Os05g0498200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Eggshell protein family protein.
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Os05g0498200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Eggshell protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 249.08 | 0.742 | 3.03 | -0.32 | 0.161 | -0.613 | -0.319 | -2.4 | -0.118 | 5.65 | 20.5 | 3149 | -- | -- |
| 251.96 | 0.739 | 2.91 | 0.126 | 0.201 | -0.417 | -0.28 | -- | 0.0734 | 5.58 | 24.1 | 1365 | -- | -- |
| 249.13 | 0.735 | 3.03 | -0.324 | 0.164 | -0.613 | -- | -2.4 | -0.114 | 4.36 | 20.5 | 3150 | -- | -- |
| 251.71 | 0.739 | 2.91 | 0.134 | 0.221 | -0.418 | -- | -- | 0.0768 | 4.07 | 24.12 | 1315 | -- | -- |
| 250.64 | 0.737 | 3.03 | -0.323 | -- | -0.605 | -- | -2.4 | -0.115 | -- | 20.5 | 3150 | -- | -- |
| 258.8 | 0.754 | 2.95 | -0.025 | 0.162 | -- | -0.333 | -- | -0.0828 | 5.83 | -- | -- | -- | -- |
| 258.85 | 0.753 | 2.95 | -0.0291 | 0.17 | -- | -- | -- | -0.0822 | 4.47 | -- | -- | -- | -- |
| 253.62 | 0.742 | 2.91 | 0.128 | -- | -0.432 | -- | -- | 0.098 | -- | 24 | 1740 | -- | -- |
| 252.15 | 0.74 | 2.92 | -- | 0.216 | -0.39 | -- | -- | 0.0653 | 4.05 | 24.1 | 1315 | -- | -- |
| 260.4 | 0.754 | 2.95 | -0.0224 | -- | -- | -- | -- | -0.0777 | -- | -- | -- | -- | -- |
| 258.87 | 0.753 | 2.95 | -- | 0.17 | -- | -- | -- | -0.079 | 4.47 | -- | -- | -- | -- |
| 254.08 | 0.742 | 2.92 | -- | -- | -0.368 | -- | -- | 0.0554 | -- | 24 | 1740 | -- | -- |
| 260.42 | 0.753 | 2.95 | -- | -- | -- | -- | -- | -0.0752 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 239.48 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 1 | 1 |
| 3 | 239.85 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 4 | 240.79 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 2 | 3 |
| 10 | 241.81 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 24 | 3 |
| 14 | 242.91 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 16 | 243.08 | wind | 1.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 17 | 243.30 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 26 | 243.83 | temperature | 20.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 28 | 243.83 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 35 | 244.12 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 52 | 244.41 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 58 | 244.59 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 1 |
| 59 | 244.59 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 61 | 244.70 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 64 | 244.71 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 23 | 17 |
| 65 | 244.71 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 22 |
| 73 | 244.76 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 3 | 12 |
| 78 | 244.86 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 79 | 244.87 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 81 | 244.88 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 4 | NA |
| 82 | 244.91 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 21 | 18 |
| 105 | 245.05 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 110 | 245.10 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 18 | 19 |
| 117 | 245.14 | wind | 1.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 120 | 245.19 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 14 | NA |
| 128 | 245.26 | atmosphere | 995.0 | 14400 | < th | dose dependent | no | NA | NA |
| 129 | 245.26 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 16 |
| 217 | 245.43 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 220 | 245.44 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 20 | 19 |
| 236 | 245.52 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 270 | 245.71 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 276 | 245.79 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 14 | 10 |
| 290 | 245.88 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 8 | 2 |
| 302 | 245.93 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 303 | 245.93 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 322 | 246.01 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 21 | 8 |
| 323 | 246.01 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 328 | 246.03 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 8 | 2 |
| 346 | 246.11 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 348 | 246.12 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 349 | 246.12 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 21 | 8 |
| 350 | 246.12 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 353 | 246.13 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 373 | 246.17 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 374 | 246.17 | wind | 5.0 | 30 | > th | dose dependent | rect. | 24 | 8 |
| 382 | 246.20 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 18 | 8 |
| 388 | 246.21 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 390 | 246.21 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 2 | 3 |
| 396 | 246.22 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 398 | 246.22 | wind | 1.0 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 412 | 246.26 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 413 | 246.27 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 414 | 246.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 421 | 246.28 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 17 | 8 |
| 455 | 246.34 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 20 | 15 |
| 458 | 246.35 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 21 | 13 |
| 464 | 246.37 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 545 | 246.48 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 621 | 246.61 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 633 | 246.62 | radiation | 20.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 652 | 246.62 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 682 | 246.65 | wind | 5.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 688 | 246.65 | wind | 5.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 696 | 246.66 | wind | 5.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 714 | 246.68 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 728 | 246.70 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 796 | 246.82 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 818 | 246.84 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 2 | 9 |
| 826 | 246.84 | atmosphere | 1005.0 | 14400 | < th | dose dependent | sin | 11 | NA |
| 835 | 246.85 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 12 |
| 851 | 246.86 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 19 |
| 853 | 246.86 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 22 |
| 858 | 246.86 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 862 | 246.87 | atmosphere | 995.0 | 14400 | > th | dose independent | no | NA | NA |
| 863 | 246.87 | atmosphere | 995.0 | 14400 | < th | dose independent | no | NA | NA |
| 872 | 246.87 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 16 |
| 970 | 246.92 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 1 | 23 |
| 971 | 246.92 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 3 | 23 |
| 986 | 246.93 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 17 |