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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0531600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2010 (--) R2 : 0.246
β1 : 23800 (--) R2dD : 1.2e+08 R2D : -1.34e+08
β2 : -- (--) R2dC : -- R2C : --
β3 : 923000 (--) R2dE : 6.58e+09 R2E : -6.59e+09
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 1.1e+07 (--) R2dD*E : 6.68e+09 R2D*E : -6.67e+09
γ1 : -0.0191 (--) R2dN8 : 0.000293 R2N8 : -14300000
σ : 0.46
deviance : 97.53
__
_____
C
peak time of C : --
E
wheather : wind
threshold : 0.9793
memory length : 91
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 16.5
open length of G : 0.75

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
96.81 0.458 2010 23800 0.105 923000 -0.0805 1.1e+07 -0.0169 12.8 0.9722 91 16.1 1.02
863149664171.37 43300 1810 23900 13.6 923000 -5720 -- 1610 8.41 1.294 98 16.4 0.00411
96.84 0.458 2010 23800 0.105 923000 -- 1.1e+07 -0.0171 12.9 0.9755 92 16.4 0.749
860296535473.16 43200 1810 23900 5580 923000 -- -- 1740 6.26 1.527 97 16.4 0.0547
97.53 0.46 2010 23800 -- 923000 -- 1.1e+07 -0.0191 -- 0.9793 91 16.5 0.75
128.01 0.53 3.25 0.0867 0.128 -- -0.078 -- -0.0337 14.5 -- -- -- --
128.03 0.53 3.25 0.0847 0.128 -- -- -- -0.0342 14.6 -- -- -- --
863577823700.81 43300 1800 23900 -- 923000 -- -- 2260 -- 1.893 215 16.4 0.0497
848377470865.52 42900 1800 -- 8740 923000 -- -- 1740 6.11 1.619 96 16.4 0.0658
128.99 0.531 3.25 0.0793 -- -- -- -- -0.0374 -- -- -- -- --
128.22 0.53 3.25 -- 0.127 -- -- -- -0.0436 14.6 -- -- -- --
852378178551.13 43000 1640 -- -- 923000 -- -- 2280 -- 1.329 97 16.4 0.0666
129.16 0.53 3.25 -- -- -- -- -- -0.0462 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 97.95 wind 1.0 90 < th dose independent rect. 16 1
2 97.95 wind 1.0 90 < th dose dependent rect. 16 1
13 112.98 precipitation 0.1 270 > th dose dependent rect. 14 3
15 113.10 precipitation 0.1 270 > th dose independent rect. 14 3
16 114.18 precipitation 0.1 270 > th dose independent rect. 14 1
17 114.18 precipitation 0.1 270 > th dose dependent rect. 14 1
24 114.47 humidity 90.0 270 > th dose independent rect. 14 1
27 114.48 wind 1.0 270 < th dose dependent rect. 14 1
28 114.48 humidity 90.0 270 > th dose dependent rect. 14 1
50 117.10 radiation 10.0 10 > th dose independent rect. 6 1
76 117.10 radiation 10.0 10 > th dose dependent rect. 6 1
112 118.24 wind 3.0 270 < th dose dependent rect. 14 4
113 118.40 precipitation 0.1 1440 < th dose independent rect. 14 4
114 118.40 precipitation 0.1 1440 < th dose dependent rect. 14 4
124 118.85 precipitation 0.1 14400 > th dose dependent rect. 20 7
125 118.86 precipitation 0.1 1440 > th dose independent rect. 14 4
126 118.89 humidity 60.0 14400 < th dose independent rect. 17 1
134 119.21 precipitation 0.1 4320 > th dose dependent rect. 14 4
136 119.23 precipitation 0.1 4320 > th dose dependent rect. 9 9
143 119.35 humidity 60.0 14400 < th dose independent rect. 17 15
146 119.39 humidity 60.0 14400 < th dose independent rect. 17 4
162 119.48 humidity 60.0 14400 > th dose independent rect. 17 2
166 119.50 atmosphere 1005.0 14400 < th dose dependent rect. 12 1
180 119.64 humidity 60.0 14400 > th dose independent rect. 17 15
181 119.64 atmosphere 1005.0 14400 < th dose dependent rect. 12 3
184 119.67 humidity 60.0 14400 > th dose independent rect. 17 7
185 119.67 precipitation 0.1 270 > th dose independent rect. 10 9
186 119.67 atmosphere 1005.0 14400 < th dose dependent rect. 14 1
188 119.68 humidity 60.0 14400 > th dose independent rect. 17 11
191 119.68 humidity 60.0 14400 < th dose dependent rect. 17 1
192 119.69 humidity 60.0 14400 > th dose independent rect. 17 4
204 119.70 temperature 10.0 720 > th dose dependent rect. 17 21
