Os05g0526300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0526300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.34 | 0.217 | 10.4 | -0.446 | 0.876 | -0.309 | 0.0779 | 0.277 | 0.105 | 3.32 | 68.65 | 787 | -- | -- |
| 21.47 | 0.216 | 10.4 | -0.464 | 0.875 | -0.294 | 0.0784 | -- | 0.101 | 3.33 | 68.58 | 786 | -- | -- |
| 21.32 | 0.215 | 10.4 | -0.452 | 0.877 | -0.307 | -- | 0.299 | 0.0982 | 3.32 | 67.9 | 791 | -- | -- |
| 21.47 | 0.216 | 10.4 | -0.469 | 0.878 | -0.292 | -- | -- | 0.0951 | 3.34 | 68 | 791 | -- | -- |
| 39.17 | 0.292 | 10.4 | -0.435 | -- | -0.69 | -- | -0.13 | 0.155 | -- | 75 | 307 | -- | -- |
| 23.36 | 0.227 | 10.4 | -0.505 | 0.92 | -- | 0.131 | -- | 0.108 | 3.87 | -- | -- | -- | -- |
| 23.41 | 0.227 | 10.4 | -0.507 | 0.92 | -- | -- | -- | 0.107 | 3.88 | -- | -- | -- | -- |
| 39.21 | 0.292 | 10.4 | -0.431 | -- | -0.675 | -- | -- | 0.159 | -- | 74.99 | 303 | -- | -- |
| 27.19 | 0.243 | 10.4 | -- | 0.889 | -0.331 | -- | -- | 0.145 | 3.23 | 68 | 819 | -- | -- |
| 69.92 | 0.391 | 10.4 | -0.469 | -- | -- | -- | -- | 0.132 | -- | -- | -- | -- | -- |
| 30.19 | 0.257 | 10.4 | -- | 0.91 | -- | -- | -- | 0.164 | 3.88 | -- | -- | -- | -- |
| 44.08 | 0.309 | 10.4 | -- | -- | -0.683 | -- | -- | 0.205 | -- | 75 | 299 | -- | -- |
| 75.72 | 0.406 | 10.4 | -- | -- | -- | -- | -- | 0.184 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.19 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 1 |
| 2 | 20.53 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 2 |
| 3 | 20.53 | wind | 1.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 4 | 20.55 | radiation | 10.0 | 720 | < th | dose independent | rect. | 17 | 10 |
| 5 | 20.67 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 3 | 2 |
| 6 | 20.68 | radiation | 10.0 | 720 | < th | dose independent | rect. | 17 | 1 |
| 14 | 20.82 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 18 | 20.84 | wind | 1.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 20 | 20.86 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 22 | 20.91 | temperature | 20.0 | 30 | > th | dose independent | rect. | 17 | 12 |
| 23 | 20.92 | humidity | 70.0 | 720 | < th | dose independent | rect. | 12 | 6 |
| 24 | 20.92 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 14 |
| 25 | 20.92 | humidity | 70.0 | 720 | > th | dose independent | rect. | 9 | 20 |
| 33 | 20.98 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 45 | 20.99 | humidity | 70.0 | 720 | > th | dose independent | rect. | 24 | 19 |
| 48 | 21.00 | humidity | 70.0 | 720 | > th | dose independent | rect. | 10 | 9 |
| 49 | 21.00 | wind | 1.0 | 43200 | < th | dose independent | rect. | 15 | 16 |
| 64 | 21.03 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 12 | 3 |
| 80 | 21.07 | humidity | 70.0 | 720 | < th | dose independent | rect. | 14 | 4 |
| 86 | 21.08 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 90 | 21.08 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 98 | 21.11 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 11 |
| 100 | 21.11 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 15 |
| 103 | 21.12 | humidity | 90.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 112 | 21.12 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 113 | 21.13 | wind | 1.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 115 | 21.13 | radiation | 10.0 | 720 | < th | dose independent | rect. | 15 | 4 |
| 127 | 21.14 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 11 |
| 128 | 21.14 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 145 | 21.16 | wind | 1.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 155 | 21.16 | wind | 3.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 159 | 21.17 | temperature | 25.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 160 | 21.17 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 1 |
| 168 | 21.17 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 169 | 21.18 | wind | 1.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 178 | 21.18 | radiation | 30.0 | 270 | < th | dose independent | rect. | 13 | 15 |
| 183 | 21.18 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 188 | 21.18 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 191 | 21.19 | humidity | 70.0 | 720 | < th | dose independent | sin | 18 | NA |
| 198 | 21.19 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 216 | 21.19 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 217 | 21.19 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 218 | 21.19 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 220 | 21.20 | wind | 9.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 221 | 21.20 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 224 | 21.20 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 228 | 21.20 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 230 | 21.20 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 232 | 21.20 | radiation | 1.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 254 | 21.20 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 271 | 21.22 | humidity | 70.0 | 720 | < th | dose independent | rect. | 12 | 1 |
