FiT-DB / Search/ Help/ Sample detail

Os05g0529700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Heat shock protein DnaJ family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.97 (0.0283) R2 : 0.897
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.94 (0.0877) R2dC : 0.678 R2C : 0.857
β3 : -1.07 (0.099) R2dE : 0.0399 R2E : 0.214
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.143 (0.0604) R2dN8 : 0.00169 R2N8 : -0.00433
σ : 0.53
deviance : 129.49
__
_____
C
peak time of C : 7.92
E
wheather : temperature
threshold : 28.22
memory length : 519
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
110.02 0.493 9.99 -0.132 4.04 -0.815 2.59 -0.775 0.111 7.87 27.5 508 -- --
109.02 0.486 9.97 -0.021 4.01 -0.959 2.63 -- 0.136 7.89 28.24 522 -- --
127.01 0.525 10 -0.0889 3.97 -0.948 -- -1.05 0.0917 7.85 28.26 532 -- --
129.32 0.53 9.97 0.0898 3.92 -1.08 -- -- 0.158 7.91 28.3 522 -- --
692.15 1.23 9.9 0.668 -- -3.23 -- -0.531 0.958 -- 26.3 560 -- --
130 0.535 9.99 -0.21 4.51 -- 3.09 -- 0.00947 7.68 -- -- -- --
157 0.587 9.99 -0.133 4.52 -- -- -- 0.00496 7.67 -- -- -- --
691.38 1.22 9.9 0.893 -- -3.27 -- -- 0.977 -- 26.3 560 -- --
129.49 0.53 9.97 -- 3.94 -1.07 -- -- 0.143 7.92 28.22 519 -- --
1254.43 1.65 10.1 -0.0727 -- -- -- -- 0.0716 -- -- -- -- --
157.47 0.587 9.99 -- 4.51 -- -- -- 0.0198 7.67 -- -- -- --
711.44 1.24 9.92 -- -- -3.14 -- -- 0.854 -- 26.3 550 -- --
1254.56 1.65 10.1 -- -- -- -- -- 0.0797 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 99.27 temperature 25.0 270 > th dose independent rect. 15 4
2 99.89 temperature 10.0 720 > th dose dependent rect. 7 3
4 101.00 temperature 15.0 90 > th dose independent rect. 19 23
7 101.57 temperature 20.0 720 > th dose dependent rect. 8 1
11 102.24 temperature 25.0 270 > th dose independent rect. 16 1
19 103.51 wind 5.0 30 < th dose independent rect. 16 4
20 103.82 temperature 20.0 270 > th dose dependent rect. 15 4
22 103.91 temperature 15.0 270 > th dose independent rect. 19 10
24 104.19 temperature 15.0 270 > th dose independent rect. 17 23
26 104.22 radiation 1.0 270 > th dose dependent rect. 15 18
29 104.41 temperature 20.0 90 > th dose independent rect. 18 1
30 104.41 temperature 10.0 90 > th dose dependent rect. 7 13
32 104.45 wind 5.0 90 < th dose independent rect. 18 1
33 104.45 temperature 25.0 720 > th dose independent rect. 7 11
34 104.45 temperature 25.0 720 > th dose independent rect. 6 13
35 104.48 wind 5.0 720 < th dose independent rect. 7 2
36 104.49 temperature 30.0 720 < th dose dependent rect. 10 3
39 104.57 temperature 10.0 270 > th dose dependent rect. 14 20
47 104.92 temperature 25.0 270 > th dose dependent rect. 15 19
48 104.97 temperature 20.0 270 > th dose dependent rect. 16 1
54 105.14 temperature 25.0 30 > th dose independent rect. 16 4
57 105.23 temperature 10.0 270 > th dose dependent rect. 5 14
63 105.37 temperature 10.0 720 > th dose dependent rect. 7 12
67 105.52 temperature 25.0 720 > th dose independent rect. 8 2
70 105.55 wind 9.0 90 < th dose dependent rect. 18 1
75 105.63 temperature 10.0 90 > th dose dependent rect. 18 1
76 105.67 temperature 10.0 720 > th dose dependent rect. 7 10
84 105.83 temperature 15.0 270 > th dose dependent rect. 14 9
86 105.88 radiation 10.0 270 > th dose dependent rect. 16 15
94 105.95 temperature 15.0 1440 > th dose independent rect. 17 4
97 105.99 temperature 10.0 30 > th dose dependent rect. 16 4
103 106.04 radiation 10.0 90 < th dose independent rect. 18 1
105 106.06 temperature 15.0 10 > th dose independent rect. 20 11
108 106.08 radiation 20.0 90 < th dose dependent rect. 18 1
113 106.10 temperature 10.0 90 > th dose independent rect. 18 1
115 106.10 humidity 50.0 90 > th dose independent rect. 18 1
116 106.10 atmosphere 1010.0 90 < th dose independent rect. 18 1
128 106.21 atmosphere 995.0 90 > th dose independent rect. 18 1
130 106.28 radiation 1.0 270 > th dose independent rect. 15 18
133 106.31 wind 1.0 90 > th dose independent rect. 18 1
145 106.48 radiation 20.0 270 > th dose independent rect. 15 18
157 106.65 precipitation 0.1 90 < th dose independent rect. 18 1
158 106.65 radiation 30.0 270 < th dose dependent sin 12 NA
159 106.65 precipitation 0.1 90 < th dose dependent rect. 18 1
161 106.67 temperature 30.0 270 < th dose independent rect. 10 4
162 106.69 temperature 30.0 30 < th dose independent rect. 20 20
173 106.84 wind 9.0 30 < th dose dependent rect. 16 4
176 106.86 temperature 15.0 10 > th dose independent rect. 20 20
186 106.93 temperature 25.0 720 > th dose independent sin 2 NA
187 106.93 temperature 25.0 720 < th dose independent rect. 3 15
202 107.11 atmosphere 1000.0 270 > th dose independent rect. 10 4
212 107.19 wind 7.0 270 < th dose independent rect. 14 20
218 107.22 atmosphere 1015.0 90 < th dose dependent rect. 18 1
227 107.29 wind 9.0 270 < th dose independent rect. 5 14
239 107.40 radiation 30.0 43200 < th dose independent rect. 17 4
264 107.62 atmosphere 995.0 270 > th dose dependent rect. 10 4
269 107.67 wind 9.0 90 < th dose independent rect. 7 13
270 107.67 radiation 10.0 270 > th dose dependent rect. 16 1
272 107.68 humidity 70.0 270 > th dose independent rect. 19 10
278 107.76 humidity 90.0 90 < th dose independent rect. 18 1
282 107.80 radiation 1.0 270 > th dose dependent sin 12 NA
284 107.82 radiation 1.0 270 < th dose dependent rect. 17 12
294 107.88 temperature 25.0 720 < th dose independent sin 1 NA
297 107.90 wind 7.0 270 < th dose independent rect. 15 18
317 107.93 radiation 1.0 270 > th dose independent rect. 14 20
318 107.93 atmosphere 995.0 90 > th dose dependent rect. 18 1
331 108.03 temperature 15.0 10 > th dose independent rect. 20 22
335 108.05 atmosphere 1000.0 30 > th dose independent rect. 10 6
350 108.11 temperature 15.0 270 > th dose independent rect. 10 13
355 108.12 radiation 10.0 270 > th dose independent rect. 16 15
357 108.14 radiation 1.0 270 > th dose independent rect. 16 1
359 108.14 wind 9.0 90 < th dose independent rect. 19 23
366 108.18 temperature 25.0 720 > th dose independent rect. 7 6
375 108.29 atmosphere 995.0 30 > th dose independent rect. 16 4
386 108.36 precipitation 0.1 10 < th dose independent rect. 16 4
387 108.36 precipitation 0.1 10 < th dose dependent rect. 16 4
395 108.40 temperature 30.0 90 < th dose independent rect. 20 11
396 108.40 humidity 50.0 90 > th dose independent rect. 20 11
398 108.40 atmosphere 995.0 90 > th dose independent rect. 20 11
399 108.40 radiation 30.0 90 < th dose independent rect. 20 11
401 108.40 temperature 10.0 90 > th dose independent rect. 7 13
402 108.40 atmosphere 1015.0 90 < th dose independent rect. 7 13
408 108.42 humidity 90.0 270 < th dose independent rect. 16 1
413 108.43 radiation 40.0 90 < th dose dependent rect. 20 11
414 108.44 temperature 15.0 720 > th dose independent rect. 19 3
424 108.48 wind 9.0 90 < th dose independent rect. 20 11
425 108.48 wind 1.0 90 > th dose independent rect. 7 13
449 108.61 wind 1.0 90 > th dose dependent rect. 18 1
455 108.65 wind 9.0 10 < th dose independent rect. 7 13
458 108.66 wind 1.0 10 > th dose independent rect. 16 4
463 108.68 radiation 1.0 270 > th dose independent sin 13 NA
475 108.74 radiation 40.0 10 < th dose dependent rect. 20 11
477 108.75 radiation 30.0 10 < th dose independent rect. 16 4
479 108.75 atmosphere 995.0 30 > th dose independent rect. 20 20
481 108.76 temperature 10.0 30 > th dose independent rect. 16 4
483 108.76 atmosphere 1010.0 30 < th dose independent rect. 16 4
489 108.77 radiation 10.0 10 < th dose independent rect. 20 11
491 108.77 temperature 15.0 720 > th dose independent rect. 10 21
497 108.78 humidity 90.0 270 < th dose independent rect. 15 4
