Os05g0496000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0496000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.59 | 0.28 | 10.2 | 1.04 | 0.468 | 0.587 | 0.652 | -1.11 | 0.617 | 21.5 | 16.91 | 49 | -- | -- |
| 38.96 | 0.291 | 10.2 | 1.09 | 0.497 | 0.703 | -0.0992 | -- | 0.622 | 20.2 | 15.92 | 113 | -- | -- |
| 36.06 | 0.28 | 10.2 | 1.02 | 0.467 | 0.61 | -- | -0.667 | 0.617 | 21.1 | 16.11 | 63 | -- | -- |
| 38.41 | 0.289 | 10.2 | 1.03 | 0.484 | 0.58 | -- | -- | 0.612 | 21.2 | 14.96 | 68 | -- | -- |
| 42.18 | 0.302 | 10.1 | 1.02 | -- | 0.833 | -- | -0.677 | 0.629 | -- | 13.71 | 35 | -- | -- |
| 42.99 | 0.307 | 10.2 | 1 | 1.01 | -- | -0.447 | -- | 0.569 | 23 | -- | -- | -- | -- |
| 43.84 | 0.31 | 10.2 | 1.02 | 1.01 | -- | -- | -- | 0.57 | 23 | -- | -- | -- | -- |
| 43.81 | 0.308 | 10.1 | 1.02 | -- | 0.82 | -- | -- | 0.616 | -- | 11.85 | 20 | -- | -- |
| 65.96 | 0.378 | 10.2 | -- | 0.427 | 0.612 | -- | -- | 0.504 | 21.1 | 10 | 67 | -- | -- |
| 107.25 | 0.484 | 10.2 | 1.04 | -- | -- | -- | -- | 0.578 | -- | -- | -- | -- | -- |
| 71.34 | 0.395 | 10.2 | -- | 1.02 | -- | -- | -- | 0.457 | 23.1 | -- | -- | -- | -- |
| 70.58 | 0.391 | 10.2 | -- | -- | 0.821 | -- | -- | 0.51 | -- | 10 | 22 | -- | -- |
| 136.01 | 0.544 | 10.2 | -- | -- | -- | -- | -- | 0.462 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.49 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 2 | 34.65 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 9 | 11 |
| 6 | 35.02 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 7 | 35.03 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 18 | 35.47 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 6 | 23 |
| 19 | 35.47 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 18 | 23 |
| 21 | 35.51 | humidity | 80.0 | 30 | < th | dose independent | rect. | 7 | 11 |
| 38 | 35.70 | humidity | 80.0 | 720 | < th | dose independent | rect. | 10 | 5 |
| 57 | 35.92 | humidity | 80.0 | 30 | < th | dose independent | rect. | 24 | 18 |
| 83 | 36.11 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 95 | 36.24 | humidity | 80.0 | 10 | > th | dose independent | rect. | 8 | 12 |
| 100 | 36.26 | radiation | 20.0 | 30 | < th | dose dependent | no | NA | NA |
| 103 | 36.26 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 108 | 36.27 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 109 | 36.27 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 116 | 36.29 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 119 | 36.32 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 152 | 36.45 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 10 | 5 |
| 164 | 36.52 | humidity | 70.0 | 10 | > th | dose dependent | sin | 22 | NA |
| 207 | 36.74 | radiation | 10.0 | 90 | > th | dose independent | no | NA | NA |
| 208 | 36.74 | radiation | 10.0 | 90 | > th | dose independent | rect. | 6 | 12 |
| 313 | 36.82 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 317 | 36.82 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 366 | 36.92 | humidity | 80.0 | 30 | < th | dose independent | rect. | 20 | 22 |
| 377 | 36.95 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 18 | 20 |
| 386 | 36.97 | radiation | 10.0 | 90 | < th | dose independent | rect. | 6 | 23 |
| 409 | 37.01 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 6 | 12 |
| 447 | 37.09 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 18 | 22 |
| 481 | 37.15 | humidity | 70.0 | 270 | > th | dose independent | rect. | 22 | 21 |
| 526 | 37.23 | radiation | 10.0 | 90 | > th | dose independent | sin | 23 | NA |
| 539 | 37.25 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 23 | 19 |
| 548 | 37.27 | humidity | 70.0 | 90 | > th | dose independent | rect. | 11 | 8 |
| 563 | 37.27 | radiation | 10.0 | 90 | > th | dose independent | rect. | 9 | 23 |
| 570 | 37.27 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 22 |
| 571 | 37.27 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 587 | 37.30 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 594 | 37.30 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 615 | 37.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 618 | 37.33 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 658 | 37.37 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 674 | 37.40 | humidity | 80.0 | 10 | < th | dose independent | sin | 23 | NA |
| 702 | 37.42 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 704 | 37.42 | humidity | 60.0 | 10 | > th | dose dependent | no | NA | NA |
| 710 | 37.42 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 712 | 37.43 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 714 | 37.43 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 7 |
| 720 | 37.43 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 731 | 37.44 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 7 |
| 733 | 37.44 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 7 |
| 760 | 37.46 | radiation | 10.0 | 90 | > th | dose independent | rect. | 11 | 23 |
| 787 | 37.48 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 23 | 21 |
| 803 | 37.50 | humidity | 90.0 | 10 | < th | dose dependent | sin | 21 | NA |
| 825 | 37.52 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 827 | 37.52 | radiation | 10.0 | 30 | < th | dose independent | rect. | 18 | 23 |
| 832 | 37.52 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 833 | 37.52 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 22 | 23 |
| 835 | 37.53 | humidity | 80.0 | 10 | > th | dose independent | sin | 23 | NA |
| 867 | 37.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 10 |
| 883 | 37.56 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 10 |
| 893 | 37.56 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 10 |
| 909 | 37.57 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 7 |
| 942 | 37.59 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 944 | 37.59 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 983 | 37.61 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 24 | 20 |
| 986 | 37.62 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 989 | 37.62 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 14 |
| 990 | 37.62 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 14 |
| 1000 | 37.62 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 14 |