Os05g0506500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to GDSL-motif lipase/hydrolase-like protein.
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Os05g0506500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to GDSL-motif lipase/hydrolase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.98 | 0.412 | 3.27 | 0.103 | 0.28 | 0.147 | 0.88 | 0.808 | -0.0703 | 12.5 | 73 | 38 | -- | -- |
| 78.53 | 0.413 | 3.26 | 0.145 | 0.302 | 0.161 | 0.332 | -- | -0.0579 | 12.4 | 76.06 | 21 | -- | -- |
| 79.01 | 0.414 | 3.26 | 0.141 | 0.268 | 0.147 | -- | 0.305 | -0.0623 | 12.6 | 72.51 | 67 | -- | -- |
| 78.99 | 0.414 | 3.26 | 0.159 | 0.307 | 0.167 | -- | -- | -0.0559 | 12.6 | 76.12 | 21 | -- | -- |
| 81.75 | 0.421 | 3.26 | 0.116 | -- | 0.00162 | -- | 0.355 | -0.0618 | -- | 72 | 128 | -- | -- |
| 79.79 | 0.419 | 3.26 | 0.122 | 0.174 | -- | 0.379 | -- | -0.061 | 10.8 | -- | -- | -- | -- |
| 80.38 | 0.42 | 3.26 | 0.137 | 0.172 | -- | -- | -- | -0.0595 | 11 | -- | -- | -- | -- |
| 81.15 | 0.42 | 3.26 | 0.154 | -- | 0.175 | -- | -- | -0.0729 | -- | 62.32 | 805 | -- | -- |
| 79.65 | 0.416 | 3.26 | -- | 0.295 | 0.156 | -- | -- | -0.0736 | 12.5 | 76.09 | 21 | -- | -- |
| 82.23 | 0.424 | 3.26 | 0.133 | -- | -- | -- | -- | -0.0608 | -- | -- | -- | -- | -- |
| 80.88 | 0.421 | 3.26 | -- | 0.171 | -- | -- | -- | -0.0748 | 11 | -- | -- | -- | -- |
| 81.72 | 0.421 | 3.27 | -- | -- | 0.174 | -- | -- | -0.104 | -- | 58 | 755 | -- | -- |
| 82.7 | 0.424 | 3.27 | -- | -- | -- | -- | -- | -0.0756 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.15 | humidity | 80 | 30 | > th | dose independent | rect. | 11 | 1 |
| 2 | 69.17 | humidity | 70 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 71 | 74.39 | temperature | 25 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 87 | 74.87 | radiation | 20 | 90 | < th | dose independent | rect. | 10 | 1 |
| 89 | 74.89 | temperature | 25 | 720 | > th | dose independent | rect. | 4 | 1 |
| 97 | 75.09 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 11 | 1 |
| 165 | 75.82 | temperature | 30 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 166 | 75.82 | wind | 3 | 720 | > th | dose dependent | rect. | 24 | 9 |
| 199 | 75.97 | temperature | 30 | 10 | > th | dose dependent | rect. | 16 | 20 |
| 205 | 76.01 | temperature | 30 | 10 | > th | dose independent | rect. | 10 | 2 |
| 234 | 76.07 | temperature | 30 | 10 | > th | dose independent | rect. | 18 | 18 |
| 240 | 76.12 | temperature | 30 | 90 | > th | dose independent | rect. | 11 | 1 |
| 261 | 76.22 | wind | 5 | 720 | < th | dose independent | rect. | 23 | 10 |
| 262 | 76.22 | temperature | 30 | 10 | > th | dose dependent | sin | 7 | NA |
| 268 | 76.24 | humidity | 70 | 30 | > th | dose independent | rect. | 19 | 18 |
| 275 | 76.27 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 11 | 4 |
| 296 | 76.30 | radiation | 30 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 341 | 76.37 | humidity | 90 | 720 | < th | dose independent | rect. | 3 | 2 |
| 360 | 76.43 | temperature | 30 | 10 | > th | dose independent | rect. | 16 | 20 |
| 367 | 76.45 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 10 | 11 |
| 369 | 76.45 | temperature | 30 | 10 | > th | dose independent | rect. | 14 | 22 |
| 380 | 76.49 | wind | 5 | 720 | > th | dose independent | rect. | 23 | 10 |
| 406 | 76.51 | wind | 3 | 720 | > th | dose independent | rect. | 24 | 7 |
| 419 | 76.53 | wind | 9 | 720 | < th | dose dependent | rect. | 23 | 10 |
| 424 | 76.54 | wind | 5 | 720 | < th | dose independent | rect. | 21 | 14 |
| 470 | 76.59 | wind | 5 | 720 | < th | dose independent | rect. | 1 | 8 |
| 485 | 76.63 | humidity | 90 | 10 | < th | dose independent | rect. | 11 | 19 |
| 514 | 76.66 | wind | 3 | 720 | > th | dose dependent | sin | 8 | NA |
| 529 | 76.68 | humidity | 90 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 538 | 76.70 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 11 | 1 |
| 543 | 76.70 | wind | 5 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 556 | 76.72 | wind | 9 | 1440 | < th | dose dependent | rect. | 24 | 7 |
| 566 | 76.74 | humidity | 80 | 90 | > th | dose independent | rect. | 10 | 11 |
| 596 | 76.78 | humidity | 90 | 10 | < th | dose independent | rect. | 20 | 10 |
| 616 | 76.81 | wind | 3 | 720 | < th | dose independent | rect. | 5 | 5 |
| 660 | 76.83 | temperature | 30 | 10 | > th | dose dependent | rect. | 14 | 23 |
| 661 | 76.84 | wind | 3 | 720 | > th | dose independent | rect. | 5 | 1 |
| 699 | 76.88 | wind | 3 | 1440 | < th | dose independent | rect. | 24 | 1 |
| 708 | 76.88 | wind | 5 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 730 | 76.90 | temperature | 30 | 90 | > th | dose independent | sin | 8 | NA |
| 731 | 76.90 | wind | 3 | 270 | > th | dose independent | rect. | 8 | 1 |
| 736 | 76.90 | humidity | 70 | 10 | > th | dose independent | rect. | 11 | 15 |
| 743 | 76.90 | wind | 1 | 10 | > th | dose dependent | rect. | 1 | 14 |
| 750 | 76.91 | wind | 5 | 720 | < th | dose independent | rect. | 21 | 16 |
| 772 | 76.93 | wind | 3 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 779 | 76.94 | humidity | 70 | 10 | < th | dose independent | rect. | 15 | 22 |
| 781 | 76.94 | wind | 3 | 10 | > th | dose dependent | rect. | 11 | 4 |
| 783 | 76.95 | wind | 5 | 720 | < th | dose independent | sin | 8 | NA |
| 833 | 76.97 | wind | 1 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 861 | 76.98 | humidity | 70 | 10 | > th | dose independent | rect. | 11 | 21 |
| 862 | 76.98 | humidity | 70 | 10 | > th | dose independent | rect. | 16 | 21 |
| 870 | 76.99 | wind | 3 | 270 | > th | dose independent | rect. | 7 | 5 |
| 883 | 77.00 | wind | 3 | 720 | < th | dose independent | rect. | 8 | 1 |
| 888 | 77.00 | humidity | 70 | 10 | > th | dose independent | rect. | 11 | 19 |
| 916 | 77.02 | wind | 5 | 720 | > th | dose independent | sin | 8 | NA |
| 918 | 77.02 | wind | 3 | 1440 | > th | dose independent | rect. | 24 | 1 |