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Os05g0531000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF584 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0366) R2 : 0.86
β1 : -1.27 (0.134) R2dD : 0.0312 R2D : 0.0147
β2 : -- (--) R2dC : -- R2C : --
β3 : -4.36 (0.0842) R2dE : 0.82 R2E : 0.804
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.686 (0.0781) R2dN8 : 0.035 R2N8 : 0.00706
σ : 0.684
deviance : 215.86
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_____
C
peak time of C : --
E
wheather : radiation
threshold : 32.3
memory length : 25
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 9.06
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
188.94 0.646 11.1 -1.34 1.6 -2.85 1.06 -1.08 -0.636 9.32 10.7 10 9.06 --
188.88 0.64 11.1 -1.39 1.61 -2.84 2.2 -- -0.645 9.58 10.34 8 9.23 --
188.84 0.64 11.1 -1.29 1.5 -2.92 -- -1.93 -0.632 9.24 10.53 5 8.96 --
206.07 0.669 11.1 -1.3 1.47 -2.96 -- -- -0.616 9.31 10.16 5 9.08 --
196.59 0.653 11.2 -1.32 -- -4.44 -- -2.21 -0.712 -- 42.67 53 9.24 --
243.07 0.731 11 -1.36 4.52 -- 2.18 -- -0.596 9.82 -- -- -- --
261.36 0.757 11 -1.28 4.51 -- -- -- -0.592 9.82 -- -- -- --
215.86 0.684 11.2 -1.27 -- -4.36 -- -- -0.686 -- 32.3 25 9.06 --
250.4 0.737 11.1 -- 1.57 -2.9 -- -- -0.479 9.48 10 5 9.22 --
1476.88 1.8 11.1 -1.33 -- -- -- -- -0.589 -- -- -- -- --
304.54 0.816 11 -- 4.52 -- -- -- -0.449 9.84 -- -- -- --
262.74 0.755 11.1 -- -- -4.38 -- -- -0.576 -- 41.41 30 8.98 --
1523.28 1.82 11.1 -- -- -- -- -- -0.442 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 184.56 temperature 20.0 10 > th dose independent rect. 18 10
3 186.56 temperature 20.0 10 > th dose independent rect. 18 18
6 189.43 radiation 10.0 10 < th dose dependent sin 15 NA
11 190.97 precipitation 0.1 270 < th dose independent rect. 19 11
12 190.97 precipitation 0.1 270 < th dose dependent rect. 19 11
13 191.38 temperature 15.0 30 > th dose dependent rect. 18 10
17 191.58 atmosphere 1000.0 90 > th dose dependent rect. 17 4
18 191.82 radiation 1.0 30 > th dose independent rect. 12 6
24 192.21 humidity 90.0 10 < th dose independent rect. 12 6
47 193.76 temperature 10.0 270 > th dose dependent rect. 11 4
53 194.33 radiation 1.0 30 > th dose dependent sin 14 NA
54 194.51 temperature 20.0 270 > th dose independent rect. 15 11
56 194.66 temperature 15.0 10 > th dose dependent rect. 12 6
72 195.07 atmosphere 995.0 270 > th dose independent rect. 15 20
76 195.24 humidity 80.0 270 < th dose independent rect. 11 4
93 195.93 humidity 80.0 270 < th dose independent rect. 12 2
95 196.06 temperature 15.0 270 > th dose dependent rect. 12 2
103 196.58 radiation 1.0 30 > th dose independent sin 19 NA
104 196.60 radiation 1.0 30 < th dose independent sin 19 NA
105 196.61 radiation 10.0 270 > th dose independent rect. 11 4
110 196.77 wind 9.0 270 < th dose independent rect. 19 11
114 196.82 temperature 25.0 10 > th dose independent rect. 12 6
116 196.86 precipitation 0.1 720 < th dose independent rect. 19 20
117 196.86 precipitation 0.1 720 < th dose dependent rect. 19 20
120 196.91 atmosphere 1005.0 270 > th dose independent rect. 16 3
123 196.96 radiation 10.0 270 < th dose independent rect. 19 11
124 196.98 temperature 10.0 270 > th dose independent rect. 19 11
125 196.98 temperature 30.0 270 < th dose independent rect. 19 11
126 196.98 humidity 50.0 270 > th dose independent rect. 19 11
127 196.98 atmosphere 995.0 270 > th dose independent rect. 19 11
131 196.98 temperature 10.0 270 > th dose independent rect. 6 13
