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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0525000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.19 (0.0187) R2 : 0.00577
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0639 (0.0393) R2dN8 : 0.00745 R2N8 : 0.00577
σ : 0.352
deviance : 56.74
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
53.15 0.343 3.22 0.253 0.206 -0.222 0.0129 -0.981 -0.00546 5.99 87 4854 -- --
54.48 0.344 3.2 0.112 0.198 -0.158 -0.106 -- -0.00684 5.99 87.61 4812 -- --
53.15 0.34 3.22 0.252 0.206 -0.222 -- -0.978 -0.0055 6 86.99 4860 -- --
54.5 0.344 3.2 0.112 0.193 -0.164 -- -- -0.00602 5.86 87.39 4667 -- --
54.97 0.345 3.22 0.252 -- -0.199 -- -0.966 0.0166 -- 86.16 5513 -- --
54.91 0.347 3.19 0.0822 0.176 -- -0.118 -- 0.0691 6.01 -- -- -- --
54.94 0.347 3.19 0.081 0.176 -- -- -- 0.0694 5.92 -- -- -- --
56.19 0.349 3.2 0.113 -- -0.144 -- -- 0.0182 -- 86 5516 -- --
54.77 0.345 3.2 -- 0.192 -0.147 -- -- -0.0122 5.82 87 4686 -- --
56.54 0.351 3.19 0.0862 -- -- -- -- 0.0735 -- -- -- -- --
55.12 0.347 3.19 -- 0.177 -- -- -- 0.0604 5.9 -- -- -- --
56.5 0.35 3.2 -- -- -0.128 -- -- 0.00736 -- 86 5522 -- --
56.74 0.352 3.19 -- -- -- -- -- 0.0639 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 51.18 temperature 25.0 30 > th dose dependent rect. 6 1
2 51.21 temperature 15.0 10 > th dose dependent rect. 2 1
3 51.22 humidity 90.0 30 > th dose dependent rect. 2 1
4 51.23 wind 3.0 10 < th dose independent rect. 2 1
5 51.24 wind 3.0 10 < th dose dependent rect. 2 1
15 51.35 humidity 90.0 10 > th dose independent rect. 2 1
18 51.38 atmosphere 1010.0 30 < th dose independent rect. 6 1
20 51.40 wind 9.0 10 < th dose independent rect. 2 1
21 51.40 temperature 10.0 10 > th dose independent rect. 2 1
23 51.40 temperature 30.0 10 < th dose independent rect. 2 1
24 51.40 humidity 50.0 10 > th dose independent rect. 2 1
27 51.40 atmosphere 995.0 10 > th dose independent rect. 2 1
28 51.40 atmosphere 1010.0 10 < th dose independent rect. 2 1
30 51.40 radiation 1.0 10 < th dose independent rect. 2 1
35 51.40 precipitation 0.1 10 < th dose independent rect. 2 1
36 51.40 temperature 10.0 10 > th dose independent rect. 3 23
37 51.40 radiation 1.0 10 < th dose dependent rect. 2 1
42 51.40 precipitation 0.1 10 < th dose dependent rect. 2 1
46 51.42 wind 9.0 720 < th dose independent rect. 19 8
47 51.42 temperature 15.0 720 > th dose independent rect. 15 16
48 51.44 radiation 10.0 30 < th dose independent rect. 6 1
50 51.49 temperature 15.0 720 > th dose independent rect. 19 8
51 51.49 atmosphere 1015.0 30 < th dose dependent rect. 2 1
52 51.52 atmosphere 995.0 10 > th dose dependent rect. 2 1
60 51.56 temperature 30.0 720 < th dose independent rect. 19 8
61 51.56 humidity 50.0 720 > th dose independent rect. 19 8
62 51.56 atmosphere 995.0 720 > th dose independent rect. 19 8
63 51.56 radiation 1.0 720 < th dose independent rect. 19 8
68 51.56 temperature 10.0 720 > th dose independent rect. 3 16
70 51.56 radiation 1.0 720 < th dose dependent rect. 19 8
