Os05g0524200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dual specificity protein phosphatase domain containing protein.
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Os05g0524200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dual specificity protein phosphatase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.54 | 0.38 | 7.39 | 0.637 | 0.492 | 1.22 | -0.158 | -2.49 | -0.252 | 7.6 | 24.49 | 4020 | -- | -- |
| 66.38 | 0.379 | 7.42 | 0.396 | 0.535 | 1.45 | 0.0838 | -- | -0.226 | 7.64 | 21.5 | 5269 | -- | -- |
| 64.96 | 0.375 | 7.37 | 0.674 | 0.51 | 1.12 | -- | -2.25 | -0.21 | 7.51 | 24 | 4038 | -- | -- |
| 62.14 | 0.367 | 7.45 | 0.118 | 0.527 | 1.18 | -- | -- | -0.332 | 8.46 | 21.7 | 3159 | -- | -- |
| 76.34 | 0.407 | 7.37 | 0.622 | -- | 1.14 | -- | -2.11 | -0.137 | -- | 23.91 | 3487 | -- | -- |
| 103.57 | 0.477 | 7.55 | -0.54 | 0.532 | -- | -0.141 | -- | -0.76 | 8.58 | -- | -- | -- | -- |
| 103.63 | 0.477 | 7.55 | -0.544 | 0.532 | -- | -- | -- | -0.76 | 8.59 | -- | -- | -- | -- |
| 75.67 | 0.405 | 7.46 | 0.164 | -- | 1.25 | -- | -- | -0.318 | -- | 21.71 | 3543 | -- | -- |
| 62.34 | 0.368 | 7.46 | -- | 0.521 | 1.17 | -- | -- | -0.37 | 8.38 | 21.78 | 3159 | -- | -- |
| 119.56 | 0.511 | 7.56 | -0.543 | -- | -- | -- | -- | -0.755 | -- | -- | -- | -- | -- |
| 111.44 | 0.494 | 7.53 | -- | 0.53 | -- | -- | -- | -0.699 | 8.67 | -- | -- | -- | -- |
| 76.22 | 0.407 | 7.47 | -- | -- | 1.18 | -- | -- | -0.356 | -- | 21.74 | 3540 | -- | -- |
| 127.33 | 0.527 | 7.55 | -- | -- | -- | -- | -- | -0.695 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 2 |
| 18 | 62.60 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 32 | 62.77 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 44 | 62.87 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 87 | 63.15 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 137 | 63.49 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 9 |
| 188 | 63.75 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 196 | 63.81 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 324 | 64.30 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 382 | 64.53 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 421 | 64.64 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 424 | 64.66 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 497 | 64.87 | temperature | 20 | 4320 | > th | dose dependent | sin | 13 | NA |
| 630 | 65.23 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 11 |
| 639 | 65.25 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 676 | 65.30 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 10 |
| 679 | 65.31 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 13 |
| 971 | 65.91 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 17 |
| 981 | 65.93 | temperature | 25 | 4320 | > th | dose dependent | rect. | 11 | 3 |