Os05g0524100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0524100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 225.04 | 0.705 | 10.1 | -1.67 | 1.01 | 1.89 | 0.289 | -1.2 | 0.104 | 0.247 | 10.65 | 10 | -- | -- |
| 217.18 | 0.686 | 10.2 | -1.6 | 0.876 | 2.02 | -1.06 | -- | 0.0683 | 0.891 | 7.188 | 4 | -- | -- |
| 218.83 | 0.689 | 10.1 | -1.61 | 0.966 | 1.9 | -- | -0.773 | 0.11 | 0.603 | 7.19 | 6 | -- | -- |
| 221.16 | 0.693 | 10.1 | -1.62 | 0.931 | 1.93 | -- | -- | 0.123 | 0.754 | 6.916 | 4 | -- | -- |
| 227.95 | 0.703 | 10.1 | -1.62 | -- | 2.59 | -- | -0.954 | 0.149 | -- | 7.1 | 4 | -- | -- |
| 281.5 | 0.787 | 10.2 | -1.66 | 3.12 | -- | -0.867 | -- | 0.0483 | 24 | -- | -- | -- | -- |
| 284.74 | 0.79 | 10.2 | -1.63 | 3.12 | -- | -- | -- | 0.0526 | 24 | -- | -- | -- | -- |
| 233.49 | 0.712 | 10.1 | -1.6 | -- | 2.58 | -- | -- | 0.154 | -- | 7.111 | 4 | -- | -- |
| 286.74 | 0.789 | 10.1 | -- | 0.873 | 1.97 | -- | -- | 0.312 | 0.84 | 6.446 | 2 | -- | -- |
| 898.32 | 1.4 | 10.1 | -1.53 | -- | -- | -- | -- | 0.0952 | -- | -- | -- | -- | -- |
| 354.72 | 0.881 | 10.1 | -- | 3.1 | -- | -- | -- | 0.234 | 23.9 | -- | -- | -- | -- |
| 298.2 | 0.804 | 10.1 | -- | -- | 2.57 | -- | -- | 0.344 | -- | 6.49 | 2 | -- | -- |
| 960.36 | 1.45 | 10.1 | -- | -- | -- | -- | -- | 0.265 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 215.48 | radiation | 1.0 | 10 | < th | dose dependent | sin | 1 | NA |
| 2 | 216.28 | radiation | 1.0 | 10 | > th | dose independent | sin | 0 | NA |
| 4 | 216.50 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 6 | 23 |
| 5 | 217.43 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 2 | 18 |
| 6 | 217.84 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 8 | 21 |
| 7 | 218.25 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 18 |
| 9 | 219.87 | radiation | 1.0 | 10 | < th | dose independent | sin | 1 | NA |
| 28 | 224.49 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 30 | 224.60 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 8 | 12 |
| 32 | 224.73 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 11 |
| 46 | 225.65 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 48 | 225.70 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 12 | 17 |
| 49 | 225.75 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 50 | 225.80 | radiation | 10.0 | 10 | < th | dose dependent | no | NA | NA |
| 51 | 225.84 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 56 | 226.29 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 114 | 230.31 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 119 | 230.62 | radiation | 1.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 155 | 232.51 | radiation | 20.0 | 10 | < th | dose independent | rect. | 8 | 12 |
| 171 | 233.10 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 23 |
| 187 | 233.34 | radiation | 20.0 | 10 | < th | dose independent | rect. | 8 | 21 |
| 225 | 234.56 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 226 | 234.61 | radiation | 1.0 | 10 | < th | dose independent | rect. | 23 | 23 |
| 229 | 234.65 | radiation | 20.0 | 30 | < th | dose independent | rect. | 12 | 17 |
| 265 | 235.75 | radiation | 1.0 | 10 | > th | dose independent | no | NA | NA |
| 266 | 235.75 | radiation | 1.0 | 10 | < th | dose independent | no | NA | NA |
| 303 | 235.75 | radiation | 1.0 | 10 | < th | dose independent | rect. | 11 | 21 |
| 328 | 235.75 | radiation | 1.0 | 10 | < th | dose independent | rect. | 13 | 23 |
| 329 | 235.75 | radiation | 1.0 | 10 | < th | dose independent | rect. | 15 | 23 |
| 372 | 236.79 | radiation | 1.0 | 10 | < th | dose independent | rect. | 17 | 23 |
| 373 | 236.93 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 11 |
| 409 | 237.80 | radiation | 1.0 | 10 | < th | dose independent | rect. | 13 | 19 |
| 432 | 238.16 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 463 | 238.52 | radiation | 1.0 | 10 | < th | dose independent | rect. | 15 | 21 |
| 492 | 239.34 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 11 |
| 496 | 239.39 | wind | 1.0 | 90 | > th | dose independent | rect. | 1 | 19 |
| 499 | 239.41 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 11 |
| 508 | 239.55 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 509 | 239.57 | humidity | 60.0 | 270 | > th | dose independent | rect. | 23 | 11 |
| 537 | 239.76 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 11 |
| 538 | 239.76 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 13 |
| 540 | 239.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 11 |
| 541 | 239.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 11 |
| 552 | 240.03 | radiation | 20.0 | 10 | < th | dose independent | rect. | 1 | 19 |
| 586 | 240.43 | radiation | 1.0 | 10 | < th | dose independent | rect. | 15 | 17 |
| 605 | 240.49 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 13 |
| 607 | 240.49 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 13 |
| 609 | 240.53 | radiation | 10.0 | 720 | < th | dose independent | rect. | 20 | 10 |
| 695 | 240.94 | radiation | 1.0 | 10 | < th | dose independent | rect. | 11 | 9 |
| 724 | 241.32 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 11 |
| 738 | 241.63 | radiation | 1.0 | 10 | > th | dose independent | rect. | 7 | 23 |
| 795 | 242.50 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 11 |
| 797 | 242.50 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 11 |
| 798 | 242.50 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 13 |
| 805 | 242.62 | radiation | 1.0 | 10 | < th | dose independent | rect. | 13 | 7 |
| 838 | 243.02 | radiation | 40.0 | 270 | < th | dose independent | rect. | 23 | 11 |
| 840 | 243.05 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 11 |
| 841 | 243.05 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 11 |
| 883 | 243.43 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 11 |
| 886 | 243.43 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 11 |
| 899 | 243.61 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 13 |
| 913 | 243.74 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 2 | 12 |
| 933 | 243.84 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 11 |
| 935 | 243.84 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 11 |
| 936 | 243.84 | temperature | 10.0 | 10 | > th | dose independent | rect. | 16 | 13 |
| 949 | 243.98 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 10 |
| 951 | 244.01 | temperature | 15.0 | 720 | > th | dose independent | rect. | 6 | 5 |
| 967 | 244.12 | radiation | 20.0 | 720 | < th | dose dependent | rect. | 20 | 10 |
| 974 | 244.22 | wind | 9.0 | 10 | < th | dose independent | rect. | 16 | 13 |