77 51.58 temperature 10.0 720 > th dose independent rect. 7 8
78 51.58 atmosphere 1015.0 720 < th dose independent rect. 7 8
114 51.63 radiation 40.0 720 < th dose independent rect. 15 16
116 51.64 atmosphere 1015.0 720 < th dose independent rect. 3 16
117 51.64 wind 9.0 30 < th dose independent rect. 3 23
123 51.67 wind 3.0 30 > th dose dependent rect. 6 1
124 51.67 temperature 30.0 30 < th dose dependent rect. 2 1
130 51.73 wind 9.0 720 < th dose independent rect. 15 16
135 51.76 wind 1.0 30 > th dose independent rect. 2 1
138 51.83 precipitation 0.1 720 < th dose independent rect. 7 8
139 51.83 precipitation 0.1 720 < th dose dependent rect. 7 8
140 51.87 atmosphere 995.0 720 > th dose independent rect. 7 8
141 51.89 humidity 90.0 90 < th dose independent rect. 2 6
144 51.96 temperature 25.0 30 > th dose dependent rect. 4 3
147 52.07 atmosphere 1010.0 30 < th dose dependent rect. 6 1
148 52.08 precipitation 0.1 30 < th dose independent rect. 3 23
149 52.08 precipitation 0.1 30 < th dose dependent rect. 3 23
151 52.17 humidity 90.0 90 < th dose dependent rect. 2 5
154 52.24 humidity 90.0 30 < th dose dependent rect. 6 1
157 52.31 temperature 25.0 90 > th dose independent rect. 1 6
158 52.31 wind 9.0 720 < th dose independent rect. 7 8
164 52.42 precipitation 0.1 720 < th dose independent rect. 19 8
165 52.42 precipitation 0.1 720 < th dose dependent rect. 19 8
166 52.45 wind 3.0 30 > th dose independent rect. 6 1
168 52.45 radiation 1.0 720 < th dose dependent rect. 21 8
170 52.49 precipitation 0.1 30 < th dose independent rect. 21 23
171 52.49 precipitation 0.1 30 < th dose dependent rect. 21 23
173 52.53 precipitation 0.1 720 < th dose independent rect. 15 16
174 52.53 atmosphere 995.0 10 > th dose independent rect. 3 23
176 52.53 precipitation 0.1 720 < th dose dependent rect. 15 16
178 52.54 humidity 80.0 14400 < th dose dependent rect. 22 11
181 52.58 humidity 80.0 10 < th dose independent rect. 7 1
183 52.58 wind 9.0 720 < th dose independent rect. 3 16
184 52.59 temperature 15.0 720 > th dose independent rect. 21 8
186 52.61 radiation 10.0 30 > th dose independent rect. 7 1
191 52.65 radiation 1.0 10 > th dose dependent rect. 6 1
193 52.66 temperature 25.0 30 > th dose dependent rect. 2 5
196 52.67 radiation 10.0 43200 < th dose dependent rect. 21 1
197 52.68 temperature 25.0 30 > th dose independent rect. 6 1
198 52.68 humidity 80.0 14400 < th dose independent rect. 7 1
199 52.68 radiation 1.0 720 < th dose independent rect. 21 8
207 52.69 humidity 90.0 10 < th dose dependent rect. 3 5
210 52.70 temperature 10.0 720 > th dose independent rect. 9 8
212 52.70 temperature 30.0 720 < th dose independent rect. 21 8
213 52.70 humidity 50.0 720 > th dose independent rect. 21 8
216 52.70 atmosphere 995.0 720 > th dose independent rect. 21 8
217 52.70 atmosphere 1015.0 720 < th dose independent rect. 9 8
221 52.70 temperature 10.0 720 > th dose independent rect. 5 16
222 52.70 temperature 10.0 720 > th dose independent rect. 17 16
223 52.70 atmosphere 995.0 720 > th dose dependent rect. 8 1
224 52.70 radiation 20.0 30 < th dose dependent rect. 6 1
232 52.73 radiation 1.0 90 < th dose independent rect. 21 22
233 52.73 atmosphere 995.0 10 > th dose independent rect. 21 23
237 52.74 temperature 25.0 90 > th dose independent rect. 20 1
243 52.74 humidity 80.0 14400 < th dose dependent rect. 4 4
251 52.76 atmosphere 995.0 720 > th dose independent rect. 3 16
255 52.77 wind 1.0 90 > th dose independent rect. 8 11
260 52.79 atmosphere 995.0 90 > th dose independent rect. 8 11
265 52.80 atmosphere 1015.0 720 < th dose independent rect. 5 16
266 52.80 humidity 80.0 30 > th dose dependent rect. 20 1
275 52.82 temperature 20.0 10 > th dose dependent rect. 20 1
278 52.82 atmosphere 995.0 90 > th dose dependent rect. 8 11
282 52.83 wind 7.0 14400 < th dose dependent rect. 11 1
285 52.83 humidity 50.0 30 > th dose dependent rect. 20 1
287 52.83 atmosphere 1015.0 30 < th dose dependent rect. 20 1
291 52.84 wind 1.0 30 > th dose independent rect. 20 1
293 52.84 wind 5.0 30 < th dose independent rect. 20 1
296 52.84 temperature 10.0 30 > th dose independent rect. 20 1
299 52.84 temperature 30.0 30 < th dose independent rect. 20 1
300 52.84 humidity 50.0 30 > th dose independent rect. 20 1
304 52.84 atmosphere 995.0 30 > th dose independent rect. 20 1
305 52.84 atmosphere 1010.0 30 < th dose independent rect. 20 1
307 52.84 radiation 1.0 30 < th dose independent rect. 20 1
312 52.84 precipitation 0.1 30 < th dose independent rect. 20 1
316 52.84 temperature 10.0 30 > th dose independent rect. 21 23
318 52.84 wind 7.0 30 < th dose dependent rect. 20 1
323 52.84 radiation 1.0 30 < th dose dependent rect. 20 1
329 52.84 precipitation 0.1 30 < th dose dependent rect. 20 1
333 52.85 atmosphere 1005.0 30 > th dose independent rect. 20 1
334 52.85 temperature 25.0 90 > th dose independent rect. 4 3
335 52.85 wind 9.0 720 < th dose independent rect. 21 8
337 52.85 wind 1.0 30 > th dose dependent rect. 20 1
342 52.85 atmosphere 995.0 30 > th dose dependent rect. 20 1
351 52.86 temperature 10.0 1440 > th dose independent rect. 21 1
355 52.86 temperature 30.0 1440 < th dose independent rect. 21 1
359 52.86 humidity 50.0 1440 > th dose independent rect. 21 1
368 52.86 atmosphere 995.0 1440 > th dose independent rect. 21 1
369 52.86 radiation 1.0 1440 < th dose independent rect. 21 1
390 52.86 wind 7.0 90 < th dose independent rect. 19 13
392 52.86 temperature 10.0 1440 > th dose independent rect. 22 23
421 52.87 wind 9.0 30 < th dose independent rect. 21 23
424 52.87 wind 1.0 14400 > th dose dependent rect. 11 1
438 52.88 humidity 90.0 30 < th dose independent rect. 20 1
442 52.88 temperature 30.0 30 < th dose dependent rect. 20 1
443 52.88 humidity 90.0 30 < th dose dependent rect. 20 1
447 52.89 wind 9.0 1440 < th dose independent rect. 21 1
453 52.90 precipitation 0.1 720 < th dose independent rect. 3 16
458 52.90 precipitation 0.1 720 < th dose dependent rect. 3 16
475 52.91 radiation 40.0 720 < th dose independent rect. 17 16
479 52.92 humidity 70.0 720 > th dose independent rect. 19 2
