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Os05g0524400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Phosphofructokinase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0212) R2 : 0.301
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.771 (0.0551) R2dC : 0.302 R2C : 0.301
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0141 (0.0445) R2dN8 : 2e-04 R2N8 : -0.00137
σ : 0.399
deviance : 72.86
__
_____
C
peak time of C : 19
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
56.9 0.354 10.6 0.572 0.81 0.249 0.88 -1.5 0.0927 18.7 91 30 -- --
59.75 0.36 10.6 0.63 0.861 0.39 1 -- 0.0688 18.7 94.87 353 -- --
56.45 0.35 10.6 0.535 0.748 0.0533 -- -2.34 0.0701 19 93.33 177 -- --
59.45 0.359 10.6 0.58 0.85 1.29 -- -- 0.0839 19 95.67 294 -- --
82.3 0.423 10.6 0.6 -- -0.241 -- -3.59 0.0324 -- 93.49 185 -- --
62.15 0.37 10.6 0.565 0.774 -- 1.09 -- 0.0446 18.7 -- -- -- --
65.02 0.378 10.6 0.545 0.777 -- -- -- 0.0466 19 -- -- -- --
80.93 0.419 10.6 0.609 -- -0.674 -- -- -0.00908 -- 67.33 478 -- --
67.79 0.383 10.6 -- 0.828 1.23 -- -- 0.00638 19 95.66 286 -- --
96.79 0.46 10.6 0.53 -- -- -- -- 0.0323 -- -- -- -- --
72.86 0.399 10.6 -- 0.771 -- -- -- -0.0141 19 -- -- -- --
88.6 0.438 10.6 -- -- -0.681 -- -- -0.0676 -- 64.5 500 -- --
104.19 0.476 10.6 -- -- -- -- -- -0.0265 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 48.26 radiation 1.0 1440 < th dose independent rect. 11 1
2 48.26 radiation 1.0 1440 < th dose dependent rect. 11 1
3 48.96 radiation 1.0 1440 < th dose dependent rect. 8 8
6 49.35 radiation 1.0 1440 < th dose dependent rect. 12 4
9 49.57 radiation 1.0 1440 < th dose independent rect. 8 6
32 50.42 radiation 1.0 1440 > th dose independent rect. 8 7
33 50.44 radiation 1.0 1440 < th dose independent rect. 13 1
51 50.90 radiation 1.0 1440 > th dose independent rect. 13 2
67 51.60 humidity 60.0 14400 > th dose independent rect. 23 9
71 51.84 humidity 60.0 14400 > th dose independent rect. 3 5
74 51.97 humidity 60.0 14400 > th dose independent rect. 5 3
78 52.14 humidity 60.0 14400 > th dose independent rect. 7 1
83 52.39 radiation 1.0 1440 > th dose independent rect. 8 2
85 52.40 humidity 90.0 720 > th dose dependent rect. 20 1
98 52.72 humidity 70.0 14400 < th dose dependent rect. 21 1
111 52.90 wind 7.0 4320 < th dose independent rect. 17 1
114 53.05 humidity 60.0 14400 < th dose independent rect. 6 1
116 53.05 humidity 60.0 14400 < th dose independent rect. 20 1
118 53.05 radiation 20.0 14400 > th dose independent rect. 17 1
169 53.05 humidity 60.0 14400 < th dose dependent rect. 6 1
173 53.05 radiation 20.0 14400 > th dose dependent rect. 17 1
224 53.07 wind 7.0 4320 > th dose independent rect. 17 1
229 53.17 humidity 90.0 720 > th dose dependent rect. 20 3
237 53.46 humidity 50.0 14400 < th dose dependent rect. 9 2
255 53.58 precipitation 0.1 270 > th dose independent rect. 2 2
256 53.60 precipitation 0.1 270 > th dose dependent rect. 2 2
257 53.66 temperature 25.0 720 < th dose independent rect. 14 13
272 53.93 radiation 40.0 14400 < th dose independent rect. 16 4
279 53.97 temperature 25.0 720 < th dose independent rect. 19 1
281 53.99 temperature 25.0 720 < th dose independent sin 15 NA
