Os05g0503300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sulfite reductase (Fragment).
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Os05g0503300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Sulfite reductase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.79 | 0.229 | 13.6 | -0.229 | 0.144 | -0.362 | 0.59 | 1.09 | -0.375 | 22 | 1009 | 6808 | -- | -- |
| 25.89 | 0.237 | 13.7 | -0.262 | 0.0942 | -0.443 | 0.526 | -- | -0.341 | 22.2 | 1009 | 40626 | -- | -- |
| 24.71 | 0.232 | 13.6 | -0.193 | 0.167 | -0.366 | -- | 1.21 | -0.348 | 20.4 | 1008 | 8983 | -- | -- |
| 26.17 | 0.238 | 13.7 | -0.311 | 0.141 | -0.511 | -- | -- | -0.312 | 19.6 | 1007 | 40116 | -- | -- |
| 25.22 | 0.234 | 13.6 | -0.064 | -- | -0.464 | -- | 1.52 | -0.289 | -- | 1009 | 22894 | -- | -- |
| 31.01 | 0.261 | 13.7 | -0.6 | 0.155 | -- | 0.512 | -- | -0.434 | 21.8 | -- | -- | -- | -- |
| 31.77 | 0.264 | 13.7 | -0.617 | 0.171 | -- | -- | -- | -0.433 | 20.2 | -- | -- | -- | -- |
| 27.67 | 0.245 | 13.7 | -0.32 | -- | -0.511 | -- | -- | -0.308 | -- | 1007 | 40595 | -- | -- |
| 27.75 | 0.245 | 13.6 | -- | 0.186 | -0.656 | -- | -- | -0.227 | 20.6 | 1007 | 40829 | -- | -- |
| 33.39 | 0.27 | 13.7 | -0.618 | -- | -- | -- | -- | -0.435 | -- | -- | -- | -- | -- |
| 41.81 | 0.302 | 13.7 | -- | 0.175 | -- | -- | -- | -0.364 | 20 | -- | -- | -- | -- |
| 29.04 | 0.251 | 13.6 | -- | -- | -0.665 | -- | -- | -0.247 | -- | 1009 | 40582 | -- | -- |
| 43.47 | 0.308 | 13.7 | -- | -- | -- | -- | -- | -0.366 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.46 | radiation | 20 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 4 | 21.76 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 5 | 21.85 | radiation | 20 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 9 | 21.94 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 10 | 21.95 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 14 | 21.97 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 16 | 22.03 | wind | 1 | 43200 | > th | dose dependent | rect. | 12 | 4 |
| 21 | 22.05 | wind | 9 | 43200 | < th | dose dependent | rect. | 12 | 4 |
| 24 | 22.08 | wind | 9 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 29 | 22.11 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 35 | 22.13 | wind | 3 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 41 | 22.14 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 42 | 22.14 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 47 | 22.15 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 54 | 22.18 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 63 | 22.20 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 76 | 22.23 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 95 | 22.25 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 100 | 22.26 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 128 | 22.31 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 14 |
| 129 | 22.31 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 138 | 22.32 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 144 | 22.32 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 18 |
| 145 | 22.33 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 167 | 22.36 | wind | 9 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 224 | 22.43 | humidity | 80 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 287 | 22.48 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 292 | 22.48 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 20 |
| 315 | 22.51 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 330 | 22.52 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 15 |
| 362 | 22.56 | wind | 7 | 43200 | < th | dose dependent | sin | 21 | NA |
| 387 | 22.58 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 433 | 22.61 | wind | 1 | 43200 | > th | dose dependent | sin | 21 | NA |
| 453 | 22.62 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 15 |
| 456 | 22.63 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 479 | 22.64 | humidity | 80 | 43200 | < th | dose independent | sin | 10 | NA |
| 580 | 22.70 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 582 | 22.70 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 585 | 22.70 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 602 | 22.71 | radiation | 40 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 610 | 22.71 | radiation | 40 | 14400 | < th | dose independent | rect. | 15 | 12 |
| 622 | 22.72 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 636 | 22.73 | radiation | 40 | 14400 | < th | dose independent | rect. | 15 | 10 |
| 646 | 22.74 | radiation | 40 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 670 | 22.75 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 13 |
| 702 | 22.77 | humidity | 80 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 715 | 22.78 | radiation | 10 | 14400 | < th | dose independent | rect. | 22 | 7 |
| 729 | 22.79 | humidity | 80 | 43200 | > th | dose independent | sin | 11 | NA |
| 748 | 22.80 | radiation | 20 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 764 | 22.80 | radiation | 40 | 14400 | < th | dose independent | rect. | 15 | 15 |
| 858 | 22.85 | wind | 3 | 43200 | > th | dose independent | sin | 23 | NA |
| 861 | 22.85 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 14 |
| 926 | 22.88 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 962 | 22.90 | humidity | 50 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 995 | 22.91 | humidity | 80 | 43200 | < th | dose dependent | sin | 9 | NA |
| 996 | 22.91 | humidity | 80 | 43200 | < th | dose dependent | rect. | 10 | 1 |