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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0527400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.54 (0.0392) R2 : 0.461
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.745 (0.103) R2dC : 0.0665 R2C : 0.134
β3 : 2.58 (0.16) R2dE : 0.33 R2E : 0.388
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.147 (0.0829) R2dN8 : 0.00488 R2N8 : -0.00516
σ : 0.733
deviance : 247.97
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_____
C
peak time of C : 8.03
E
wheather : wind
threshold : 0.7015
memory length : 328
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 4.12
open length of G : 0.121

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
237.66 0.724 3.62 -1.04 0.578 3.77 -1.2 -9.07 0.104 8.77 0.9298 338 4.03 0.396
244.82 0.729 3.55 -0.464 0.881 2.96 -0.715 -- 0.249 8.4 0.7991 314 4.19 0.05
241.91 0.724 3.63 -1.1 0.602 3.75 -- -9.67 0.0979 8.14 0.9377 337 4.04 0.383
242.33 0.725 3.55 -0.462 0.742 2.63 -- -- 0.0987 7.99 0.7209 324 4.12 0.133
259.5 0.75 3.64 -1.13 -- 3.94 -- -9 0.13 -- 0.9388 341 4.04 0.383
378.38 0.912 3.57 -0.288 1.23 -- 0.365 -- -0.0696 6.75 -- -- -- --
378.68 0.911 3.57 -0.281 1.23 -- -- -- -0.0701 6.83 -- -- -- --
263.27 0.756 3.57 -0.497 -- 2.9 -- -- 0.0812 -- 0.9075 328 4.08 0.182
247.97 0.733 3.54 -- 0.745 2.58 -- -- 0.147 8.03 0.7015 328 4.12 0.121
458.13 1 3.6 -0.254 -- -- -- -- -0.0464 -- -- -- -- --
380.76 0.913 3.57 -- 1.23 -- -- -- -0.0388 6.85 -- -- -- --
269.73 0.765 3.56 -- -- 2.86 -- -- 0.134 -- 0.9005 337 4.08 0.174
459.84 1 3.59 -- -- -- -- -- -0.0182 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 249.68 wind 1 270 < th dose dependent rect. 4 1
2 251.70 wind 1 270 < th dose independent rect. 4 1
5 257.50 temperature 25 720 > th dose dependent rect. 20 3
7 259.17 temperature 30 1440 > th dose dependent rect. 18 1
46 266.52 humidity 50 1440 < th dose independent rect. 16 1
48 267.16 humidity 50 1440 < th dose dependent rect. 16 1
54 271.11 humidity 70 720 < th dose independent rect. 19 1
65 271.29 humidity 70 1440 > th dose independent rect. 19 1
66 271.36 humidity 70 1440 > th dose independent rect. 19 10
68 271.40 humidity 70 1440 > th dose independent rect. 19 8
76 271.86 humidity 70 1440 > th dose independent rect. 19 12
77 271.87 humidity 50 1440 > th dose independent rect. 16 1
92 273.51 humidity 70 720 < th dose dependent rect. 19 1
179 279.66 temperature 30 720 > th dose independent rect. 18 1
235 283.48 temperature 30 1440 < th dose independent rect. 18 6
248 283.65 temperature 30 1440 < th dose independent rect. 18 4
270 284.67 humidity 90 90 > th dose dependent rect. 4 1
275 285.51 temperature 30 1440 < th dose independent rect. 18 10
281 285.84 temperature 20 90 > th dose dependent rect. 4 1
284 286.11 wind 1 90 < th dose dependent rect. 4 13
294 287.12 temperature 20 90 > th dose independent rect. 4 1
297 287.53 temperature 30 1440 < th dose independent rect. 18 14
319 288.07 temperature 20 10 > th dose dependent rect. 4 2
339 288.78 wind 1 1440 > th dose independent rect. 4 1
341 289.20 temperature 20 90 > th dose dependent rect. 3 3
363 289.90 humidity 90 90 > th dose independent rect. 4 1
380 290.19 wind 1 30 < th dose independent rect. 2 6
430 291.63 temperature 20 10 > th dose dependent rect. 2 4
504 293.10 temperature 20 270 > th dose dependent rect. 1 5
557 293.74 temperature 30 1440 > th dose dependent sin 12 NA
610 294.72 temperature 30 1440 < th dose independent sin 12 NA
711 295.49 temperature 30 1440 > th dose independent sin 12 NA
714 295.54 humidity 70 1440 < th dose dependent sin 12 NA
739 295.76 wind 1 30 > th dose independent sin 4 NA
775 296.35 temperature 20 10 > th dose independent rect. 4 2
827 296.79 temperature 20 90 > th dose independent rect. 3 3
852 297.14 radiation 1 720 > th dose independent rect. 18 11
874 297.42 radiation 20 1440 > th dose dependent rect. 16 16
913 297.64 temperature 25 90 < th dose independent rect. 4 1
954 297.92 radiation 1 720 > th dose independent rect. 18 1
965 297.95 humidity 60 1440 < th dose independent sin 13 NA
967 297.97 radiation 30 1440 > th dose independent rect. 7 1
987 298.10 humidity 60 1440 > th dose independent sin 13 NA