486 52.93 precipitation 0.1 10 < th dose independent rect. 22 8
491 52.93 precipitation 0.1 10 < th dose dependent rect. 22 8
505 52.97 precipitation 0.1 30 < th dose independent rect. 7 23
508 52.97 precipitation 0.1 30 < th dose dependent rect. 7 23
513 52.98 wind 9.0 4320 < th dose independent rect. 7 2
516 52.98 atmosphere 1000.0 30 > th dose independent rect. 8 22
528 53.01 humidity 80.0 14400 < th dose independent rect. 3 6
531 53.01 precipitation 0.1 90 < th dose independent rect. 8 11
537 53.01 precipitation 0.1 90 < th dose dependent rect. 8 11
539 53.02 temperature 10.0 1440 > th dose independent rect. 7 1
543 53.02 temperature 30.0 1440 < th dose independent rect. 7 1
547 53.02 humidity 50.0 1440 > th dose independent rect. 7 1
552 53.02 atmosphere 995.0 1440 > th dose independent rect. 7 1
553 53.02 atmosphere 1015.0 1440 < th dose independent rect. 7 1
555 53.02 temperature 10.0 90 > th dose independent rect. 8 11
556 53.02 atmosphere 1015.0 90 < th dose independent rect. 8 11
557 53.02 temperature 10.0 90 > th dose independent rect. 19 13
558 53.02 temperature 30.0 90 < th dose independent rect. 19 13
559 53.02 humidity 50.0 90 > th dose independent rect. 19 13
561 53.02 atmosphere 995.0 90 > th dose independent rect. 19 13
562 53.02 atmosphere 995.0 720 > th dose independent rect. 15 16
563 53.02 temperature 10.0 1440 > th dose independent rect. 8 23
575 53.04 atmosphere 1000.0 30 > th dose independent rect. 6 1
587 53.05 atmosphere 995.0 10 > th dose independent rect. 8 12
588 53.05 wind 9.0 720 < th dose independent rect. 17 16
589 53.05 radiation 10.0 10 > th dose independent rect. 16 16
596 53.06 humidity 90.0 90 < th dose independent rect. 1 20
604 53.07 humidity 80.0 14400 < th dose independent rect. 23 11
605 53.07 radiation 40.0 90 < th dose independent rect. 19 13
606 53.07 temperature 20.0 10 > th dose independent rect. 6 16
607 53.07 wind 9.0 30 < th dose independent rect. 7 23
612 53.08 wind 9.0 720 < th dose independent rect. 9 8
618 53.09 wind 5.0 30 < th dose independent rect. 6 1
621 53.09 temperature 10.0 30 > th dose independent rect. 6 1
623 53.09 temperature 30.0 30 < th dose independent rect. 6 1
624 53.09 humidity 50.0 30 > th dose independent rect. 6 1
632 53.09 precipitation 0.1 30 < th dose independent rect. 6 1
634 53.09 radiation 30.0 1440 < th dose independent rect. 23 8
638 53.09 temperature 10.0 30 > th dose independent rect. 7 23
641 53.09 precipitation 0.1 30 < th dose dependent rect. 6 1
644 53.09 temperature 25.0 10 > th dose dependent rect. 20 12
647 53.10 temperature 25.0 720 > th dose independent rect. 1 1
655 53.10 humidity 90.0 720 < th dose independent rect. 1 1
667 53.10 precipitation 0.1 90 < th dose independent rect. 19 13
668 53.10 wind 9.0 10 < th dose independent rect. 6 16
676 53.10 precipitation 0.1 90 < th dose dependent rect. 19 13
678 53.11 wind 1.0 720 > th dose independent rect. 8 1
688 53.12 temperature 25.0 270 > th dose independent rect. 23 8
692 53.12 radiation 1.0 90 < th dose dependent rect. 21 22
707 53.14 wind 9.0 10 < th dose independent rect. 22 8
