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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0527600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.1 (0.0424) R2 : 0.0011
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0633 (0.0892) R2dN8 : 0.00142 R2N8 : 0.0011
σ : 0.798
deviance : 292.4
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
272.35 0.775 1.47 -3.5 0.276 -128 -0.00169 -273 0.0707 8.95 15 1438 -- --
282.45 0.789 3.09 -0.102 0.31 1.49 -0.28 -- 0.0579 9.24 14.78 461 -- --
272.35 0.769 1.47 -3.5 0.276 -128 -- -273 0.0707 8.95 15 1438 -- --
273.17 0.775 3.08 -0.0072 0.286 1.7 -- -- 0.0844 8.98 15.47 119 -- --
276.7 0.775 1.47 -3.52 -- -128 -- -273 0.0709 -- 15 1449 -- --
286.66 0.794 3.09 -0.165 0.292 -- -0.13 -- 0.0427 9.01 -- -- -- --
286.72 0.793 3.09 -0.169 0.292 -- -- -- 0.0427 9.07 -- -- -- --
277.88 0.78 3.09 -0.00626 -- 1.71 -- -- 0.0866 -- 15.7 86 -- --
273.18 0.774 3.08 -- 0.286 1.7 -- -- 0.0853 8.98 15.49 33 -- --
291.64 0.798 3.1 -0.17 -- -- -- -- 0.0444 -- -- -- -- --
287.48 0.793 3.09 -- 0.292 -- -- -- 0.0616 9.11 -- -- -- --
277.88 0.779 3.09 -- -- 1.72 -- -- 0.0873 -- 15.7 86 -- --
292.4 0.798 3.1 -- -- -- -- -- 0.0633 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 261.27 atmosphere 1000.0 10 < th dose independent rect. 1 8
8 262.53 atmosphere 1000.0 10 < th dose dependent rect. 1 8
21 265.83 atmosphere 1000.0 30 < th dose independent rect. 5 3
23 265.84 atmosphere 1000.0 270 < th dose independent rect. 4 1
28 265.84 atmosphere 1000.0 270 < th dose dependent rect. 4 1
29 265.85 atmosphere 1000.0 10 < th dose dependent rect. 5 4
50 269.26 temperature 15.0 90 > th dose independent rect. 4 23
52 269.72 humidity 90.0 1440 > th dose dependent rect. 7 3
53 269.75 humidity 90.0 1440 > th dose dependent rect. 7 5
58 269.97 atmosphere 1015.0 1440 < th dose independent rect. 2 1
59 270.24 atmosphere 1000.0 270 < th dose dependent rect. 24 5
60 270.25 temperature 15.0 1440 > th dose independent rect. 6 21
65 270.62 atmosphere 1000.0 270 < th dose independent rect. 1 4
74 270.98 temperature 15.0 1440 > th dose independent rect. 6 23
76 271.01 humidity 90.0 1440 < th dose independent rect. 9 1
79 271.20 atmosphere 1015.0 1440 < th dose independent rect. 3 3
81 271.29 humidity 90.0 1440 > th dose independent rect. 9 1
83 271.34 wind 1.0 1440 < th dose independent rect. 18 5
87 271.40 precipitation 0.1 1440 > th dose independent rect. 2 1
89 271.40 precipitation 0.1 1440 > th dose dependent rect. 2 1
90 271.44 temperature 15.0 1440 > th dose independent rect. 9 18
91 271.46 temperature 15.0 1440 > th dose independent rect. 1 2
94 271.48 wind 1.0 1440 < th dose independent rect. 15 12
95 271.50 temperature 15.0 1440 > th dose independent rect. 17 22
96 271.50 humidity 90.0 1440 > th dose dependent rect. 9 1
98 271.55 radiation 1.0 1440 < th dose dependent rect. 7 2
99 271.57 temperature 15.0 1440 > th dose independent rect. 17 10
100 271.57 temperature 15.0 1440 > th dose independent rect. 4 23
101 271.58 wind 1.0 1440 < th dose independent rect. 13 14
102 271.63 temperature 15.0 1440 > th dose independent rect. 6 9
104 271.65 wind 1.0 1440 > th dose independent rect. 18 5
105 271.66 wind 1.0 1440 > th dose independent rect. 15 12
107 271.70 wind 1.0 720 < th dose dependent rect. 15 12
109 271.72 temperature 15.0 1440 > th dose independent rect. 2 13
111 271.76 atmosphere 1015.0 1440 < th dose independent rect. 3 6
115 271.78 wind 1.0 720 < th dose dependent rect. 17 10
117 271.79 wind 1.0 1440 > th dose independent rect. 13 14
119 271.80 wind 1.0 1440 > th dose independent rect. 1 2
120 271.80 wind 1.0 720 < th dose independent rect. 17 10
121 271.80 wind 1.0 720 < th dose dependent rect. 20 7
129 271.83 wind 1.0 1440 < th dose dependent rect. 2 1
132 271.85 wind 1.0 720 < th dose independent rect. 20 7
139 271.92 temperature 15.0 1440 > th dose independent rect. 12 23
142 272.00 temperature 15.0 1440 > th dose independent rect. 24 15
148 272.05 wind 1.0 1440 < th dose independent rect. 1 2
151 272.07 temperature 15.0 1440 > th dose independent rect. 21 18
153 272.13 precipitation 0.1 1440 < th dose independent rect. 8 2
154 272.13 precipitation 0.1 1440 < th dose dependent rect. 8 2
155 272.15 radiation 1.0 1440 < th dose independent rect. 8 1
162 272.20 temperature 15.0 1440 > th dose independent rect. 19 20
163 272.21 temperature 15.0 720 > th dose independent rect. 9 7
166 272.23 radiation 1.0 1440 > th dose independent rect. 7 3
167 272.23 temperature 20.0 1440 < th dose dependent rect. 9 6
168 272.24 temperature 20.0 10 < th dose dependent rect. 11 18
171 272.26 precipitation 0.1 1440 < th dose independent rect. 6 1
173 272.26 temperature 15.0 1440 > th dose independent rect. 24 23
174 272.26 precipitation 0.1 1440 < th dose dependent rect. 6 1
175 272.27 radiation 1.0 1440 < th dose independent rect. 7 3
186 272.33 temperature 15.0 1440 > th dose independent rect. 11 1
188 272.33 temperature 15.0 1440 < th dose independent rect. 3 22
190 272.34 temperature 15.0 1440 < th dose independent rect. 4 20
193 272.34 temperature 15.0 1440 < th dose dependent rect. 1 21
194 272.35 temperature 15.0 1440 < th dose independent no NA NA
195 272.35 temperature 15.0 1440 < th dose independent rect. 20 10
196 272.35 temperature 15.0 1440 < th dose independent rect. 19 12
199 272.35 temperature 15.0 1440 < th dose independent rect. 18 16
203 272.35 temperature 15.0 1440 < th dose independent rect. 14 21
204 272.35 temperature 15.0 1440 < th dose independent rect. 17 21
206 272.35 temperature 15.0 1440 < th dose independent rect. 9 22
211 272.35 temperature 15.0 1440 > th dose independent rect. 9 23
220 272.35 temperature 15.0 1440 < th dose dependent rect. 23 6
223 272.36 temperature 15.0 1440 > th dose independent no NA NA
224 272.36 temperature 15.0 1440 < th dose independent sin 11 NA
245 272.36 temperature 15.0 1440 < th dose independent rect. 1 23
258 272.36 temperature 15.0 1440 < th dose dependent sin 7 NA
262 272.37 temperature 15.0 1440 < th dose independent rect. 21 8
282 272.38 temperature 15.0 720 < th dose independent rect. 13 16
301 272.38 temperature 15.0 1440 < th dose dependent rect. 22 13
306 272.39 temperature 15.0 1440 > th dose independent rect. 17 12
317 272.40 temperature 15.0 4320 > th dose independent rect. 6 7
329 272.40 temperature 15.0 1440 > th dose independent rect. 2 23
335 272.41 temperature 15.0 1440 > th dose independent rect. 2 16
339 272.41 temperature 15.0 1440 > th dose independent rect. 21 23