285 54.00 wind 5.0 4320 > th dose dependent rect. 18 1
287 54.03 temperature 30.0 10 < th dose dependent rect. 19 11
295 54.09 radiation 1.0 720 < th dose dependent rect. 14 6
296 54.09 atmosphere 1005.0 10 < th dose dependent rect. 24 8
297 54.10 temperature 15.0 14400 < th dose dependent rect. 4 1
301 54.16 temperature 15.0 14400 < th dose independent rect. 9 2
305 54.19 temperature 10.0 90 > th dose dependent rect. 15 17
310 54.22 temperature 30.0 30 < th dose dependent rect. 19 9
326 54.29 humidity 50.0 14400 < th dose independent rect. 9 1
334 54.34 radiation 40.0 90 < th dose dependent rect. 21 22
335 54.35 temperature 15.0 14400 > th dose independent rect. 8 4
343 54.38 atmosphere 1005.0 720 < th dose independent rect. 19 4
346 54.38 temperature 10.0 270 > th dose dependent rect. 21 10
347 54.39 temperature 15.0 14400 > th dose independent rect. 9 2
358 54.43 temperature 15.0 14400 < th dose independent rect. 24 1
366 54.45 temperature 15.0 270 > th dose independent rect. 17 10
371 54.46 radiation 1.0 270 < th dose independent rect. 12 15
377 54.47 temperature 15.0 90 > th dose independent rect. 19 9
381 54.47 atmosphere 1010.0 270 < th dose dependent rect. 22 8
393 54.51 radiation 1.0 720 < th dose independent rect. 14 6
401 54.53 atmosphere 1005.0 720 < th dose independent rect. 20 1
402 54.53 temperature 15.0 14400 < th dose independent rect. 21 4
406 54.54 humidity 50.0 14400 > th dose independent rect. 18 16
418 54.56 temperature 10.0 270 > th dose dependent rect. 13 17
425 54.57 radiation 40.0 30 < th dose dependent rect. 6 13
428 54.58 temperature 10.0 10 > th dose dependent rect. 15 17
454 54.60 radiation 20.0 270 < th dose dependent rect. 16 11
470 54.63 atmosphere 1000.0 30 > th dose independent rect. 19 9
475 54.64 temperature 15.0 14400 < th dose independent rect. 5 7
478 54.64 radiation 1.0 270 < th dose dependent rect. 12 15
500 54.67 temperature 15.0 10 > th dose dependent rect. 8 7
523 54.71 temperature 15.0 14400 < th dose dependent sin 5 NA
584 54.77 radiation 20.0 90 < th dose independent rect. 21 22
616 54.80 temperature 15.0 14400 < th dose dependent rect. 20 12
668 54.83 humidity 50.0 30 > th dose dependent rect. 19 9
720 54.86 radiation 1.0 90 < th dose independent rect. 19 11
784 54.89 radiation 40.0 90 < th dose independent rect. 4 15
803 54.90 temperature 10.0 270 > th dose dependent rect. 6 7
827 54.91 humidity 70.0 14400 > th dose dependent rect. 6 1
864 54.93 temperature 10.0 720 > th dose dependent rect. 13 11
891 54.95 temperature 15.0 14400 < th dose dependent no NA NA
892 54.95 humidity 90.0 14400 < th dose dependent rect. 6 1
901 54.96 temperature 10.0 90 > th dose dependent rect. 23 9
904 54.97 humidity 70.0 30 > th dose independent rect. 19 9
917 54.98 radiation 1.0 90 < th dose dependent rect. 19 11
932 55.00 radiation 1.0 90 < th dose dependent sin 13 NA
942 55.01 temperature 15.0 14400 > th dose independent rect. 21 4
949 55.02 wind 5.0 270 < th dose independent rect. 21 10
971 55.03 radiation 1.0 270 < th dose dependent rect. 5 22
982 55.05 humidity 60.0 270 > th dose independent rect. 17 10
984 55.05 temperature 15.0 270 > th dose dependent rect. 7 4