205 119.71 precipitation 0.1 4320 > th dose independent rect. 17 1
206 119.71 precipitation 0.1 43200 > th dose dependent rect. 17 1
224 119.76 radiation 1.0 14400 < th dose dependent rect. 23 1
232 119.80 precipitation 0.1 4320 < th dose independent rect. 17 1
233 119.80 precipitation 0.1 1440 < th dose independent rect. 8 10
235 119.80 precipitation 0.1 4320 < th dose dependent rect. 17 1
239 119.80 precipitation 0.1 1440 < th dose dependent rect. 8 10
246 119.82 atmosphere 1000.0 43200 > th dose independent rect. 22 1
247 119.82 atmosphere 1000.0 43200 < th dose independent rect. 22 1
253 119.82 wind 9.0 43200 > th dose dependent rect. 17 14
262 119.84 wind 9.0 43200 > th dose dependent rect. 18 12
273 119.88 humidity 50.0 14400 < th dose independent rect. 16 19
292 119.93 temperature 10.0 1440 > th dose dependent rect. 17 1
296 119.94 precipitation 0.1 1440 > th dose independent rect. 9 9
306 119.96 humidity 50.0 14400 < th dose independent rect. 15 3
330 119.97 wind 3.0 30 < th dose dependent rect. 6 1
339 119.99 humidity 50.0 14400 > th dose independent rect. 16 18
364 120.04 atmosphere 1005.0 14400 < th dose independent rect. 10 1
366 120.04 atmosphere 1005.0 14400 < th dose dependent sin 23 NA
402 120.09 temperature 10.0 720 > th dose dependent rect. 22 16
426 120.12 humidity 60.0 14400 < th dose dependent rect. 17 16
439 120.13 temperature 10.0 720 > th dose dependent rect. 2 22
519 120.20 temperature 30.0 1440 < th dose dependent rect. 17 1
532 120.21 atmosphere 995.0 14400 > th dose independent rect. 11 2
567 120.22 temperature 10.0 720 > th dose dependent rect. 12 22
613 120.25 atmosphere 1005.0 14400 < th dose dependent no NA NA
637 120.27 temperature 25.0 1440 < th dose independent rect. 6 1
640 120.27 wind 9.0 43200 > th dose dependent rect. 20 1
653 120.28 atmosphere 1000.0 14400 < th dose independent rect. 12 2
662 120.28 temperature 10.0 720 > th dose dependent rect. 2 17
665 120.28 temperature 10.0 720 > th dose dependent rect. 7 23
666 120.28 atmosphere 1005.0 14400 < th dose dependent rect. 14 23
715 120.31 temperature 10.0 720 > th dose dependent rect. 18 16
718 120.31 temperature 30.0 720 < th dose dependent rect. 24 21
721 120.32 wind 1.0 270 < th dose independent rect. 14 1
737 120.33 radiation 1.0 1440 > th dose dependent rect. 16 1
746 120.34 precipitation 0.1 14400 < th dose independent rect. 20 6
750 120.34 precipitation 0.1 14400 < th dose dependent rect. 20 6
757 120.35 precipitation 0.1 14400 > th dose independent rect. 20 6
772 120.36 atmosphere 1000.0 43200 < th dose independent rect. 20 17
785 120.37 wind 9.0 43200 > th dose independent rect. 18 13
801 120.38 atmosphere 1000.0 43200 > th dose independent rect. 21 18
806 120.38 wind 9.0 43200 > th dose dependent rect. 17 4
816 120.39 atmosphere 1000.0 43200 < th dose independent rect. 21 11
822 120.39 atmosphere 1000.0 43200 > th dose independent rect. 21 15
837 120.40 temperature 25.0 1440 > th dose independent rect. 6 1
866 120.41 atmosphere 1000.0 43200 > th dose independent rect. 14 1
872 120.41 atmosphere 1000.0 43200 > th dose independent rect. 21 11
883 120.41 atmosphere 1005.0 30 > th dose dependent rect. 6 1
905 120.42 wind 9.0 43200 > th dose independent rect. 17 15
910 120.42 radiation 40.0 1440 < th dose dependent rect. 16 1
919 120.42 temperature 30.0 720 < th dose dependent rect. 16 20
945 120.43 temperature 15.0 270 > th dose dependent rect. 23 23
946 120.44 atmosphere 1005.0 14400 > th dose independent rect. 4 1
948 120.44 precipitation 0.1 43200 < th dose independent rect. 17 1
965 120.44 precipitation 0.1 43200 < th dose dependent rect. 17 1
992 120.45 wind 1.0 43200 < th dose dependent rect. 19 2