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Os05g0497500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.9 (0.0176) R2 : 0.425
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.791 (0.0431) R2dC : 0.427 R2C : 0.425
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0159 (0.037) R2dN8 : 3e-04 R2N8 : -0.00231
σ : 0.332
deviance : 50.32
__
_____
C
peak time of C : 21.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
37.36 0.287 7.83 0.919 0.769 -0.257 0.0713 -2.96 0.165 21.5 0.7193 1419 -- --
40.47 0.296 7.88 0.718 0.714 0.621 0.12 -- 0.147 21 0.01229 1563 -- --
37.34 0.285 7.83 0.913 0.766 -0.285 -- -3.04 0.164 21.5 0.5596 1412 -- --
40.58 0.297 7.87 0.695 0.708 0.581 -- -- 0.141 21.1 2.259e-06 1562 -- --
53.58 0.341 7.82 0.565 -- -1.04 -- -2.15 0.0778 -- 1.019 1071 -- --
43.04 0.308 7.89 0.528 0.791 -- 0.196 -- 0.0742 21.6 -- -- -- --
43.18 0.308 7.89 0.52 0.79 -- -- -- 0.0738 21.6 -- -- -- --
54.45 0.344 7.89 0.444 -- -1.01 -- -- -0.00587 -- 2.931 1070 -- --
50.22 0.33 7.9 -- 0.843 0.283 -- -- 0.0331 21 8.582 2034 -- --
80.18 0.418 7.87 0.527 -- -- -- -- 0.0724 -- -- -- -- --
50.32 0.332 7.9 -- 0.791 -- -- -- 0.0159 21.7 -- -- -- --
59.19 0.358 7.9 -- -- -1.06 -- -- -0.0509 -- 2.621 1078 -- --
87.51 0.437 7.88 -- -- -- -- -- 0.0139 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.78 radiation 1.0 1440 < th dose dependent rect. 7 9
3 35.91 humidity 80.0 1440 > th dose dependent rect. 11 2
5 35.96 radiation 1.0 1440 > th dose independent rect. 7 8
6 35.96 radiation 1.0 1440 < th dose independent rect. 7 8
8 36.07 humidity 80.0 1440 > th dose dependent rect. 10 4
16 36.31 radiation 1.0 1440 > th dose independent rect. 9 6
24 36.44 wind 3.0 14400 > th dose dependent rect. 20 10
35 36.56 humidity 80.0 1440 > th dose dependent rect. 8 9
40 36.61 radiation 1.0 1440 < th dose dependent rect. 7 22
45 36.63 radiation 1.0 1440 < th dose dependent rect. 7 18
51 36.64 radiation 1.0 1440 < th dose dependent rect. 7 15
64 36.74 radiation 1.0 1440 < th dose dependent sin 0 NA
65 36.75 wind 5.0 14400 > th dose independent rect. 19 14
68 36.78 wind 5.0 14400 < th dose independent rect. 19 14
75 36.82 wind 5.0 14400 < th dose independent sin 9 NA
81 36.83 humidity 80.0 720 > th dose dependent rect. 7 15
86 36.86 wind 5.0 14400 > th dose independent sin 10 NA
103 36.88 radiation 1.0 1440 < th dose dependent rect. 18 23
114 36.90 wind 1.0 14400 < th dose independent rect. 5 1
119 36.92 wind 3.0 14400 > th dose dependent sin 10 NA
120 36.93 wind 9.0 14400 > th dose independent rect. 19 16
122 36.94 humidity 90.0 1440 > th dose independent rect. 11 3
129 36.96 humidity 90.0 1440 < th dose independent rect. 11 2
138 36.97 wind 9.0 14400 < th dose independent rect. 18 17
149 36.99 radiation 1.0 1440 < th dose dependent rect. 20 21
154 37.00 radiation 1.0 1440 < th dose dependent rect. 22 19
160 37.01 radiation 1.0 1440 < th dose dependent rect. 4 13
167 37.01 radiation 1.0 1440 < th dose dependent rect. 24 17
173 37.02 humidity 80.0 720 > th dose dependent sin 22 NA
192 37.06 radiation 1.0 1440 < th dose independent rect. 10 1
196 37.06 radiation 1.0 1440 < th dose dependent rect. 10 1
198 37.06 wind 9.0 14400 > th dose dependent rect. 18 19
250 37.17 wind 5.0 14400 < th dose independent rect. 21 1
251 37.17 temperature 15.0 1440 > th dose independent rect. 6 7
259 37.18 humidity 80.0 43200 < th dose dependent rect. 4 3
