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Os05g0530400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Heat stress transcription factor Spl7 (Heat shock transcription factor) (Heat shock factor RHSF10).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.84 (0.0387) R2 : 0.654
β1 : 2.32 (0.142) R2dD : 0.261 R2D : 0.277
β2 : 0.652 (0.0899) R2dC : 0.0401 R2C : 0.00165
β3 : 2.37 (0.22) R2dE : 0.185 R2E : 0.0237
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -7.44 (0.842) R2dD*E : 0.114 R2D*E : -0.143
γ1 : 1.51 (0.0788) R2dN8 : 0.423 R2N8 : 0.0521
σ : 0.652
deviance : 195.73
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_____
C
peak time of C : 16.7
E
wheather : wind
threshold : 0.4434
memory length : 4277
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 6.05
open length of G : 2.02

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
195.64 0.657 9.83 2.34 0.65 2.36 0.253 -7.39 1.52 16.6 0.4724 4277 6.05 2.05
234.94 0.714 9.79 2.62 0.651 1.44 -0.0726 -- 1.55 16.4 0.5 4275 5.92 2.15
195.73 0.652 9.84 2.32 0.652 2.37 -- -7.44 1.51 16.7 0.4434 4277 6.05 2.02
229.57 0.706 9.76 2.76 0.599 1.27 -- -- 1.51 16.2 0.5283 4274 5.93 1.92
216.46 0.685 9.83 2.35 -- 2.37 -- -7.27 1.51 -- 0.4151 4304 6.1 1.98
249.36 0.74 9.74 2.93 0.649 -- 0.177 -- 1.27 16.7 -- -- -- --
249.44 0.74 9.73 2.94 0.65 -- -- -- 1.27 16.7 -- -- -- --
244.86 0.729 9.71 2.66 -- 1.2 -- -- 1.3 -- 6.266 2467 5.87 4.87
361.89 0.886 9.7 -- 0.559 2.43 -- -- 1.54 16.2 0.3 4270 6.01 1.48
271.87 0.77 9.73 2.91 -- -- -- -- 1.25 -- -- -- -- --
476.53 1.02 9.81 -- 0.596 -- -- -- 0.944 16.8 -- -- -- --
300.25 0.807 9.7 -- -- 3.1 -- -- 1.27 -- 0.06371 37936 5.95 1.32
495.34 1.04 9.8 -- -- -- -- -- 0.931 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 203.74 wind 1.0 4320 < th dose dependent rect. 6 2
2 204.51 wind 3.0 14400 > th dose dependent rect. 17 2
3 204.88 radiation 40.0 1440 < th dose independent rect. 17 16
5 205.95 radiation 40.0 1440 < th dose independent rect. 3 6
9 206.45 radiation 40.0 1440 < th dose independent rect. 1 8
13 207.15 wind 1.0 43200 > th dose independent rect. 18 17
18 207.92 wind 1.0 43200 > th dose independent rect. 14 17
20 207.93 wind 1.0 43200 > th dose independent sin 12 NA
21 208.19 wind 1.0 43200 > th dose independent rect. 20 15
22 208.21 radiation 40.0 1440 < th dose independent rect. 7 2
23 208.22 wind 1.0 43200 > th dose independent rect. 16 15
28 208.32 wind 9.0 14400 < th dose dependent rect. 17 2
29 208.39 wind 7.0 43200 > th dose dependent rect. 18 1
33 208.48 wind 1.0 43200 < th dose dependent rect. 2 22
41 208.77 wind 1.0 43200 < th dose independent rect. 18 18
42 208.77 wind 1.0 43200 < th dose dependent rect. 12 20
45 209.03 wind 5.0 14400 > th dose independent rect. 17 2
50 209.21 wind 5.0 14400 < th dose independent rect. 17 2
55 209.32 wind 1.0 43200 < th dose independent rect. 19 16
57 209.39 radiation 40.0 1440 < th dose independent rect. 22 11
77 210.11 radiation 40.0 1440 > th dose independent rect. 8 1
94 210.18 wind 1.0 1440 < th dose independent rect. 6 5
97 210.21 wind 1.0 1440 < th dose dependent rect. 6 6
108 210.44 wind 1.0 43200 < th dose dependent rect. 15 20
113 210.61 wind 1.0 1440 < th dose dependent rect. 6 4
117 210.68 precipitation 0.1 43200 < th dose independent rect. 19 1
118 210.68 precipitation 0.1 43200 < th dose dependent rect. 19 1
121 210.73 precipitation 0.1 43200 > th dose independent rect. 19 1
122 210.74 atmosphere 1005.0 14400 > th dose independent rect. 14 4
125 210.80 atmosphere 1005.0 14400 > th dose independent rect. 15 1
126 210.80 precipitation 0.1 43200 > th dose dependent rect. 19 1
