Os05g0495900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Beta-1,3-glucanase precursor (Fragment).
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Os05g0495900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Beta-1,3-glucanase precursor (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.79 | 0.455 | 11.7 | -0.0233 | 2.31 | -1.02 | -1.34 | -1.45 | 0.134 | 12.9 | 994.3 | 17314 | -- | -- |
| 96.71 | 0.458 | 11.7 | -0.221 | 2.3 | -1.1 | -1.36 | -- | 0.11 | 12.8 | 995.7 | 17335 | -- | -- |
| 101.32 | 0.469 | 11.7 | -0.0728 | 2.32 | -1.04 | -- | -1.45 | 0.124 | 12.9 | 992.4 | 17207 | -- | -- |
| 104.12 | 0.475 | 11.7 | -0.296 | 2.31 | -1.13 | -- | -- | 0.0845 | 12.9 | 994.7 | 17209 | -- | -- |
| 435.57 | 0.972 | 11.7 | -0.202 | -- | -1.07 | -- | -1.19 | 0.0798 | -- | 990.8 | 17373 | -- | -- |
| 119.22 | 0.512 | 11.7 | -0.0499 | 2.31 | -- | -1.37 | -- | 0.0858 | 12.9 | -- | -- | -- | -- |
| 127.08 | 0.528 | 11.7 | -0.0996 | 2.32 | -- | -- | -- | 0.079 | 12.9 | -- | -- | -- | -- |
| 437.46 | 0.974 | 11.7 | -0.382 | -- | -1.14 | -- | -- | 0.0487 | -- | 994.6 | 17347 | -- | -- |
| 106.32 | 0.48 | 11.7 | -- | 2.32 | -1.05 | -- | -- | 0.115 | 12.9 | 994.8 | 17297 | -- | -- |
| 461.27 | 1 | 11.7 | -0.185 | -- | -- | -- | -- | 0.0354 | -- | -- | -- | -- | -- |
| 127.34 | 0.528 | 11.7 | -- | 2.32 | -- | -- | -- | 0.0901 | 12.9 | -- | -- | -- | -- |
| 441.14 | 0.978 | 11.7 | -- | -- | -1.05 | -- | -- | 0.0894 | -- | 990.7 | 17367 | -- | -- |
| 462.18 | 1 | 11.7 | -- | -- | -- | -- | -- | 0.0559 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.42 | wind | 5 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 94.62 | wind | 7 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 3 | 94.70 | wind | 7 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 4 | 95.12 | wind | 7 | 4320 | > th | dose independent | rect. | 14 | 7 |
| 7 | 95.50 | wind | 7 | 4320 | < th | dose independent | rect. | 14 | 7 |
| 11 | 95.68 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 13 | 95.69 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 17 | 95.72 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 25 | 95.80 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 33 | 95.96 | wind | 7 | 4320 | > th | dose dependent | rect. | 16 | 4 |
| 46 | 96.08 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 50 | 96.11 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 7 | 8 |
| 52 | 96.11 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 53 | 96.11 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 1 | 14 |
| 56 | 96.12 | wind | 7 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 59 | 96.12 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 8 | 7 |
| 63 | 96.12 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 1 | 9 |
| 66 | 96.12 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 1 | 15 |
| 93 | 96.15 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 95 | 96.15 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 138 | 96.17 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 148 | 96.17 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 1 | 9 |
| 156 | 96.18 | atmosphere | 995 | 14400 | > th | dose dependent | sin | 3 | NA |
| 195 | 96.20 | atmosphere | 1015 | 14400 | < th | dose dependent | sin | 3 | NA |
| 540 | 96.45 | humidity | 80 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 569 | 96.47 | atmosphere | 1015 | 14400 | < th | dose dependent | no | NA | NA |
| 582 | 96.47 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 6 | 23 |
| 584 | 96.47 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 12 | 23 |
| 587 | 96.48 | atmosphere | 995 | 14400 | > th | dose dependent | no | NA | NA |
| 599 | 96.48 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 613 | 96.49 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 7 | 22 |
| 918 | 96.66 | wind | 7 | 4320 | > th | dose dependent | rect. | 15 | 6 |