132 196.98 atmosphere 1015.0 270 < th dose independent rect. 6 13
133 196.99 radiation 10.0 30 > th dose independent rect. 12 19
138 197.12 radiation 40.0 270 < th dose dependent rect. 19 11
148 197.64 wind 9.0 270 < th dose independent rect. 6 13
150 197.65 atmosphere 995.0 270 > th dose independent rect. 6 13
154 197.73 radiation 1.0 30 < th dose independent rect. 7 14
155 197.76 atmosphere 1005.0 30 > th dose independent rect. 17 4
156 197.79 radiation 10.0 270 > th dose independent rect. 12 2
166 198.05 atmosphere 1010.0 270 < th dose independent rect. 11 4
172 198.27 precipitation 0.1 270 < th dose independent rect. 11 4
173 198.27 precipitation 0.1 270 < th dose dependent rect. 11 4
181 198.43 radiation 1.0 30 < th dose independent rect. 15 6
183 198.45 precipitation 0.1 90 < th dose independent rect. 21 10
185 198.45 precipitation 0.1 90 < th dose dependent rect. 21 10
199 198.74 radiation 1.0 30 < th dose dependent rect. 7 14
200 198.75 radiation 1.0 30 < th dose independent rect. 11 10
214 198.92 humidity 90.0 10 < th dose dependent rect. 12 6
216 198.96 temperature 10.0 270 > th dose independent rect. 11 4
218 198.96 temperature 10.0 270 > th dose independent rect. 15 20
222 199.04 radiation 1.0 30 < th dose dependent rect. 16 5
228 199.12 wind 9.0 270 < th dose independent rect. 15 20
229 199.14 wind 9.0 270 < th dose independent rect. 11 4
233 199.23 wind 5.0 90 < th dose independent rect. 17 4
258 199.50 radiation 30.0 720 < th dose independent rect. 15 4
259 199.52 humidity 90.0 270 < th dose dependent rect. 12 2
261 199.58 temperature 10.0 10 > th dose dependent rect. 18 18
264 199.61 radiation 1.0 30 < th dose dependent rect. 11 10
268 199.63 precipitation 0.1 720 < th dose independent rect. 11 20
271 199.63 precipitation 0.1 720 < th dose dependent rect. 11 20
280 199.73 wind 7.0 90 < th dose independent rect. 21 10
291 199.77 temperature 15.0 30 > th dose dependent rect. 18 3
292 199.78 temperature 25.0 270 > th dose independent rect. 12 2
321 200.21 atmosphere 995.0 90 > th dose independent rect. 17 19
325 200.23 temperature 20.0 30 > th dose independent rect. 18 3
331 200.30 atmosphere 995.0 270 > th dose independent rect. 11 4
366 200.61 radiation 1.0 270 > th dose dependent rect. 12 2
373 200.73 wind 1.0 270 > th dose independent rect. 11 4
374 200.73 wind 9.0 90 < th dose independent rect. 17 19
377 200.77 atmosphere 1015.0 90 < th dose dependent rect. 12 5
386 200.91 radiation 1.0 270 > th dose dependent rect. 11 4
389 200.94 precipitation 0.1 30 < th dose independent rect. 21 21
390 200.94 precipitation 0.1 30 < th dose dependent rect. 21 21
391 200.95 precipitation 0.1 720 < th dose independent rect. 3 4
392 200.95 precipitation 0.1 720 < th dose dependent rect. 3 4
406 201.03 temperature 10.0 90 > th dose independent rect. 17 19
419 201.22 radiation 30.0 90 < th dose independent rect. 21 10
420 201.23 temperature 10.0 90 > th dose independent rect. 21 10
421 201.23 temperature 30.0 90 < th dose independent rect. 21 10
422 201.23 humidity 50.0 90 > th dose independent rect. 21 10
424 201.23 atmosphere 995.0 90 > th dose independent rect. 21 10
430 201.25 precipitation 0.1 270 < th dose independent rect. 12 2
435 201.25 precipitation 0.1 270 < th dose dependent rect. 12 2
437 201.26 temperature 10.0 90 > th dose dependent rect. 4 13
475 201.56 wind 5.0 270 < th dose independent rect. 17 2
504 201.93 atmosphere 1015.0 10 < th dose dependent rect. 12 6