708 53.14 temperature 10.0 10 > th dose independent rect. 22 8
709 53.14 temperature 30.0 10 < th dose independent rect. 22 8
710 53.14 humidity 50.0 10 > th dose independent rect. 22 8
714 53.14 atmosphere 995.0 10 > th dose independent rect. 22 8
715 53.14 radiation 20.0 10 < th dose independent rect. 22 8
720 53.14 temperature 10.0 10 > th dose independent rect. 6 16
722 53.14 atmosphere 1015.0 10 < th dose independent rect. 6 16
725 53.15 precipitation 0.1 10 < th dose independent rect. 6 16
731 53.15 precipitation 0.1 10 < th dose dependent rect. 6 16
754 53.17 temperature 30.0 14400 > th dose independent rect. 17 1
757 53.17 humidity 90.0 4320 > th dose independent rect. 4 3
761 53.17 wind 7.0 10 < th dose independent rect. 20 12
767 53.18 wind 3.0 14400 > th dose independent rect. 11 2
769 53.18 temperature 10.0 1440 > th dose independent rect. 23 8
772 53.18 temperature 30.0 1440 < th dose independent rect. 23 8
776 53.18 humidity 50.0 1440 > th dose independent rect. 23 8
782 53.18 atmosphere 995.0 1440 > th dose independent rect. 23 8
787 53.18 wind 9.0 90 < th dose independent rect. 8 11
788 53.18 temperature 10.0 1440 > th dose independent rect. 9 11
792 53.18 temperature 10.0 1440 > th dose independent rect. 20 13
795 53.18 humidity 50.0 1440 > th dose independent rect. 20 13
797 53.18 atmosphere 995.0 1440 > th dose independent rect. 20 13
798 53.18 temperature 10.0 1440 > th dose independent rect. 7 16
811 53.20 humidity 90.0 4320 < th dose independent rect. 23 1
815 53.20 temperature 30.0 14400 > th dose dependent rect. 15 1
816 53.20 temperature 30.0 14400 > th dose dependent rect. 15 3
818 53.21 temperature 30.0 14400 < th dose independent rect. 17 1
833 53.21 wind 1.0 10 > th dose independent rect. 8 12
836 53.21 atmosphere 1015.0 90 < th dose independent rect. 19 13
840 53.21 humidity 50.0 720 > th dose dependent rect. 20 1
859 53.22 wind 3.0 14400 < th dose independent rect. 11 2
865 53.22 temperature 30.0 14400 > th dose dependent rect. 17 1
866 53.22 humidity 50.0 30 > th dose dependent rect. 6 1
878 53.23 temperature 30.0 14400 < th dose independent rect. 17 4
894 53.24 wind 1.0 30 < th dose independent rect. 6 1
899 53.24 humidity 50.0 720 > th dose independent rect. 7 8
903 53.24 humidity 80.0 14400 > th dose independent rect. 23 10
906 53.24 humidity 50.0 90 > th dose independent rect. 8 11
954 53.25 temperature 30.0 14400 > th dose dependent sin 12 NA
956 53.25 wind 9.0 30 < th dose dependent rect. 6 1
963 53.25 atmosphere 1015.0 30 < th dose dependent rect. 6 16
965 53.26 atmosphere 1015.0 720 < th dose independent rect. 20 1
978 53.26 temperature 10.0 10 > th dose independent rect. 8 12
980 53.26 temperature 10.0 10 > th dose independent rect. 20 12
981 53.26 temperature 30.0 10 < th dose independent rect. 20 12
982 53.26 humidity 50.0 10 > th dose independent rect. 20 12
984 53.26 atmosphere 995.0 10 > th dose independent rect. 20 12
985 53.26 atmosphere 1015.0 10 < th dose independent rect. 8 12
987 53.26 wind 9.0 720 < th dose independent rect. 5 16