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Os05g0520600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.0218) R2 : 0.185
β1 : -0.766 (0.0798) R2dD : 0.171 R2D : 0.179
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0679 (0.0465) R2dN8 : 0.0051 R2N8 : 0.0138
σ : 0.409
deviance : 76.69
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
55.27 0.349 12.2 -0.801 0.481 0.77 0.091 0.12 0.0411 10.6 224.3 1267 -- --
55.29 0.346 12.2 -0.811 0.484 0.785 0.0777 -- 0.04 10.6 6840 1262 -- --
55.31 0.346 12.2 -0.8 0.479 0.769 -- 0.0902 0.0407 10.6 239 1268 -- --
55.32 0.346 12.2 -0.81 0.483 0.78 -- -- 0.0396 10.6 6997 1262 -- --
65.73 0.378 12.2 -0.811 -- 0.666 -- 0.00305 0.0443 -- 275.1 1460 -- --
67.35 0.385 12.2 -0.762 0.397 -- -0.00247 -- 0.0673 9.7 -- -- -- --
67.35 0.384 12.2 -0.762 0.397 -- -- -- 0.0673 9.7 -- -- -- --
65.72 0.378 12.2 -0.805 -- 0.66 -- -- 0.0408 -- 289.4 1456 -- --
72.53 0.397 12.1 -- 0.478 0.741 -- -- 0.132 10.7 23620 1266 -- --
76.69 0.409 12.2 -0.766 -- -- -- -- 0.0679 -- -- -- -- --
82.67 0.425 12.1 -- 0.399 -- -- -- 0.152 9.84 -- -- -- --
82.65 0.423 12.2 -- -- 0.603 -- -- 0.132 -- 294.6 1493 -- --
92.17 0.448 12.2 -- -- -- -- -- 0.153 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 50.35 wind 7.0 90 < th dose dependent rect. 3 6
4 50.68 radiation 1.0 270 < th dose dependent rect. 5 21
5 50.70 humidity 50.0 270 > th dose dependent rect. 18 8
6 50.87 precipitation 0.1 270 < th dose independent rect. 3 2
7 50.87 precipitation 0.1 270 < th dose dependent rect. 3 2
10 51.03 radiation 1.0 270 < th dose dependent rect. 14 12
11 51.08 precipitation 0.1 270 < th dose independent rect. 2 17
12 51.08 precipitation 0.1 270 < th dose dependent rect. 2 17
16 51.11 precipitation 0.1 90 < th dose independent rect. 3 6
17 51.11 precipitation 0.1 90 < th dose dependent rect. 3 6
19 51.13 humidity 70.0 270 > th dose independent rect. 18 8
21 51.18 precipitation 0.1 270 < th dose independent rect. 15 15
22 51.18 precipitation 0.1 270 < th dose dependent rect. 15 15
27 51.30 wind 5.0 10 < th dose dependent rect. 4 5
37 51.43 temperature 25.0 270 < th dose independent rect. 3 2
38 51.47 wind 3.0 90 < th dose independent rect. 3 6
39 51.49 precipitation 0.1 270 < th dose independent rect. 1 6
40 51.49 precipitation 0.1 270 < th dose dependent rect. 1 6
48 51.68 humidity 90.0 720 < th dose dependent rect. 18 3
51 51.71 wind 7.0 270 < th dose independent rect. 2 17
53 51.74 radiation 1.0 270 < th dose independent rect. 6 20
58 51.78 radiation 1.0 270 < th dose independent rect. 14 12
61 51.84 radiation 40.0 270 < th dose independent rect. 15 15
62 51.85 temperature 25.0 270 < th dose independent rect. 2 4
65 51.86 radiation 40.0 90 < th dose independent rect. 3 6
70 51.89 humidity 60.0 90 > th dose independent rect. 3 6
72 51.90 temperature 10.0 90 > th dose independent rect. 3 6
75 51.90 atmosphere 995.0 90 > th dose independent rect. 3 6
76 51.90 atmosphere 1015.0 90 < th dose independent rect. 3 6
77 51.90 temperature 10.0 90 > th dose independent rect. 9 18
80 51.92 temperature 30.0 90 < th dose independent rect. 3 6
81 51.92 temperature 10.0 270 > th dose independent rect. 6 9
82 51.92 atmosphere 1015.0 270 < th dose independent rect. 6 9