342 272.42 temperature 15.0 720 < th dose independent sin 14 NA
348 272.42 temperature 15.0 1440 > th dose independent rect. 24 20
359 272.43 temperature 15.0 1440 > th dose independent rect. 24 18
379 272.44 temperature 15.0 1440 > th dose independent rect. 19 23
381 272.44 wind 1.0 1440 < th dose dependent rect. 18 5
382 272.44 wind 9.0 1440 > th dose dependent rect. 21 13
394 272.45 temperature 15.0 720 < th dose dependent no NA NA
395 272.45 temperature 15.0 720 < th dose dependent rect. 20 10
396 272.45 temperature 15.0 720 < th dose dependent rect. 19 15
399 272.45 temperature 15.0 720 < th dose dependent rect. 17 18
403 272.45 temperature 15.0 720 < th dose dependent rect. 9 21
405 272.45 temperature 15.0 720 < th dose dependent rect. 17 21
449 272.46 temperature 15.0 720 < th dose dependent rect. 4 23
452 272.46 temperature 15.0 720 < th dose dependent rect. 21 23
466 272.47 temperature 15.0 1440 > th dose independent rect. 21 21
468 272.47 temperature 15.0 720 < th dose dependent sin 10 NA
479 272.48 precipitation 0.1 1440 < th dose independent rect. 6 4
486 272.48 precipitation 0.1 1440 < th dose dependent rect. 6 4
529 272.51 wind 9.0 1440 > th dose independent rect. 21 13
560 272.53 temperature 15.0 1440 < th dose independent sin 21 NA
573 272.54 radiation 1.0 1440 > th dose independent rect. 8 1
588 272.55 temperature 15.0 1440 > th dose independent sin 2 NA
603 272.56 temperature 15.0 1440 > th dose independent rect. 5 1
604 272.56 temperature 15.0 1440 < th dose independent rect. 24 1
612 272.56 temperature 15.0 1440 < th dose dependent sin 22 NA
613 272.56 temperature 15.0 720 < th dose dependent rect. 23 3
619 272.57 wind 9.0 1440 > th dose independent rect. 1 9
625 272.57 temperature 15.0 1440 > th dose independent rect. 14 23
651 272.60 humidity 90.0 1440 > th dose independent rect. 7 6
711 272.66 precipitation 0.1 1440 > th dose independent rect. 10 1
718 272.66 precipitation 0.1 1440 > th dose dependent rect. 10 1
731 272.67 temperature 15.0 1440 < th dose dependent sin 0 NA
732 272.67 temperature 15.0 4320 < th dose dependent rect. 6 6
783 272.71 precipitation 0.1 1440 > th dose independent rect. 23 4
786 272.71 temperature 20.0 1440 < th dose dependent rect. 9 2
787 272.71 precipitation 0.1 1440 > th dose dependent rect. 23 4
792 272.72 temperature 15.0 1440 > th dose independent sin 12 NA
809 272.73 temperature 15.0 1440 > th dose independent rect. 12 20
813 272.74 temperature 15.0 4320 < th dose independent rect. 5 7
822 272.75 temperature 15.0 720 > th dose independent sin 22 NA
837 272.75 temperature 20.0 10 < th dose dependent rect. 19 18
879 272.79 temperature 20.0 720 < th dose independent rect. 10 5
893 272.80 temperature 20.0 10 < th dose dependent sin 5 NA
905 272.81 temperature 15.0 1440 > th dose independent rect. 12 17
932 272.83 wind 1.0 10 < th dose independent rect. 3 1
934 272.83 temperature 20.0 720 < th dose independent rect. 11 3
954 272.85 temperature 15.0 90 > th dose independent sin 20 NA
956 272.85 temperature 15.0 90 > th dose independent sin 5 NA
970 272.86 temperature 15.0 1440 > th dose independent rect. 21 6
981 272.87 radiation 20.0 4320 < th dose independent rect. 5 1
993 272.87 wind 9.0 1440 > th dose dependent rect. 1 9