505 201.94 precipitation 0.1 720 < th dose independent rect. 19 4
508 201.94 precipitation 0.1 720 < th dose dependent rect. 19 4
510 201.96 wind 9.0 270 < th dose independent rect. 12 2
511 201.97 precipitation 0.1 10 < th dose independent rect. 12 6
512 201.97 precipitation 0.1 10 < th dose dependent rect. 12 6
517 202.01 temperature 10.0 270 > th dose independent rect. 12 2
519 202.01 atmosphere 995.0 270 > th dose independent rect. 12 2
521 202.01 temperature 10.0 270 > th dose independent rect. 14 22
536 202.12 atmosphere 1000.0 10 > th dose independent rect. 18 18
540 202.15 wind 9.0 10 < th dose independent rect. 12 6
541 202.16 humidity 50.0 90 > th dose independent rect. 17 4
556 202.30 wind 9.0 10 < th dose independent rect. 18 18
558 202.32 temperature 10.0 1440 > th dose independent rect. 13 5
562 202.32 temperature 10.0 1440 > th dose independent rect. 18 19
569 202.38 radiation 1.0 14400 < th dose dependent rect. 19 3
574 202.44 wind 9.0 270 < th dose independent rect. 14 22
582 202.54 atmosphere 1015.0 90 < th dose independent rect. 17 19
587 202.58 wind 7.0 720 < th dose independent rect. 19 4
589 202.59 temperature 10.0 10 > th dose independent rect. 12 6
591 202.59 atmosphere 1015.0 10 < th dose independent rect. 12 6
592 202.59 precipitation 0.1 270 < th dose independent rect. 6 13
593 202.59 temperature 10.0 10 > th dose independent rect. 18 18
595 202.59 precipitation 0.1 270 < th dose dependent rect. 6 13
609 202.78 radiation 1.0 90 > th dose dependent rect. 12 19
647 203.17 atmosphere 1015.0 10 < th dose independent rect. 18 18
649 203.21 wind 1.0 10 > th dose independent rect. 12 6
673 203.47 atmosphere 1015.0 270 < th dose dependent rect. 12 2
680 203.55 wind 1.0 270 > th dose independent rect. 12 2
723 203.72 temperature 10.0 30 > th dose independent rect. 18 3
726 203.72 atmosphere 1010.0 30 < th dose independent rect. 18 3
731 203.72 temperature 10.0 30 > th dose independent rect. 21 21
746 203.79 wind 1.0 30 > th dose independent rect. 18 3
756 203.91 precipitation 0.1 720 < th dose independent rect. 19 14
758 203.91 precipitation 0.1 720 < th dose dependent rect. 19 14
762 203.93 humidity 50.0 90 > th dose independent rect. 17 19
773 203.99 wind 9.0 90 < th dose dependent rect. 17 4
777 204.01 precipitation 0.1 10 < th dose independent rect. 18 3
779 204.01 precipitation 0.1 10 < th dose dependent rect. 18 3
780 204.02 wind 9.0 30 < th dose independent rect. 21 21
781 204.04 precipitation 0.1 270 < th dose independent rect. 2 13
785 204.04 precipitation 0.1 270 < th dose dependent rect. 2 13
808 204.23 humidity 50.0 270 > th dose independent rect. 11 4
816 204.30 atmosphere 1015.0 270 < th dose independent rect. 15 20
844 204.38 temperature 20.0 270 > th dose independent rect. 17 2
897 204.64 wind 7.0 720 < th dose independent rect. 3 4
914 204.75 wind 9.0 720 < th dose independent rect. 7 4
916 204.76 humidity 90.0 30 < th dose independent rect. 18 3
946 204.91 temperature 10.0 720 > th dose independent rect. 7 4
947 204.91 atmosphere 995.0 720 > th dose independent rect. 7 4
948 204.91 atmosphere 1015.0 720 < th dose independent rect. 7 4
949 204.91 temperature 10.0 720 > th dose independent rect. 11 20
959 205.00 wind 9.0 270 < th dose dependent rect. 17 2
981 205.15 precipitation 0.1 720 < th dose independent rect. 7 4
982 205.15 precipitation 0.1 720 < th dose dependent rect. 7 4
983 205.15 temperature 10.0 10 > th dose dependent rect. 4 14
992 205.19 radiation 20.0 720 < th dose independent rect. 3 4