83 51.92 temperature 10.0 270 > th dose independent rect. 15 15
85 51.93 wind 9.0 270 < th dose independent rect. 15 15
87 51.94 radiation 20.0 90 < th dose independent rect. 3 6
89 51.95 wind 5.0 270 < th dose independent rect. 3 2
91 51.97 precipitation 0.1 270 < th dose independent rect. 2 4
92 51.97 precipitation 0.1 270 < th dose dependent rect. 2 4
93 51.98 temperature 30.0 270 < th dose independent rect. 18 8
96 52.00 precipitation 0.1 270 < th dose independent rect. 6 9
97 52.00 precipitation 0.1 270 < th dose dependent rect. 6 9
104 52.07 wind 9.0 270 < th dose independent rect. 19 7
108 52.07 wind 9.0 270 < th dose dependent rect. 3 2
109 52.08 temperature 10.0 270 > th dose independent rect. 19 7
112 52.08 atmosphere 995.0 270 > th dose independent rect. 19 7
113 52.08 radiation 1.0 270 < th dose independent rect. 19 7
118 52.08 temperature 10.0 270 > th dose independent rect. 2 17
119 52.08 atmosphere 1015.0 270 < th dose independent rect. 2 17
121 52.08 radiation 1.0 270 < th dose dependent rect. 19 7
128 52.13 temperature 10.0 270 > th dose independent rect. 3 2
131 52.13 humidity 50.0 270 > th dose independent rect. 3 2
134 52.13 atmosphere 995.0 270 > th dose independent rect. 3 2
135 52.13 atmosphere 1010.0 270 < th dose independent rect. 3 2
137 52.13 radiation 20.0 270 < th dose independent rect. 3 2
141 52.13 temperature 10.0 270 > th dose independent rect. 5 22
143 52.14 radiation 20.0 270 < th dose dependent rect. 3 2
147 52.15 radiation 1.0 270 < th dose independent rect. 3 2
152 52.16 wind 5.0 270 < th dose independent rect. 1 6
157 52.19 wind 9.0 90 < th dose independent rect. 9 18
160 52.22 humidity 50.0 270 > th dose dependent rect. 3 2
164 52.24 wind 9.0 270 < th dose independent rect. 6 9
168 52.25 humidity 50.0 270 > th dose independent rect. 7 18
171 52.26 humidity 80.0 720 < th dose dependent rect. 17 11
178 52.28 humidity 50.0 90 > th dose dependent rect. 3 6
181 52.28 humidity 80.0 720 < th dose dependent rect. 17 15
185 52.30 radiation 40.0 10 < th dose dependent rect. 4 18
189 52.31 radiation 40.0 90 < th dose dependent rect. 3 6
192 52.32 temperature 10.0 270 > th dose independent rect. 1 6
195 52.32 humidity 50.0 270 > th dose independent rect. 1 6
198 52.32 atmosphere 995.0 270 > th dose independent rect. 1 6
199 52.32 atmosphere 1015.0 270 < th dose independent rect. 1 6
200 52.32 radiation 20.0 270 < th dose independent rect. 1 6
203 52.32 temperature 10.0 270 > th dose independent rect. 7 18
206 52.34 precipitation 0.1 270 < th dose independent rect. 19 7
207 52.34 precipitation 0.1 270 < th dose dependent rect. 19 7
213 52.36 temperature 10.0 270 > th dose dependent rect. 3 2
214 52.37 atmosphere 995.0 270 > th dose independent rect. 6 9
222 52.40 precipitation 0.1 90 < th dose independent rect. 9 18
224 52.40 precipitation 0.1 90 < th dose dependent rect. 9 18
225 52.41 radiation 40.0 270 < th dose dependent rect. 1 6
233 52.44 wind 9.0 270 < th dose dependent rect. 1 6
261 52.58 humidity 50.0 270 > th dose independent rect. 6 20
271 52.63 humidity 50.0 10 > th dose dependent rect. 20 8
274 52.65 wind 5.0 90 < th dose independent rect. 21 6
279 52.67 wind 9.0 270 < th dose independent rect. 7 18
299 52.73 atmosphere 995.0 270 > th dose independent rect. 2 17
