Os05g0507400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0507400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.44 | 0.302 | 10.8 | -0.666 | 0.358 | 1.42 | 0.437 | -1.4 | 0.0177 | 5.3 | 9.87 | 1408 | -- | -- |
| 42.91 | 0.305 | 10.8 | -0.596 | 0.373 | 1.42 | 0.496 | -- | 0.0567 | 5.1 | 11.98 | 5686 | -- | -- |
| 41.88 | 0.301 | 10.8 | -0.658 | 0.361 | 1.43 | -- | -1.33 | 0.0144 | 5.42 | 9.781 | 1402 | -- | -- |
| 43.15 | 0.306 | 10.8 | -0.594 | 0.38 | 1.43 | -- | -- | 0.0526 | 5.57 | 9.935 | 5627 | -- | -- |
| 48.1 | 0.323 | 10.8 | -0.631 | -- | 1.49 | -- | -1.25 | 0.0215 | -- | 12.18 | 1312 | -- | -- |
| 76.72 | 0.411 | 10.7 | 0.0892 | 0.421 | -- | 0.444 | -- | 0.357 | 4.89 | -- | -- | -- | -- |
| 77.17 | 0.411 | 10.7 | 0.0884 | 0.426 | -- | -- | -- | 0.355 | 5.14 | -- | -- | -- | -- |
| 50.35 | 0.33 | 10.7 | -0.437 | -- | 1.33 | -- | -- | 0.0909 | -- | 13.25 | 2740 | -- | -- |
| 46.87 | 0.319 | 10.7 | -- | 0.475 | 0.985 | -- | -- | 0.157 | 6.4 | 20.42 | 2216 | -- | -- |
| 86.7 | 0.435 | 10.7 | 0.104 | -- | -- | -- | -- | 0.366 | -- | -- | -- | -- | -- |
| 77.38 | 0.411 | 10.7 | -- | 0.428 | -- | -- | -- | 0.345 | 5.13 | -- | -- | -- | -- |
| 52.48 | 0.337 | 10.7 | -- | -- | 1.41 | -- | -- | 0.15 | -- | 14.5 | 1292 | -- | -- |
| 86.98 | 0.435 | 10.7 | -- | -- | -- | -- | -- | 0.354 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.25 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 20 |
| 5 | 41.28 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 18 |
| 18 | 41.30 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 20 |
| 77 | 41.38 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 114 | 41.43 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 120 | 41.45 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 142 | 41.47 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 146 | 41.47 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 148 | 41.48 | temperature | 10 | 1440 | > th | dose dependent | sin | 17 | NA |
| 177 | 41.49 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 287 | 41.58 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 343 | 41.63 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 406 | 41.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 420 | 41.71 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 431 | 41.72 | temperature | 10 | 1440 | > th | dose dependent | sin | 1 | NA |
| 479 | 41.75 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 9 |
| 990 | 42.57 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |