Os05g0518800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF584 family protein.
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Os05g0518800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF584 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 349.85 | 0.879 | 3.02 | -0.107 | 0.191 | 0.529 | 0.388 | 2.59 | 0.0892 | 9.17 | 1010 | 3719 | -- | -- |
| 364.01 | 0.889 | 2.98 | 0.357 | 0.135 | 0.77 | 0.519 | -- | 0.171 | 10.4 | 1013 | 3028 | -- | -- |
| 350.17 | 0.872 | 3.01 | -0.0892 | 0.205 | 0.536 | -- | 2.58 | 0.0916 | 8.03 | 1010 | 3712 | -- | -- |
| 364.17 | 0.889 | 2.97 | 0.379 | 0.2 | 0.772 | -- | -- | 0.171 | 8.1 | 1013 | 3011 | -- | -- |
| 352.47 | 0.874 | 3.02 | -0.0909 | -- | 0.523 | -- | 2.57 | 0.0898 | -- | 1010 | 3717 | -- | -- |
| 371.73 | 0.904 | 2.99 | 0.318 | 0.152 | -- | 0.477 | -- | 0.126 | 10.7 | -- | -- | -- | -- |
| 372.06 | 0.903 | 2.98 | 0.333 | 0.189 | -- | -- | -- | 0.125 | 8.37 | -- | -- | -- | -- |
| 366.36 | 0.891 | 2.98 | 0.38 | -- | 0.78 | -- | -- | 0.182 | -- | 1013 | 3095 | -- | -- |
| 367.83 | 0.893 | 2.98 | -- | 0.208 | 0.762 | -- | -- | 0.13 | 8.01 | 1013 | 3124 | -- | -- |
| 374.04 | 0.904 | 2.99 | 0.334 | -- | -- | -- | -- | 0.127 | -- | -- | -- | -- | -- |
| 374.98 | 0.906 | 2.99 | -- | 0.19 | -- | -- | -- | 0.0875 | 8.24 | -- | -- | -- | -- |
| 370.02 | 0.896 | 2.99 | -- | -- | 0.743 | -- | -- | 0.137 | -- | 1014 | 3149 | -- | -- |
| 376.99 | 0.906 | 3 | -- | -- | -- | -- | -- | 0.0895 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 339.73 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 19 | 3 |
| 3 | 339.73 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 19 | 3 |
| 5 | 339.83 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 19 | 2 |
| 7 | 339.83 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 19 | 2 |
| 149 | 343.58 | precipitation | 0.1 | 10 | > th | dose independent | sin | 19 | NA |
| 150 | 343.61 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 19 | NA |
| 231 | 345.47 | precipitation | 0.1 | 30 | < th | dose independent | sin | 16 | NA |
| 232 | 345.47 | precipitation | 0.1 | 30 | < th | dose dependent | sin | 16 | NA |
| 240 | 345.54 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 267 | 345.87 | wind | 7.0 | 30 | > th | dose independent | rect. | 19 | 3 |
| 374 | 347.34 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 375 | 347.34 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 385 | 347.76 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 444 | 348.40 | precipitation | 0.1 | 10 | < th | dose independent | sin | 21 | NA |
| 445 | 348.40 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 21 | NA |
| 448 | 348.45 | humidity | 60.0 | 90 | < th | dose independent | rect. | 9 | 1 |
| 467 | 348.50 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 472 | 348.76 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 479 | 349.01 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 17 | 19 |
| 480 | 349.05 | humidity | 50.0 | 4320 | < th | dose independent | sin | 9 | NA |
| 481 | 349.07 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 17 | 19 |
| 507 | 349.18 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 530 | 349.30 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 16 | 21 |
| 533 | 349.34 | humidity | 50.0 | 4320 | < th | dose dependent | sin | 10 | NA |
| 534 | 349.35 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 16 | 21 |
| 556 | 349.74 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 17 | 19 |
| 575 | 350.01 | humidity | 50.0 | 4320 | > th | dose independent | sin | 10 | NA |
| 576 | 350.02 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 596 | 350.35 | wind | 7.0 | 30 | > th | dose dependent | rect. | 19 | 3 |
| 659 | 350.63 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 668 | 350.81 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 19 | 14 |
| 673 | 350.84 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 11 |
| 677 | 350.86 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 20 | 12 |
| 714 | 351.14 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 21 | 11 |
| 715 | 351.17 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 23 | 13 |
| 732 | 351.23 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 21 | 15 |
| 753 | 351.29 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 5 | 7 |
| 754 | 351.29 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 3 | 8 |
| 759 | 351.31 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 5 | 8 |
| 762 | 351.33 | atmosphere | 1010.0 | 4320 | > th | dose independent | rect. | 13 | 2 |
| 771 | 351.37 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 2 | 10 |
| 775 | 351.39 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 13 | 3 |
| 812 | 351.50 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 4 | 10 |
| 818 | 351.52 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 845 | 351.56 | atmosphere | 1010.0 | 4320 | > th | dose dependent | sin | 3 | NA |
| 863 | 351.61 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 867 | 351.61 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 22 | 16 |
| 872 | 351.63 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 6 | 18 |
| 911 | 351.68 | atmosphere | 1010.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 939 | 351.69 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 9 | 12 |
| 950 | 351.70 | atmosphere | 1010.0 | 4320 | > th | dose dependent | sin | 21 | NA |