Os05g0535900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : IQ calmodulin-binding region domain containing protein.
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Os05g0535900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : IQ calmodulin-binding region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.08 | 0.525 | 8.79 | -1.84 | 2.14 | 1.66 | 1.11 | 0.171 | 0.0262 | 22.4 | 25.91 | 2609 | -- | -- |
| 125.05 | 0.521 | 8.79 | -1.86 | 2.16 | 1.65 | 1.15 | -- | 0.0297 | 22.5 | 26 | 2632 | -- | -- |
| 130.03 | 0.531 | 8.78 | -1.77 | 2.14 | 1.62 | -- | 0.613 | 0.0542 | 22.5 | 26.01 | 2601 | -- | -- |
| 130.14 | 0.531 | 8.8 | -1.93 | 2.13 | 1.69 | -- | -- | 0.0204 | 22.4 | 26 | 2604 | -- | -- |
| 314.46 | 0.826 | 8.81 | -1.98 | -- | 3.03 | -- | -0.615 | -0.0934 | -- | 24.4 | 912 | -- | -- |
| 233.06 | 0.716 | 8.78 | -1.33 | 2.36 | -- | 1.33 | -- | 0.108 | 22.7 | -- | -- | -- | -- |
| 240.44 | 0.726 | 8.78 | -1.38 | 2.35 | -- | -- | -- | 0.104 | 22.7 | -- | -- | -- | -- |
| 312 | 0.823 | 8.8 | -2.11 | -- | 3.06 | -- | -- | -0.21 | -- | 24.49 | 909 | -- | -- |
| 219.56 | 0.69 | 8.71 | -- | 2.19 | 1.31 | -- | -- | 0.381 | 22.5 | 27.9 | 2599 | -- | -- |
| 581.64 | 1.13 | 8.72 | -1.34 | -- | -- | -- | -- | 0.117 | -- | -- | -- | -- | -- |
| 290.86 | 0.798 | 8.75 | -- | 2.34 | -- | -- | -- | 0.258 | 22.6 | -- | -- | -- | -- |
| 423 | 0.958 | 8.73 | -- | -- | 2.6 | -- | -- | 0.0832 | -- | 24.6 | 891 | -- | -- |
| 628.85 | 1.17 | 8.69 | -- | -- | -- | -- | -- | 0.265 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 116.12 | temperature | 25 | 14400 | > th | dose dependent | rect. | 18 | 5 |
| 8 | 116.38 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 12 |
| 39 | 117.61 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 12 |
| 40 | 117.62 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 10 |
| 43 | 117.63 | temperature | 30 | 14400 | < th | dose independent | sin | 14 | NA |
| 45 | 117.64 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 8 |
| 48 | 117.65 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 57 | 117.75 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 73 | 117.77 | temperature | 30 | 14400 | > th | dose independent | sin | 14 | NA |
| 78 | 117.87 | temperature | 25 | 14400 | > th | dose dependent | sin | 12 | NA |
| 116 | 118.07 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 185 | 118.39 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 310 | 118.83 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 344 | 119.05 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 387 | 119.19 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 408 | 119.19 | temperature | 30 | 14400 | < th | dose independent | rect. | 23 | 20 |
| 417 | 119.19 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 23 |
| 426 | 119.19 | temperature | 30 | 14400 | < th | dose independent | rect. | 24 | 23 |
| 430 | 119.20 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 17 |
| 436 | 119.20 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 20 |
| 466 | 119.21 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 5 |
| 484 | 119.26 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 486 | 119.28 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 505 | 119.39 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 597 | 119.39 | temperature | 30 | 14400 | < th | dose independent | rect. | 17 | 23 |
| 607 | 119.46 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 617 | 119.46 | temperature | 30 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 618 | 119.48 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 8 |
| 621 | 119.49 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 679 | 119.58 | temperature | 30 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 715 | 119.75 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 8 |
| 724 | 119.77 | radiation | 20 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 828 | 120.16 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 829 | 120.19 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 831 | 120.21 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 871 | 120.48 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 873 | 120.50 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 9 |
| 882 | 120.62 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 7 |
| 903 | 120.70 | temperature | 25 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 930 | 120.79 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 931 | 120.79 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 943 | 120.90 | temperature | 25 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 982 | 121.06 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 2 |