Os05g0515200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0515200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cytochrome P450 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 163.73 | 0.601 | 9.84 | -1.31 | 1.78 | 1.28 | 1.17 | 5.77 | -0.215 | 5.06 | 0.04207 | 4326 | 12 | 4.95 |
| 178.89 | 0.623 | 9.79 | -1.46 | 1.69 | 1.28 | 1.25 | -- | -0.207 | 5.27 | 1.488 | 4316 | 12.1 | 4.85 |
| 167.17 | 0.602 | 9.84 | -1.3 | 1.78 | 1.29 | -- | 5.78 | -0.213 | 4.97 | 0.2035 | 4326 | 12 | 4.95 |
| 181.14 | 0.627 | 9.79 | -1.47 | 1.67 | 1.29 | -- | -- | -0.235 | 5.18 | 1.537 | 4316 | 12.1 | 4.86 |
| 319.65 | 0.833 | 9.86 | -1.19 | -- | 1.25 | -- | 5.74 | -0.22 | -- | 0.1939 | 8619 | 12 | 4.95 |
| 214.5 | 0.687 | 9.79 | -1.68 | 1.74 | -- | 0.934 | -- | -0.149 | 5.18 | -- | -- | -- | -- |
| 216.6 | 0.689 | 9.79 | -1.68 | 1.75 | -- | -- | -- | -0.154 | 5.09 | -- | -- | -- | -- |
| 295.02 | 0.8 | 9.79 | -1.56 | -- | 2.06 | -- | -- | -0.251 | -- | 3.034 | 4310 | 12.1 | 4.8 |
| 236.95 | 0.717 | 9.79 | -- | 1.67 | 1.6 | -- | -- | -0.0845 | 5.18 | 1.537 | 4316 | 12.1 | 4.86 |
| 376.97 | 0.907 | 9.81 | -1.62 | -- | -- | -- | -- | -0.11 | -- | -- | -- | -- | -- |
| 291.11 | 0.798 | 9.75 | -- | 1.72 | -- | -- | -- | 0.0333 | 5.13 | -- | -- | -- | -- |
| 347.18 | 0.868 | 9.81 | -- | -- | 2.38 | -- | -- | -0.0972 | -- | 2.718 | 4311 | 12.1 | 4.82 |
| 446.1 | 0.986 | 9.77 | -- | -- | -- | -- | -- | 0.0701 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 161.17 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 161.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 3 | 162.21 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 4 | 162.63 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 5 | 162.63 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 7 | 163.96 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 12 | 164.18 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 9 |
| 17 | 164.64 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 18 | 164.64 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 21 | 164.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 22 | 164.77 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 23 | 164.78 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 24 | 164.78 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 26 | 164.82 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 5 |
| 27 | 164.82 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 5 |
| 31 | 165.20 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 32 | 165.22 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 39 | 165.56 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 42 | 165.67 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 61 | 166.22 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 11 |
| 62 | 166.22 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 11 |
| 72 | 166.41 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 74 | 166.44 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 14 | 3 |
| 128 | 167.63 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 130 | 167.74 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 138 | 167.94 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 181 | 168.61 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 12 |
| 187 | 168.66 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 195 | 168.78 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 8 |
| 208 | 168.96 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 9 |
| 221 | 169.17 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 12 |
| 226 | 169.27 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 2 |
| 242 | 169.47 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 5 |
| 289 | 169.90 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 336 | 170.43 | wind | 3.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 346 | 170.53 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 377 | 170.75 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 406 | 170.99 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 420 | 171.15 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 456 | 171.44 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 13 |
| 461 | 171.44 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 13 |
| 469 | 171.52 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 471 | 171.52 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 479 | 171.54 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 483 | 171.57 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 484 | 171.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 13 |
| 487 | 171.57 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 499 | 171.63 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 22 | 17 |
| 507 | 171.68 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 524 | 171.78 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 534 | 171.85 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 561 | 171.99 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 564 | 172.00 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 575 | 172.06 | wind | 3.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 665 | 172.52 | wind | 1.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 684 | 172.66 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 689 | 172.69 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 692 | 172.69 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 694 | 172.70 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 696 | 172.71 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 701 | 172.75 | wind | 3.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 713 | 172.82 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 747 | 173.07 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 8 |
| 749 | 173.07 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 8 |
| 754 | 173.15 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 763 | 173.21 | wind | 1.0 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 803 | 173.44 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 12 |
| 836 | 173.59 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 872 | 173.80 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 891 | 173.86 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 919 | 174.02 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 934 | 174.11 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 12 |
| 937 | 174.14 | wind | 1.0 | 14400 | > th | dose dependent | sin | 9 | NA |
| 943 | 174.19 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 982 | 174.42 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 0 | NA |
| 983 | 174.42 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 0 | NA |
| 998 | 174.49 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |