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Os05g0508400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Jacalin-related lectin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0418) R2 : 0.682
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.84 (0.105) R2dC : 0.525 R2C : 0.583
β3 : -2.5 (0.236) R2dE : 0.0868 R2E : 0.139
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.458 (0.0892) R2dN8 : 0.0279 R2N8 : 0.00138
σ : 0.78
deviance : 280.53
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C
peak time of C : 9.03
E
wheather : humidity
threshold : 73.1
memory length : 1144
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 11.5
open length of G : 1.8

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
271.42 0.774 11.3 0.458 2.9 -3.32 0.117 -3.58 -0.432 9.04 76.01 1246 11.2 2.15
275.7 0.773 11.3 0.397 2.81 -2.48 0.315 -- -0.454 9.03 73.01 1143 11.5 1.8
270.21 0.766 11.3 0.521 2.93 -2.94 -- -3.11 -0.409 9.04 74.22 1293 11.3 1.97
276.1 0.774 11.3 0.418 2.83 -2.43 -- -- -0.438 9.02 72.94 1145 11.5 1.85
400.73 0.932 11.6 0.707 -- -3.63 -- -2.65 -0.395 -- 26.22 873 12.6 2.07
340.1 0.865 11.3 0.704 3.01 -- 0.0805 -- -0.222 9.09 -- -- -- --
340.12 0.864 11.3 0.706 3.01 -- -- -- -0.222 9.09 -- -- -- --
313.93 0.825 11.4 0.717 -- -3.47 -- -- -0.158 -- 6.253 796 11.4 6.35
280.53 0.78 11.4 -- 2.84 -2.5 -- -- -0.458 9.03 73.1 1144 11.5 1.8
861.74 1.37 11.4 0.7 -- -- -- -- -0.205 -- -- -- -- --
353.28 0.879 11.3 -- 3.01 -- -- -- -0.3 9.07 -- -- -- --
318.44 0.831 11.4 -- -- -3.6 -- -- -0.283 -- -0.6271 823 11.1 6.13
874.65 1.38 11.4 -- -- -- -- -- -0.282 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 279.25 humidity 80.0 1440 < th dose independent rect. 11 3
3 281.00 humidity 80.0 1440 > th dose independent rect. 11 3
6 284.12 precipitation 0.1 14400 > th dose dependent rect. 13 4
7 284.17 precipitation 0.1 14400 < th dose independent rect. 13 4
8 284.17 precipitation 0.1 14400 < th dose dependent rect. 13 4
9 284.28 precipitation 0.1 14400 > th dose independent rect. 13 4
22 286.09 wind 3.0 14400 < th dose dependent rect. 2 1
28 286.63 humidity 80.0 1440 > th dose dependent rect. 10 4
42 288.35 radiation 1.0 1440 < th dose dependent rect. 7 10
47 288.82 wind 1.0 14400 > th dose independent rect. 19 10
61 289.60 precipitation 0.1 14400 > th dose dependent rect. 19 1
64 289.85 wind 1.0 14400 < th dose independent rect. 19 10
66 290.11 wind 1.0 14400 < th dose independent rect. 1 4
77 291.06 precipitation 0.1 14400 > th dose independent rect. 19 1
85 291.63 wind 1.0 14400 > th dose independent rect. 1 5
87 291.67 wind 3.0 14400 < th dose dependent rect. 21 8
89 291.75 wind 3.0 14400 < th dose dependent rect. 23 5
90 291.77 precipitation 0.1 14400 < th dose independent rect. 19 1
91 291.77 precipitation 0.1 14400 < th dose dependent rect. 19 1
96 292.05 precipitation 0.1 14400 < th dose independent rect. 12 8
97 292.05 precipitation 0.1 14400 < th dose dependent rect. 12 8
98 292.19 wind 1.0 14400 > th dose independent rect. 1 2
99 292.22 precipitation 0.1 14400 > th dose independent rect. 12 8
138 293.33 radiation 1.0 1440 > th dose independent rect. 7 10
140 293.44 humidity 60.0 14400 > th dose independent rect. 16 1
141 293.53 radiation 1.0 1440 < th dose independent rect. 7 10
142 293.57 wind 1.0 43200 < th dose independent rect. 5 2
165 294.21 humidity 80.0 14400 > th dose independent rect. 13 2
200 295.02 precipitation 0.1 14400 > th dose dependent rect. 13 7
220 295.63 wind 1.0 14400 > th dose independent rect. 4 2
250 296.09 humidity 80.0 14400 < th dose independent rect. 13 2
265 296.26 atmosphere 1005.0 720 > th dose independent rect. 15 4