312 52.76 precipitation 0.1 270 < th dose independent rect. 7 18
313 52.76 precipitation 0.1 270 < th dose dependent rect. 7 18
321 52.80 precipitation 0.1 90 < th dose independent rect. 21 6
323 52.80 precipitation 0.1 90 < th dose dependent rect. 21 6
332 52.83 temperature 10.0 270 > th dose independent rect. 2 4
335 52.83 humidity 50.0 270 > th dose independent rect. 2 4
338 52.83 atmosphere 995.0 270 > th dose independent rect. 2 4
339 52.83 atmosphere 1015.0 270 < th dose independent rect. 2 4
340 52.83 radiation 20.0 270 < th dose independent rect. 2 4
343 52.83 temperature 10.0 270 > th dose independent rect. 6 20
350 52.85 wind 9.0 270 < th dose independent rect. 5 22
352 52.85 wind 9.0 90 < th dose dependent rect. 21 6
353 52.86 temperature 10.0 90 > th dose independent rect. 21 6
354 52.86 temperature 30.0 90 < th dose independent rect. 21 6
355 52.86 humidity 50.0 90 > th dose independent rect. 21 6
358 52.86 atmosphere 995.0 90 > th dose independent rect. 21 6
359 52.86 radiation 1.0 90 < th dose independent rect. 21 6
366 52.86 radiation 1.0 90 < th dose dependent rect. 21 6
387 52.89 precipitation 0.1 10 < th dose independent rect. 4 5
389 52.89 radiation 40.0 270 < th dose dependent rect. 2 4
390 52.89 precipitation 0.1 10 < th dose dependent rect. 4 5
396 52.90 temperature 10.0 90 > th dose dependent rect. 3 6
418 52.97 radiation 10.0 10 < th dose independent rect. 4 18
422 52.98 temperature 10.0 270 > th dose dependent rect. 1 6
428 52.99 humidity 50.0 270 > th dose dependent rect. 1 6
435 53.01 atmosphere 995.0 270 > th dose independent rect. 15 15
438 53.02 precipitation 0.1 10 < th dose independent rect. 4 17
441 53.02 precipitation 0.1 10 < th dose dependent rect. 4 17
466 53.10 temperature 10.0 10 > th dose independent rect. 4 5
468 53.10 temperature 30.0 10 < th dose independent rect. 4 5
469 53.10 humidity 50.0 10 > th dose independent rect. 4 5
471 53.10 atmosphere 995.0 10 > th dose independent rect. 4 5
472 53.10 atmosphere 1015.0 10 < th dose independent rect. 4 5
476 53.10 temperature 10.0 10 > th dose independent rect. 9 19
480 53.12 humidity 80.0 720 < th dose independent rect. 18 3
481 53.12 wind 9.0 30 < th dose dependent rect. 20 8
490 53.14 radiation 40.0 10 < th dose independent rect. 4 5
493 53.14 humidity 50.0 270 > th dose dependent rect. 2 4
546 53.21 wind 9.0 270 < th dose independent rect. 6 20
569 53.24 humidity 80.0 720 < th dose independent rect. 19 1
578 53.24 radiation 40.0 90 < th dose dependent rect. 3 18
618 53.29 humidity 90.0 270 > th dose independent rect. 3 2
652 53.34 precipitation 0.1 270 < th dose independent rect. 6 20
659 53.34 precipitation 0.1 270 < th dose dependent rect. 6 20
665 53.36 radiation 40.0 10 < th dose dependent rect. 4 5
759 53.42 radiation 40.0 90 < th dose independent rect. 3 18
810 53.47 wind 1.0 270 > th dose independent rect. 6 8
818 53.49 wind 9.0 10 < th dose independent rect. 9 19
845 53.52 atmosphere 995.0 270 > th dose dependent rect. 3 2
856 53.54 precipitation 0.1 270 < th dose independent rect. 5 22
858 53.54 precipitation 0.1 270 < th dose dependent rect. 5 22
925 53.61 temperature 10.0 10 > th dose dependent rect. 4 5
958 53.68 atmosphere 995.0 10 > th dose dependent rect. 4 5