506 108.81 precipitation 0.1 90 < th dose independent rect. 19 23
508 108.81 precipitation 0.1 90 < th dose dependent rect. 19 23
524 108.85 temperature 10.0 270 > th dose independent rect. 5 14
525 108.85 atmosphere 1015.0 270 < th dose independent rect. 5 14
526 108.85 radiation 40.0 10 < th dose dependent rect. 16 4
527 108.86 radiation 1.0 270 < th dose independent rect. 19 10
540 108.88 wind 7.0 30 < th dose independent rect. 16 18
544 108.90 radiation 1.0 270 > th dose independent rect. 15 4
606 109.17 wind 9.0 10 < th dose independent rect. 20 20
610 109.20 temperature 15.0 1440 > th dose independent rect. 11 6
612 109.21 temperature 10.0 30 > th dose dependent rect. 16 18
617 109.26 precipitation 0.1 10 < th dose independent rect. 7 13
618 109.26 precipitation 0.1 10 < th dose dependent rect. 7 13
628 109.30 radiation 1.0 270 < th dose dependent sin 13 NA
634 109.32 temperature 30.0 270 < th dose dependent rect. 9 17
639 109.35 temperature 30.0 10 < th dose independent rect. 20 11
640 109.35 humidity 50.0 10 > th dose independent rect. 20 11
643 109.35 atmosphere 995.0 10 > th dose independent rect. 20 11
647 109.35 temperature 10.0 10 > th dose independent rect. 7 13
649 109.35 atmosphere 1015.0 10 < th dose independent rect. 7 13
652 109.36 radiation 1.0 270 < th dose independent sin 13 NA
653 109.36 radiation 40.0 270 < th dose independent rect. 10 4
665 109.39 temperature 20.0 270 > th dose independent rect. 10 4
681 109.40 wind 9.0 10 < th dose independent rect. 20 11
699 109.44 temperature 30.0 270 < th dose dependent rect. 10 13
705 109.49 humidity 90.0 270 < th dose independent rect. 10 4
739 109.61 wind 9.0 720 < th dose dependent rect. 7 2
781 109.74 radiation 40.0 720 > th dose dependent rect. 9 1
786 109.76 wind 1.0 270 > th dose independent rect. 16 1
788 109.76 radiation 40.0 10 < th dose independent rect. 20 20
790 109.77 precipitation 0.1 10 < th dose independent rect. 18 2
791 109.77 precipitation 0.1 270 < th dose independent rect. 14 20
792 109.77 precipitation 0.1 10 < th dose dependent rect. 18 2
795 109.77 precipitation 0.1 270 < th dose dependent rect. 14 20
797 109.78 wind 9.0 720 < th dose independent rect. 22 21
804 109.80 temperature 10.0 1440 > th dose independent rect. 21 11
807 109.80 temperature 30.0 1440 < th dose independent rect. 21 11
811 109.80 humidity 50.0 1440 > th dose independent rect. 21 11
816 109.80 atmosphere 995.0 1440 > th dose independent rect. 21 11
817 109.80 temperature 10.0 1440 > th dose independent rect. 8 13
841 109.88 radiation 30.0 270 < th dose independent rect. 16 1
850 109.89 precipitation 0.1 270 < th dose independent rect. 5 14
853 109.89 precipitation 0.1 270 < th dose dependent rect. 5 14
855 109.90 temperature 10.0 270 > th dose independent rect. 16 1
857 109.90 atmosphere 1010.0 270 < th dose independent rect. 16 1
913 110.06 atmosphere 1000.0 270 > th dose independent rect. 11 2
925 110.09 radiation 30.0 1440 < th dose independent rect. 17 4
931 110.09 temperature 10.0 1440 > th dose independent rect. 21 20
941 110.11 temperature 20.0 30 > th dose independent rect. 10 6
954 110.16 radiation 10.0 10 < th dose dependent rect. 18 2
957 110.18 radiation 1.0 270 > th dose independent rect. 10 4
961 110.19 atmosphere 1015.0 30 < th dose independent rect. 20 20
966 110.21 temperature 30.0 270 < th dose independent rect. 9 20
970 110.24 precipitation 0.1 90 < th dose independent rect. 20 11
973 110.24 precipitation 0.1 90 < th dose dependent rect. 20 11
979 110.29 temperature 25.0 720 > th dose dependent rect. 2 8
984 110.30 radiation 20.0 720 < th dose dependent rect. 19 12
990 110.33 precipitation 0.1 270 < th dose independent rect. 15 18
991 110.33 precipitation 0.1 270 < th dose dependent rect. 15 18
1000 110.36 temperature 25.0 720 > th dose dependent sin 4 NA