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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0506600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.98 (0.0376) R2 : 0.0158
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.215 (0.0793) R2dN8 : 0.0205 R2N8 : 0.0158
σ : 0.709
deviance : 230.67
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
219.26 0.696 2.99 0.217 0.154 0.31 -0.0439 -2.37 -0.126 15.4 90.04 1436 -- --
227.51 0.703 2.97 -0.0465 0.108 0.343 -0.0209 -- -0.176 15.5 88.43 1317 -- --
219.26 0.69 2.99 0.216 0.154 0.309 -- -2.36 -0.126 15.5 90.04 1436 -- --
227.49 0.702 2.97 -0.0404 0.112 0.342 -- -- -0.174 16.1 88.01 1335 -- --
220.46 0.692 2.99 0.183 -- 0.401 -- -2.33 -0.145 -- 89.77 1348 -- --
229.45 0.71 2.98 0.00328 0.149 -- 0.0166 -- -0.211 15.9 -- -- -- --
229.45 0.709 2.98 0.00351 0.149 -- -- -- -0.211 15.8 -- -- -- --
228.11 0.703 2.97 -0.0519 -- 0.377 -- -- -0.173 -- 88.09 1299 -- --
227.53 0.703 2.97 -- 0.112 0.33 -- -- -0.171 16.3 88.03 1303 -- --
230.67 0.71 2.98 -0.00265 -- -- -- -- -0.215 -- -- -- -- --
229.45 0.709 2.98 -- 0.149 -- -- -- -0.211 15.8 -- -- -- --
228.17 0.704 2.97 -- -- 0.367 -- -- -0.168 -- 88.06 1299 -- --
230.67 0.709 2.98 -- -- -- -- -- -0.215 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 217.30 humidity 90 1440 < th dose independent rect. 15 2
2 217.38 humidity 90 1440 > th dose independent rect. 14 3
6 217.75 humidity 90 1440 > th dose dependent rect. 14 4
7 217.76 temperature 20 1440 < th dose dependent rect. 16 1
9 217.90 humidity 90 1440 > th dose dependent rect. 15 2
14 218.19 radiation 10 4320 > th dose dependent rect. 5 1
29 218.33 humidity 60 10 < th dose independent rect. 12 4
31 218.44 humidity 90 1440 > th dose independent sin 21 NA
38 218.56 humidity 90 1440 > th dose independent rect. 3 21
40 218.60 humidity 90 1440 < th dose independent rect. 3 21
48 218.73 humidity 90 1440 > th dose independent rect. 8 16
50 218.75 humidity 90 1440 > th dose independent rect. 8 22
61 218.81 humidity 90 1440 < th dose independent rect. 8 16
67 218.87 humidity 90 1440 < th dose independent sin 21 NA
85 219.00 humidity 90 1440 > th dose independent rect. 19 23
94 219.06 humidity 90 1440 > th dose independent rect. 21 21
99 219.09 humidity 90 1440 > th dose independent rect. 23 22
137 219.26 humidity 90 1440 > th dose independent no NA NA
145 219.30 humidity 90 1440 > th dose independent rect. 12 23
151 219.32 humidity 90 1440 < th dose independent rect. 8 22
168 219.36 humidity 90 1440 < th dose independent rect. 21 23
179 219.42 humidity 60 30 < th dose independent rect. 12 7
208 219.45 humidity 90 1440 > th dose independent rect. 15 23
247 219.54 humidity 90 1440 < th dose independent rect. 19 23
271 219.58 humidity 90 1440 < th dose independent no NA NA
275 219.58 radiation 20 720 > th dose dependent rect. 6 1
300 219.63 humidity 90 1440 < th dose independent rect. 12 23
318 219.64 humidity 90 1440 < th dose independent rect. 15 23
321 219.67 atmosphere 1005 10 < th dose independent rect. 5 1
413 219.94 radiation 10 4320 > th dose independent rect. 5 1
448 220.02 wind 3 30 < th dose independent rect. 12 7
455 220.04 temperature 15 10 > th dose independent rect. 6 23
473 220.11 humidity 70 1440 > th dose dependent rect. 16 19
479 220.13 wind 5 270 > th dose independent rect. 12 2
481 220.13 humidity 90 10 > th dose dependent rect. 6 1
499 220.17 humidity 90 1440 > th dose dependent sin 21 NA
550 220.31 humidity 80 1440 > th dose dependent rect. 3 21
560 220.34 temperature 15 4320 < th dose dependent rect. 3 18
654 220.60 humidity 80 1440 > th dose dependent rect. 7 23
669 220.63 humidity 80 1440 > th dose dependent rect. 7 17
692 220.68 wind 3 90 > th dose dependent rect. 12 23
699 220.70 wind 5 270 > th dose dependent rect. 12 2
702 220.70 humidity 80 1440 > th dose dependent rect. 21 23
703 220.71 radiation 20 720 > th dose independent rect. 6 1
758 220.76 humidity 80 1440 > th dose dependent rect. 19 23
760 220.77 humidity 80 1440 > th dose dependent no NA NA
775 220.80 humidity 90 1440 < th dose dependent rect. 16 19
814 220.87 humidity 50 1440 > th dose dependent rect. 16 14
829 220.90 humidity 90 1440 < th dose dependent rect. 16 17
852 220.95 humidity 80 1440 > th dose dependent rect. 10 23
907 221.07 wind 3 90 < th dose independent rect. 11 19
908 221.07 wind 1 4320 < th dose dependent rect. 2 2
919 221.09 humidity 60 10 > th dose independent sin 14 NA
947 221.14 wind 5 90 < th dose dependent rect. 12 6
948 221.15 humidity 90 10 > th dose independent rect. 6 1
983 221.21 wind 9 14400 > th dose dependent rect. 18 2