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Os05g0494700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0251) R2 : 0.653
β1 : 0.738 (0.0919) R2dD : 0.051 R2D : 0.0327
β2 : 1.79 (0.0629) R2dC : 0.613 R2C : 0.598
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.187 (0.0536) R2dN8 : 0.0124 R2N8 : -0.00299
σ : 0.472
deviance : 101.42
__
_____
C
peak time of C : 15.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
86.26 0.436 11.2 0.306 1.73 -0.0975 -1.16 -3.3 0.0974 15.4 30.42 1390 -- --
90.13 0.442 11.1 0.898 1.71 -0.386 -1 -- 0.14 15.4 28.5 2762 -- --
90.38 0.443 11.2 0.341 1.76 -0.138 -- -2.93 0.096 15.4 30.97 1425 -- --
91.6 0.446 11.1 0.878 1.73 -0.393 -- -- 0.17 15.3 32.48 7020 -- --
253.42 0.741 11.2 0.0738 -- -0.188 -- -4.74 0.00707 -- 31.68 1243 -- --
98.05 0.464 11.1 0.757 1.79 -- -1.04 -- 0.193 15.4 -- -- -- --
101.42 0.472 11.1 0.738 1.79 -- -- -- 0.187 15.4 -- -- -- --
218.27 0.691 11.1 0.448 -- 1.61 -- -- 0.0321 -- 25.08 2627 -- --
109.05 0.486 11.1 -- 1.78 -0.405 -- -- 0.219 15.4 32.8 7635 -- --
280.49 0.783 11.1 0.663 -- -- -- -- 0.139 -- -- -- -- --
115.78 0.503 11.1 -- 1.77 -- -- -- 0.104 15.4 -- -- -- --
223.47 0.699 11.2 -- -- 1.67 -- -- -0.021 -- 25.08 2627 -- --
292.07 0.798 11.1 -- -- -- -- -- 0.0659 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 75.74 temperature 15.0 270 > th dose independent rect. 20 5
5 76.53 humidity 50.0 90 > th dose dependent rect. 21 6
7 76.73 wind 9.0 270 < th dose independent rect. 2 18
10 76.88 temperature 30.0 270 < th dose independent rect. 20 6
11 76.88 humidity 50.0 270 > th dose independent rect. 20 6
14 76.88 atmosphere 995.0 270 > th dose independent rect. 20 6
15 76.88 radiation 1.0 270 < th dose independent rect. 20 6
20 76.88 temperature 10.0 270 > th dose independent rect. 2 18
21 76.88 atmosphere 1015.0 270 < th dose independent rect. 2 18
23 76.88 radiation 1.0 270 < th dose dependent rect. 20 6
30 77.00 precipitation 0.1 270 < th dose independent rect. 20 6
31 77.00 precipitation 0.1 270 < th dose dependent rect. 20 6
32 77.01 wind 9.0 270 < th dose independent rect. 20 6
33 77.04 temperature 15.0 270 > th dose independent rect. 20 18
34 77.05 precipitation 0.1 270 < th dose independent rect. 2 18
35 77.05 precipitation 0.1 270 < th dose dependent rect. 2 18
36 77.06 humidity 50.0 90 > th dose dependent rect. 3 17
85 77.30 temperature 15.0 270 > th dose independent rect. 9 16
89 77.42 wind 9.0 90 < th dose dependent rect. 3 8
109 77.60 precipitation 0.1 270 < th dose independent rect. 1 8
110 77.60 precipitation 0.1 270 < th dose dependent rect. 1 8
112 77.63 wind 7.0 270 < th dose independent rect. 1 8
116 77.68 atmosphere 995.0 90 > th dose independent rect. 3 18
117 77.69 wind 9.0 270 < th dose independent rect. 15 15
119 77.71 temperature 10.0 270 > th dose dependent rect. 20 5
122 77.78 humidity 50.0 90 > th dose independent rect. 3 18
126 77.82 temperature 15.0 90 > th dose independent rect. 11 16
149 77.90 precipitation 0.1 270 < th dose independent rect. 9 16
151 77.90 precipitation 0.1 270 < th dose dependent rect. 9 16
156 77.96 precipitation 0.1 270 < th dose independent rect. 6 9
157 77.96 precipitation 0.1 270 < th dose dependent rect. 6 9
158 77.97 temperature 10.0 90 > th dose dependent rect. 22 5
160 78.01 radiation 30.0 270 < th dose independent rect. 15 15
162 78.03 temperature 15.0 270 > th dose independent rect. 6 9
167 78.07 radiation 40.0 270 < th dose independent rect. 1 8
197 78.18 atmosphere 1015.0 270 < th dose independent rect. 6 9
198 78.18 radiation 1.0 270 > th dose independent rect. 6 9
199 78.18 temperature 10.0 270 > th dose independent rect. 15 15
204 78.22 temperature 10.0 270 > th dose independent rect. 1 8
206 78.22 humidity 50.0 270 > th dose independent rect. 1 8
207 78.22 atmosphere 995.0 270 > th dose independent rect. 1 8
208 78.22 atmosphere 1015.0 270 < th dose independent rect. 1 8
210 78.23 humidity 50.0 10 > th dose dependent rect. 4 16
237 78.32 wind 9.0 270 < th dose independent rect. 14 6
238 78.33 temperature 10.0 270 > th dose dependent rect. 22 2
239 78.34 wind 9.0 270 < th dose dependent rect. 1 8
247 78.40 humidity 50.0 270 > th dose independent rect. 1 19
253 78.50 radiation 40.0 270 < th dose independent rect. 14 6
256 78.51 precipitation 0.1 90 < th dose independent rect. 3 8
257 78.51 precipitation 0.1 90 < th dose dependent rect. 3 8
258 78.52 atmosphere 995.0 270 > th dose independent rect. 6 9
261 78.53 wind 9.0 270 < th dose independent rect. 6 9
262 78.57 precipitation 0.1 270 < th dose independent rect. 15 15
263 78.57 wind 9.0 90 < th dose dependent rect. 21 6
264 78.57 precipitation 0.1 270 < th dose dependent rect. 15 15
270 78.62 humidity 50.0 90 > th dose dependent rect. 3 8
272 78.65 humidity 50.0 270 > th dose independent rect. 14 6
275 78.67 temperature 10.0 270 > th dose independent rect. 14 6
276 78.67 atmosphere 1015.0 270 < th dose independent rect. 14 6
279 78.67 atmosphere 995.0 270 > th dose independent rect. 20 18
284 78.71 wind 1.0 270 > th dose independent rect. 14 6
286 78.73 humidity 50.0 10 > th dose dependent rect. 3 19
288 78.75 humidity 50.0 270 > th dose dependent rect. 22 2
300 78.88 temperature 30.0 270 < th dose independent rect. 1 8
303 78.89 temperature 15.0 10 > th dose independent rect. 22 5
305 78.91 wind 9.0 270 < th dose independent rect. 20 18
307 78.93 temperature 10.0 90 > th dose independent rect. 3 8
308 78.93 atmosphere 995.0 90 > th dose independent rect. 3 8
309 78.93 atmosphere 1015.0 90 < th dose independent rect. 3 8
316 78.96 wind 9.0 270 < th dose independent rect. 24 22
317 78.98 wind 1.0 270 > th dose independent rect. 20 5
322 79.00 humidity 50.0 270 > th dose independent rect. 20 18
326 79.04 atmosphere 995.0 270 > th dose independent rect. 1 19
330 79.06 wind 9.0 270 < th dose independent rect. 9 16
334 79.08 wind 9.0 90 < th dose independent rect. 3 8
336 79.10 precipitation 0.1 270 < th dose independent rect. 20 18
337 79.10 precipitation 0.1 270 < th dose dependent rect. 20 18
342 79.15 temperature 30.0 270 < th dose independent rect. 22 2
343 79.15 humidity 50.0 270 > th dose independent rect. 22 2
346 79.15 atmosphere 995.0 270 > th dose independent rect. 22 2
347 79.15 radiation 1.0 270 < th dose independent rect. 22 2
352 79.15 temperature 10.0 270 > th dose independent rect. 24 22
353 79.15 radiation 1.0 270 < th dose dependent rect. 22 2
358 79.16 humidity 60.0 90 > th dose independent rect. 3 8
359 79.18 wind 9.0 270 < th dose independent rect. 22 2
360 79.18 precipitation 0.1 270 < th dose independent rect. 14 6
361 79.18 precipitation 0.1 270 < th dose dependent rect. 14 6
365 79.20 precipitation 0.1 270 < th dose independent rect. 22 2
368 79.20 precipitation 0.1 270 < th dose dependent rect. 22 2
394 79.25 humidity 50.0 270 > th dose dependent rect. 1 9
400 79.29 wind 9.0 90 < th dose independent rect. 11 16
407 79.35 radiation 10.0 10 < th dose dependent rect. 4 18
426 79.39 temperature 10.0 270 > th dose dependent rect. 1 8
432 79.40 atmosphere 995.0 270 > th dose independent rect. 9 16
445 79.48 humidity 50.0 270 > th dose independent rect. 15 4
449 79.48 temperature 20.0 10 > th dose independent rect. 23 17
452 79.50 wind 5.0 90 < th dose independent rect. 3 8
456 79.51 radiation 10.0 90 < th dose dependent rect. 3 18
516 79.60 humidity 50.0 10 > th dose dependent rect. 22 5
532 79.67 wind 1.0 270 > th dose independent rect. 6 9
536 79.69 humidity 50.0 270 > th dose independent rect. 6 9
547 79.73 precipitation 0.1 10 < th dose independent rect. 3 19
549 79.73 precipitation 0.1 10 < th dose dependent rect. 3 19
565 79.80 radiation 30.0 43200 < th dose independent rect. 17 6
574 79.82 wind 9.0 90 < th dose dependent rect. 3 18
596 79.83 radiation 40.0 270 < th dose dependent rect. 15 4
606 79.86 wind 9.0 10 < th dose independent rect. 22 6
608 79.86 temperature 30.0 10 < th dose independent rect. 22 6
609 79.86 humidity 50.0 10 > th dose independent rect. 22 6
612 79.86 atmosphere 995.0 10 > th dose independent rect. 22 6
613 79.86 radiation 1.0 10 < th dose independent rect. 22 6
618 79.86 temperature 10.0 10 > th dose independent rect. 4 18
620 79.86 atmosphere 1015.0 10 < th dose independent rect. 4 18
621 79.86 radiation 1.0 10 < th dose dependent rect. 22 6
638 79.92 atmosphere 1015.0 90 < th dose independent rect. 21 6
641 79.92 temperature 10.0 10 > th dose dependent rect. 22 6
662 80.02 precipitation 0.1 10 < th dose independent rect. 22 5
669 80.02 precipitation 0.1 10 < th dose dependent rect. 22 5
679 80.06 wind 9.0 10 < th dose independent rect. 4 18
680 80.06 wind 9.0 270 < th dose dependent rect. 22 2
728 80.15 wind 9.0 10 < th dose dependent rect. 22 5
780 80.24 radiation 1.0 270 < th dose independent rect. 2 17
830 80.31 atmosphere 995.0 270 > th dose independent rect. 14 6
834 80.32 atmosphere 995.0 10 > th dose independent rect. 4 18
864 80.42 temperature 30.0 1440 < th dose independent rect. 18 14
865 80.42 humidity 50.0 270 > th dose independent rect. 15 15
882 80.49 temperature 30.0 1440 < th dose independent rect. 18 3
911 80.51 radiation 1.0 270 < th dose independent rect. 1 19
994 80.57 humidity 50.0 270 > th dose dependent rect. 1 18