131 210.93 wind 1.0 43200 < th dose independent sin 13 NA
134 211.04 wind 1.0 1440 > th dose independent rect. 6 6
135 211.06 atmosphere 1005.0 14400 < th dose independent rect. 14 4
140 211.14 atmosphere 1005.0 14400 < th dose independent rect. 17 1
141 211.14 wind 1.0 43200 < th dose independent rect. 13 17
144 211.23 wind 1.0 43200 < th dose independent rect. 12 19
166 211.61 wind 1.0 43200 < th dose dependent rect. 18 20
185 211.81 atmosphere 1005.0 14400 > th dose independent rect. 17 1
199 211.94 wind 1.0 43200 < th dose dependent rect. 22 23
210 212.01 humidity 90.0 14400 < th dose independent rect. 1 4
216 212.05 wind 1.0 43200 < th dose dependent rect. 22 21
221 212.10 wind 1.0 43200 < th dose dependent rect. 22 16
244 212.36 wind 1.0 4320 < th dose independent rect. 6 2
257 212.48 humidity 70.0 43200 > th dose dependent rect. 5 2
258 212.49 wind 1.0 43200 < th dose dependent rect. 20 23
284 212.70 humidity 80.0 43200 > th dose independent rect. 23 19
285 212.70 atmosphere 1000.0 14400 > th dose dependent rect. 15 2
287 212.71 humidity 70.0 43200 > th dose dependent rect. 14 1
295 212.74 humidity 80.0 43200 > th dose independent rect. 15 1
303 212.76 wind 1.0 43200 < th dose dependent rect. 20 18
305 212.78 wind 1.0 43200 > th dose independent rect. 21 10
329 212.90 wind 5.0 1440 < th dose independent rect. 3 15
350 213.03 wind 5.0 1440 > th dose independent rect. 3 15
355 213.04 precipitation 0.1 43200 < th dose independent rect. 13 1
357 213.04 precipitation 0.1 43200 < th dose dependent rect. 13 1
360 213.06 precipitation 0.1 43200 > th dose independent rect. 13 1
380 213.17 humidity 80.0 43200 < th dose independent rect. 12 14
384 213.18 precipitation 0.1 43200 > th dose dependent rect. 13 1
392 213.21 humidity 60.0 43200 > th dose dependent rect. 2 14
393 213.21 wind 1.0 43200 < th dose dependent rect. 4 23
399 213.23 humidity 60.0 43200 > th dose dependent rect. 1 16
405 213.26 humidity 80.0 43200 < th dose independent rect. 10 18
426 213.34 humidity 80.0 43200 > th dose independent rect. 10 18
429 213.36 humidity 80.0 43200 > th dose independent rect. 12 14
440 213.40 wind 5.0 14400 < th dose independent rect. 15 7
442 213.40 wind 1.0 43200 < th dose dependent sin 6 NA
443 213.40 wind 1.0 43200 < th dose dependent no NA NA
462 213.46 wind 5.0 1440 < th dose independent rect. 6 12
464 213.46 wind 9.0 14400 > th dose dependent rect. 15 7
466 213.47 humidity 80.0 43200 < th dose independent rect. 23 19
498 213.54 humidity 90.0 43200 < th dose dependent rect. 13 1
507 213.57 humidity 60.0 43200 > th dose dependent sin 3 NA
516 213.60 wind 5.0 1440 > th dose independent rect. 6 12
554 213.70 humidity 90.0 43200 < th dose independent rect. 5 1
568 213.73 atmosphere 1005.0 14400 > th dose dependent rect. 24 1
580 213.77 humidity 80.0 43200 < th dose independent sin 17 NA
624 213.89 wind 5.0 14400 > th dose independent rect. 15 8
653 213.94 wind 9.0 14400 < th dose dependent rect. 15 6
725 214.09 wind 1.0 43200 > th dose independent rect. 23 6
737 214.12 humidity 80.0 43200 > th dose independent sin 17 NA
754 214.15 humidity 80.0 43200 > th dose independent rect. 5 22
758 214.15 atmosphere 1000.0 14400 > th dose dependent rect. 13 16
816 214.23 humidity 80.0 43200 > th dose independent rect. 24 23
854 214.27 atmosphere 1000.0 14400 > th dose dependent rect. 3 1
884 214.31 atmosphere 1000.0 14400 > th dose dependent sin 18 NA
891 214.33 humidity 80.0 43200 < th dose independent rect. 15 1
908 214.34 humidity 80.0 43200 < th dose independent rect. 5 22
943 214.37 humidity 80.0 43200 > th dose independent no NA NA
983 214.40 humidity 80.0 43200 < th dose independent rect. 24 23