263 37.19 radiation 1.0 1440 < th dose dependent rect. 12 4
274 37.22 radiation 1.0 1440 > th dose independent rect. 10 2
275 37.22 temperature 15.0 1440 > th dose independent rect. 9 11
277 37.22 temperature 20.0 14400 < th dose dependent rect. 21 1
284 37.23 humidity 80.0 4320 > th dose independent rect. 18 1
285 37.23 humidity 80.0 43200 < th dose dependent rect. 5 1
291 37.24 temperature 15.0 4320 > th dose independent rect. 7 1
301 37.25 wind 5.0 14400 > th dose independent rect. 21 1
307 37.26 temperature 20.0 14400 > th dose independent rect. 19 1
311 37.26 temperature 15.0 90 > th dose independent rect. 7 23
321 37.28 wind 3.0 14400 > th dose dependent rect. 21 1
326 37.29 radiation 1.0 1440 > th dose independent rect. 13 2
331 37.29 temperature 15.0 1440 > th dose independent rect. 13 17
354 37.31 radiation 1.0 1440 > th dose independent rect. 7 22
364 37.32 wind 5.0 14400 > th dose dependent rect. 7 1
386 37.34 humidity 80.0 1440 > th dose independent rect. 7 13
400 37.34 radiation 1.0 1440 < th dose independent rect. 7 22
407 37.35 humidity 80.0 4320 < th dose independent rect. 18 1
409 37.35 temperature 10.0 43200 > th dose independent rect. 9 11
410 37.35 humidity 80.0 1440 < th dose independent rect. 7 14
423 37.36 radiation 1.0 1440 < th dose independent rect. 7 18
427 37.37 wind 5.0 14400 > th dose independent rect. 6 2
428 37.37 temperature 15.0 1440 > th dose independent rect. 6 3
430 37.37 temperature 20.0 14400 > th dose independent rect. 12 10
434 37.37 radiation 1.0 1440 < th dose independent rect. 7 16
443 37.38 wind 9.0 14400 < th dose independent sin 10 NA
457 37.39 temperature 20.0 14400 > th dose independent rect. 13 8
468 37.39 temperature 15.0 270 > th dose independent rect. 2 23
481 37.40 humidity 90.0 14400 > th dose dependent rect. 9 2
498 37.42 wind 9.0 14400 > th dose independent sin 10 NA
533 37.45 wind 5.0 14400 < th dose independent rect. 6 2
534 37.45 wind 5.0 14400 > th dose independent rect. 5 4
546 37.46 radiation 1.0 1440 < th dose independent sin 0 NA
548 37.46 radiation 1.0 1440 < th dose independent rect. 13 2
559 37.46 radiation 1.0 1440 < th dose dependent rect. 13 2
563 37.47 radiation 1.0 1440 > th dose independent sin 0 NA
587 37.48 radiation 1.0 1440 < th dose independent rect. 18 22
589 37.48 wind 5.0 14400 > th dose dependent rect. 5 4
604 37.49 radiation 1.0 1440 > th dose independent rect. 18 22
617 37.50 temperature 15.0 1440 > th dose independent rect. 16 14
620 37.50 temperature 15.0 1440 > th dose independent rect. 9 21
657 37.53 temperature 15.0 14400 < th dose independent rect. 20 1
673 37.54 humidity 80.0 1440 > th dose independent sin 23 NA
700 37.56 precipitation 0.1 1440 > th dose independent rect. 9 4
702 37.56 wind 5.0 14400 > th dose independent rect. 4 6
712 37.56 precipitation 0.1 1440 > th dose dependent rect. 9 4
714 37.57 wind 5.0 14400 < th dose independent rect. 5 4
734 37.58 wind 5.0 14400 < th dose independent rect. 4 6
735 37.58 temperature 20.0 14400 < th dose independent rect. 12 10
807 37.60 radiation 1.0 1440 < th dose dependent no NA NA
833 37.60 radiation 1.0 1440 < th dose dependent rect. 24 23
885 37.61 radiation 1.0 1440 < th dose dependent rect. 12 23
899 37.62 radiation 40.0 43200 > th dose dependent rect. 10 1
904 37.62 temperature 20.0 1440 < th dose dependent rect. 8 11
950 37.65 humidity 80.0 1440 < th dose independent sin 23 NA