| 279 | 21.22 | radiation | 30.0 | 720 | < th | dose independent | rect. | 15 | 14 |
| 288 | 21.22 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 24 | 19 |
| 297 | 21.23 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 9 | 10 |
| 300 | 21.23 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 2 | 21 |
| 319 | 21.24 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 21 | 5 |
| 320 | 21.24 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 344 | 21.25 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 6 | 22 |
| 365 | 21.26 | radiation | 10.0 | 720 | < th | dose independent | rect. | 7 | 21 |
| 375 | 21.27 | radiation | 10.0 | 720 | < th | dose independent | rect. | 15 | 6 |
| 393 | 21.28 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 14 |
| 399 | 21.28 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 401 | 21.28 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 14 |
| 405 | 21.29 | wind | 3.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 411 | 21.29 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 21 |
| 416 | 21.29 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 417 | 21.29 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 418 | 21.29 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 21 | 5 |
| 446 | 21.31 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 16 | 16 |
| 447 | 21.31 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 13 | 16 |
| 454 | 21.32 | temperature | 25.0 | 30 | > th | dose independent | rect. | 1 | 5 |
| 480 | 21.34 | humidity | 70.0 | 720 | > th | dose independent | sin | 19 | NA |
| 491 | 21.34 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 495 | 21.34 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 17 | 12 |
| 498 | 21.34 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 20 |
| 502 | 21.34 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 509 | 21.35 | radiation | 30.0 | 270 | < th | dose independent | rect. | 10 | 9 |
| 513 | 21.35 | radiation | 30.0 | 270 | < th | dose independent | rect. | 11 | 18 |
| 516 | 21.35 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 3 |
| 520 | 21.35 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 14 |
| 531 | 21.36 | wind | 1.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 547 | 21.37 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 19 |
| 580 | 21.38 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 585 | 21.38 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 2 | 19 |
| 590 | 21.39 | humidity | 70.0 | 720 | > th | dose independent | sin | 15 | NA |
| 633 | 21.39 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 21 |
| 648 | 21.39 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 2 | 12 |
| 662 | 21.40 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 17 |
| 673 | 21.40 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 12 | 8 |
| 682 | 21.41 | humidity | 90.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 692 | 21.41 | temperature | 20.0 | 30 | > th | dose independent | rect. | 15 | 14 |
| 717 | 21.41 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 6 | 13 |
| 719 | 21.41 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 22 |
| 721 | 21.42 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 757 | 21.43 | radiation | 10.0 | 720 | < th | dose independent | rect. | 7 | 12 |
| 772 | 21.43 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 5 |
| 778 | 21.43 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 24 | 15 |
| 809 | 21.44 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 12 |
| 816 | 21.45 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 817 | 21.45 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 818 | 21.45 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 843 | 21.45 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 879 | 21.46 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 913 | 21.47 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 2 | 17 |
| 916 | 21.47 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 17 | 20 |
| 923 | 21.48 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 947 | 21.49 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 949 | 21.49 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 952 | 21.49 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 956 | 21.49 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 966 | 21.49 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 967 | 21.49 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 968 | 21.49 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 987 | 21.49 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |