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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0527000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.39 (0.0603) R2 : 0.162
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.83 (0.231) R2dE : 0.128 R2E : 0.00636
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.01 (0.133) R2dN8 : 0.155 R2N8 : 0.0342
σ : 1.12
deviance : 574.39
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_____
C
peak time of C : --
E
wheather : radiation
threshold : 2.825
memory length : 40295
response mode : < th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 8.28
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
545.46 1.1 3.41 0.00252 0.23 0.971 -1.59 4.11 0.819 17.2 2.596 43043 8.72 --
561.03 1.1 3.42 0.558 0.159 1.37 -1.5 -- 0.811 17.2 2.821 40335 8.75 --
548.3 1.09 3.42 0.159 0.322 0.869 -- 4.28 0.817 16.7 2.68 42615 8.43 --
561.36 1.1 3.39 0.722 0.184 1.76 -- -- 1.08 17 2.72 40270 8.48 --
553.43 1.1 3.37 0.0481 -- 0.557 -- 5.01 0.758 -- 3.5 43009 8.95 --
623.93 1.17 3.45 0.82 0.216 -- -1.72 -- 0.754 17.5 -- -- -- --
630.68 1.18 3.45 0.828 0.223 -- -- -- 0.747 15.8 -- -- -- --
563.11 1.11 3.39 0.711 -- 1.71 -- -- 1.08 -- 2.718 40290 8.54 --
573.37 1.12 3.39 -- 0.187 1.9 -- -- 1.08 17.1 2.82 40280 8.17 --
633.43 1.18 3.45 0.819 -- -- -- -- 0.741 -- -- -- -- --
648.77 1.19 3.47 -- 0.207 -- -- -- 0.655 15.9 -- -- -- --
574.39 1.12 3.39 -- -- 1.83 -- -- 1.01 -- 2.825 40295 8.28 --
651.13 1.19 3.47 -- -- -- -- -- 0.65 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 534.70 precipitation 0.1 43200 > th dose independent rect. 22 3
2 534.70 precipitation 0.1 43200 > th dose dependent rect. 22 3
3 534.76 precipitation 0.1 43200 < th dose independent rect. 22 3
4 534.76 precipitation 0.1 43200 < th dose dependent rect. 22 3
5 534.81 wind 1.0 14400 < th dose dependent rect. 22 1
10 535.30 precipitation 0.1 43200 > th dose dependent rect. 22 5
11 535.37 wind 1.0 14400 < th dose independent rect. 22 4
12 535.43 precipitation 0.1 43200 < th dose independent rect. 22 5
13 535.43 precipitation 0.1 43200 < th dose dependent rect. 22 5
14 535.47 wind 1.0 14400 > th dose independent rect. 22 4
15 535.54 precipitation 0.1 43200 > th dose independent rect. 22 5
16 535.82 wind 1.0 14400 < th dose dependent rect. 22 5
36 537.82 precipitation 0.1 43200 < th dose independent rect. 2 1
37 537.82 precipitation 0.1 43200 < th dose dependent rect. 2 1
40 537.91 precipitation 0.1 43200 > th dose dependent rect. 2 1
41 537.92 precipitation 0.1 43200 < th dose independent rect. 21 8
42 537.92 precipitation 0.1 43200 < th dose dependent rect. 21 8
44 538.01 precipitation 0.1 43200 > th dose independent rect. 21 8
45 538.04 precipitation 0.1 43200 > th dose independent rect. 2 1
70 539.09 humidity 90.0 14400 < th dose dependent rect. 5 2
75 539.36 humidity 80.0 14400 > th dose dependent rect. 2 5
83 539.67 wind 1.0 14400 < th dose dependent rect. 5 21
114 540.20 wind 1.0 14400 < th dose independent rect. 22 1
120 540.38 wind 1.0 14400 > th dose independent rect. 5 21
123 540.43 humidity 80.0 14400 > th dose dependent rect. 1 3
128 540.47 wind 1.0 14400 < th dose independent rect. 5 21
196 541.40 humidity 90.0 14400 < th dose dependent rect. 22 9
235 541.91 humidity 80.0 43200 < th dose independent rect. 18 1
248 542.13 humidity 80.0 43200 > th dose independent rect. 18 2
267 542.45 humidity 70.0 14400 > th dose dependent rect. 5 1
278 542.75 humidity 90.0 14400 < th dose dependent rect. 22 6
288 542.87 humidity 70.0 43200 > th dose dependent rect. 23 1
291 542.94 humidity 50.0 43200 > th dose dependent rect. 23 1
303 543.14 humidity 90.0 14400 < th dose dependent rect. 23 4
313 543.23 wind 1.0 43200 > th dose independent rect. 22 1
321 543.34 wind 1.0 14400 < th dose dependent rect. 22 18
322 543.35 wind 1.0 14400 < th dose dependent rect. 22 20
361 543.75 humidity 80.0 43200 < th dose independent rect. 8 1
369 543.78 humidity 70.0 43200 > th dose dependent rect. 22 10
371 543.79 humidity 70.0 43200 > th dose independent rect. 14 1
487 544.40 precipitation 0.1 43200 < th dose independent sin 11 NA
488 544.40 precipitation 0.1 43200 < th dose dependent sin 11 NA
494 544.42 precipitation 0.1 43200 > th dose independent sin 11 NA
533 544.53 humidity 70.0 43200 < th dose independent rect. 15 1
564 544.69 humidity 80.0 43200 > th dose independent rect. 8 1
566 544.69 radiation 10.0 43200 < th dose dependent rect. 17 1
573 544.74 wind 1.0 14400 < th dose dependent rect. 17 22
578 544.78 wind 1.0 14400 < th dose dependent rect. 10 23
623 544.93 wind 1.0 14400 < th dose dependent rect. 15 23
642 544.99 wind 1.0 14400 > th dose independent rect. 5 14
666 545.05 wind 1.0 14400 < th dose dependent no NA NA
667 545.05 humidity 70.0 43200 > th dose dependent sin 10 NA
675 545.07 radiation 10.0 43200 < th dose dependent rect. 15 3
681 545.10 humidity 80.0 43200 < th dose independent rect. 2 18
702 545.14 humidity 80.0 43200 < th dose independent rect. 22 22
716 545.18 radiation 10.0 43200 < th dose dependent rect. 15 9
721 545.19 radiation 10.0 43200 < th dose dependent rect. 15 6
731 545.20 radiation 1.0 43200 < th dose independent rect. 2 4
738 545.21 radiation 1.0 43200 < th dose independent rect. 20 10
745 545.23 radiation 1.0 43200 < th dose independent rect. 23 7
749 545.24 radiation 1.0 43200 > th dose independent rect. 4 2
802 545.33 wind 1.0 14400 < th dose dependent sin 13 NA
809 545.36 humidity 80.0 43200 < th dose independent rect. 16 22
828 545.38 humidity 80.0 43200 > th dose independent rect. 16 21
889 545.52 wind 1.0 14400 < th dose independent rect. 6 12
905 545.56 humidity 80.0 43200 < th dose independent rect. 16 9
931 545.62 wind 1.0 14400 < th dose independent rect. 5 14
954 545.67 humidity 80.0 43200 < th dose independent rect. 12 21
979 545.75 humidity 80.0 43200 > th dose independent rect. 2 18