Os05g0531400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0531400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.77 | 0.322 | 2.08 | -1.69 | 0.0607 | 89.1 | 0.0376 | 188 | 0.00107 | 9.6 | 15 | 90 | -- | -- |
| 50.99 | 0.335 | 2.86 | -0.12 | 0.0802 | 0.0276 | -0.112 | -- | -0.0142 | 10.2 | 15.2 | 19 | -- | -- |
| 47.77 | 0.322 | 2.07 | -1.69 | 0.0607 | 89.2 | -- | 188 | 0.00114 | 9.45 | 15 | 91 | -- | -- |
| 51.04 | 0.335 | 2.86 | -0.125 | 0.0804 | 0.0541 | -- | -- | -0.0147 | 10.2 | 14.94 | 20 | -- | -- |
| 47.99 | 0.323 | 2.07 | -1.7 | -- | 89.2 | -- | 188 | 0.00123 | -- | 15.01 | 92 | -- | -- |
| 50.99 | 0.335 | 2.86 | -0.119 | 0.0806 | -- | -0.115 | -- | -0.0139 | 10.2 | -- | -- | -- | -- |
| 51.05 | 0.335 | 2.86 | -0.123 | 0.0812 | -- | -- | -- | -0.0142 | 10.2 | -- | -- | -- | -- |
| 51.43 | 0.335 | 2.86 | -0.128 | -- | 0.0933 | -- | -- | -0.0153 | -- | 14.54 | 21 | -- | -- |
| 51.45 | 0.336 | 2.85 | -- | 0.082 | -0.0101 | -- | -- | -4e-04 | 10.3 | 14.94 | 20 | -- | -- |
| 51.45 | 0.335 | 2.86 | -0.124 | -- | -- | -- | -- | -0.0143 | -- | -- | -- | -- | -- |
| 51.45 | 0.336 | 2.85 | -- | 0.0818 | -- | -- | -- | -0.000458 | 10.3 | -- | -- | -- | -- |
| 49.66 | 0.329 | 2.85 | -- | -- | -0.667 | -- | -- | 0.00881 | -- | 15.71 | 221 | -- | -- |
| 51.85 | 0.336 | 2.85 | -- | -- | -- | -- | -- | -0.000535 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.56 | wind | 3.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 3 | 45.83 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 6 | 46.16 | wind | 5.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 9 | 46.22 | humidity | 60.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 35 | 46.22 | humidity | 60.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 61 | 46.27 | wind | 9.0 | 30 | < th | dose independent | rect. | 13 | 23 |
| 97 | 46.66 | humidity | 60.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 220 | 47.36 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 225 | 47.36 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 228 | 47.36 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 229 | 47.36 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 232 | 47.37 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 3 | 6 |
| 246 | 47.39 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 249 | 47.44 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 1 | 8 |
| 252 | 47.47 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 253 | 47.48 | radiation | 30.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 255 | 47.51 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 258 | 47.56 | radiation | 10.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 260 | 47.57 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 261 | 47.57 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 12 | 22 |
| 262 | 47.58 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 24 | 8 |
| 266 | 47.59 | wind | 9.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 267 | 47.59 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 269 | 47.59 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 271 | 47.59 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 273 | 47.59 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 1 |
| 274 | 47.59 | temperature | 10.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 276 | 47.59 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 289 | 47.61 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 293 | 47.66 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 12 | 1 |
| 299 | 47.66 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 12 | 5 |
| 310 | 47.67 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 311 | 47.67 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 313 | 47.67 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 14 | 2 |
| 334 | 47.68 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 354 | 47.68 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 5 | 12 |
| 360 | 47.69 | temperature | 15.0 | 720 | > th | dose independent | sin | 21 | NA |
| 361 | 47.69 | temperature | 15.0 | 1440 | < th | dose independent | sin | 22 | NA |
| 362 | 47.69 | temperature | 15.0 | 720 | < th | dose independent | sin | 1 | NA |
| 363 | 47.69 | temperature | 15.0 | 720 | < th | dose independent | rect. | 4 | 10 |
| 378 | 47.69 | temperature | 15.0 | 1440 | < th | dose dependent | sin | 22 | NA |
| 381 | 47.69 | temperature | 15.0 | 720 | < th | dose dependent | sin | 1 | NA |
| 382 | 47.69 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 395 | 47.69 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 4 | 10 |
| 427 | 47.69 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 3 | 16 |
| 439 | 47.70 | temperature | 15.0 | 720 | < th | dose independent | rect. | 4 | 1 |
| 440 | 47.70 | temperature | 15.0 | 720 | < th | dose independent | rect. | 1 | 2 |
| 461 | 47.70 | temperature | 20.0 | 90 | < th | dose independent | rect. | 9 | 6 |
| 467 | 47.70 | temperature | 20.0 | 10 | < th | dose independent | rect. | 9 | 7 |
| 499 | 47.70 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 24 | 15 |
| 505 | 47.70 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 506 | 47.70 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 510 | 47.70 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 543 | 47.70 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 8 | 8 |
| 594 | 47.71 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 598 | 47.71 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 601 | 47.71 | temperature | 20.0 | 10 | < th | dose independent | rect. | 9 | 3 |
| 611 | 47.71 | wind | 7.0 | 720 | > th | dose independent | rect. | 1 | 7 |
| 632 | 47.71 | wind | 7.0 | 720 | > th | dose dependent | rect. | 7 | 1 |
| 633 | 47.71 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 639 | 47.71 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 644 | 47.71 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 9 | 2 |
| 645 | 47.71 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 9 | 2 |
| 698 | 47.72 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 702 | 47.72 | wind | 7.0 | 720 | > th | dose independent | rect. | 4 | 4 |
| 704 | 47.72 | temperature | 20.0 | 90 | < th | dose independent | rect. | 11 | 4 |
| 755 | 47.72 | wind | 9.0 | 720 | > th | dose dependent | rect. | 22 | 12 |
| 756 | 47.72 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 3 | 12 |
| 765 | 47.73 | wind | 7.0 | 720 | > th | dose independent | rect. | 7 | 1 |
| 766 | 47.73 | temperature | 20.0 | 720 | < th | dose independent | rect. | 10 | 1 |
| 770 | 47.73 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 10 | 1 |
| 780 | 47.73 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 781 | 47.73 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 817 | 47.73 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 10 | 1 |
| 823 | 47.73 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 11 | 3 |
| 854 | 47.73 | wind | 9.0 | 720 | > th | dose dependent | rect. | 1 | 9 |
| 858 | 47.73 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 3 | 10 |
| 875 | 47.74 | temperature | 20.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 881 | 47.74 | humidity | 90.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 884 | 47.74 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 10 | 1 |
| 931 | 47.74 | wind | 9.0 | 720 | > th | dose dependent | rect. | 9 | 1 |
| 935 | 47.74 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 943 | 47.74 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 946 | 47.74 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 991 | 47.74 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 3 | 8 |