327 297.37 wind 1.0 14400 < th dose independent rect. 1 2
349 297.75 humidity 60.0 4320 > th dose dependent rect. 13 1
350 297.75 radiation 1.0 1440 < th dose dependent rect. 12 5
364 297.97 precipitation 0.1 1440 < th dose independent rect. 5 9
365 297.97 precipitation 0.1 1440 < th dose dependent rect. 5 9
366 297.99 humidity 60.0 14400 < th dose dependent rect. 15 1
374 298.12 humidity 90.0 720 > th dose dependent sin 20 NA
409 298.66 precipitation 0.1 1440 < th dose independent rect. 5 11
410 298.66 precipitation 0.1 1440 < th dose dependent rect. 5 11
412 298.70 precipitation 0.1 1440 > th dose independent rect. 5 9
413 298.71 humidity 90.0 720 > th dose dependent rect. 8 18
428 298.88 humidity 90.0 720 > th dose dependent rect. 9 12
436 298.97 precipitation 0.1 14400 < th dose independent sin 22 NA
438 298.97 precipitation 0.1 14400 < th dose dependent sin 22 NA
448 299.05 humidity 60.0 14400 < th dose independent rect. 16 1
449 299.08 wind 3.0 14400 < th dose independent rect. 23 2
450 299.09 precipitation 0.1 14400 > th dose independent sin 22 NA
464 299.18 humidity 90.0 720 > th dose dependent rect. 19 2
469 299.24 precipitation 0.1 1440 > th dose dependent rect. 4 12
474 299.28 precipitation 0.1 1440 > th dose dependent rect. 4 10
489 299.41 humidity 60.0 14400 > th dose independent rect. 15 18
521 299.76 humidity 60.0 14400 > th dose independent rect. 15 15
531 299.81 humidity 60.0 14400 > th dose independent rect. 15 11
541 299.98 humidity 60.0 14400 > th dose independent rect. 12 5
557 300.10 radiation 1.0 720 < th dose dependent rect. 22 21
565 300.22 precipitation 0.1 720 < th dose independent rect. 19 16
566 300.22 precipitation 0.1 720 < th dose dependent rect. 19 16
589 300.33 precipitation 0.1 4320 > th dose dependent rect. 18 23
600 300.45 precipitation 0.1 1440 < th dose independent rect. 7 7
601 300.45 precipitation 0.1 1440 < th dose dependent rect. 7 7
614 300.56 humidity 60.0 14400 < th dose independent rect. 12 5
624 300.61 humidity 60.0 14400 < th dose dependent rect. 14 6
641 300.63 humidity 70.0 14400 < th dose dependent rect. 12 5
647 300.68 humidity 60.0 14400 > th dose independent rect. 12 21
651 300.70 precipitation 0.1 720 > th dose dependent rect. 19 21
672 300.82 humidity 60.0 720 > th dose dependent rect. 7 20
674 300.83 precipitation 0.1 720 > th dose independent rect. 19 9
691 300.89 humidity 60.0 720 > th dose dependent rect. 22 21
692 300.89 humidity 70.0 14400 < th dose dependent rect. 12 21
717 301.03 humidity 60.0 14400 > th dose independent rect. 12 8
724 301.05 humidity 60.0 14400 > th dose independent rect. 12 18
733 301.07 humidity 60.0 14400 > th dose independent rect. 12 14
744 301.08 humidity 60.0 14400 < th dose independent rect. 12 21
772 301.18 humidity 60.0 14400 < th dose independent rect. 12 1
779 301.21 humidity 70.0 14400 < th dose dependent rect. 11 10
814 301.27 precipitation 0.1 4320 > th dose dependent rect. 2 15
816 301.28 humidity 60.0 14400 > th dose independent sin 16 NA
837 301.32 precipitation 0.1 720 > th dose independent rect. 18 23
841 301.33 wind 3.0 14400 > th dose independent rect. 22 3
844 301.34 humidity 60.0 14400 < th dose independent rect. 11 9
895 301.44 humidity 70.0 14400 < th dose dependent rect. 12 1
905 301.47 humidity 70.0 10 > th dose dependent rect. 7 23
911 301.50 precipitation 0.1 14400 > th dose dependent rect. 1 19
920 301.54 humidity 70.0 14400 < th dose dependent rect. 18 23
924 301.58 humidity 70.0 14400 < th dose dependent sin 19 NA
957 301.64 wind 1.0 14400 > th dose independent rect. 19 16
983 301.70 atmosphere 1005.0 720 > th dose independent rect. 16 1
985 301.70 humidity 90.0 14400 < th dose dependent rect. 14 1