25 | 10 | < th | dose dependent | rect. | 20 | 21 |
| 254 | 131.65 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 288 | 131.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 344 | 132.01 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 405 | 132.23 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 406 | 132.24 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 447 | 132.39 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 454 | 132.40 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 464 | 132.43 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 498 | 132.49 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 506 | 132.50 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 563 | 132.61 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 589 | 132.70 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 637 | 132.82 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 793 | 133.15 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 23 |
| 806 | 133.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 17 |
| 914 | 133.45 | temperature | 25 | 720 | > th | dose independent | rect. | 17 | 7 |