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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0493600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.13 (0.0478) R2 : 0.018
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.291 (0.101) R2dN8 : 0.0232 R2N8 : 0.018
σ : 0.9
deviance : 372.18
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
356.65 0.887 3.19 0.0465 0.174 4.25 -0.0793 15.5 -0.294 12.4 9.6 646 -- --
376.51 0.904 3.18 0.335 0.0406 2.6 -0.512 -- -0.158 11.8 9.4 389 -- --
356.67 0.88 3.19 0.0433 0.174 4.24 -- 15.5 -0.294 12.2 9.603 646 -- --
364.8 0.89 3.15 0.00148 0.111 1.41 -- -- -0.287 12.5 9.7 388 -- --
358.56 0.882 3.2 0.0309 -- 4.09 -- 14.9 -0.296 -- 9.7 646 -- --
370.07 0.902 3.14 -0.196 0.128 -- -0.0379 -- -0.31 13.1 -- -- -- --
370.07 0.901 3.14 -0.198 0.128 -- -- -- -0.311 13 -- -- -- --
361.63 0.886 3.1 -0.126 -- 2.72 -- -- -0.234 -- 10.9 232 -- --
364.6 0.889 3.13 -- 0.117 1.43 -- -- -0.268 11.5 9.6 388 -- --
371.1 0.9 3.14 -0.202 -- -- -- -- -0.313 -- -- -- -- --
371.1 0.901 3.13 -- 0.132 -- -- -- -0.289 13 -- -- -- --
361.47 0.885 3.13 -- -- 2.32 -- -- -0.278 -- 11.27 320 -- --
372.18 0.9 3.13 -- -- -- -- -- -0.291 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 345.84 temperature 20 10 < th dose dependent rect. 22 1
4 346.88 temperature 20 90 < th dose independent rect. 20 1
34 353.84 wind 9 720 > th dose independent rect. 17 18
39 354.12 wind 9 10 > th dose independent rect. 15 1
47 354.12 wind 9 10 > th dose dependent rect. 15 1
59 354.47 wind 9 720 > th dose dependent rect. 17 19
69 355.98 humidity 90 90 > th dose independent rect. 21 1
70 356.01 wind 5 1440 > th dose independent rect. 15 1
71 356.12 humidity 90 10 > th dose independent rect. 22 1
74 356.15 radiation 1 90 < th dose independent rect. 8 1
77 356.15 radiation 1 90 < th dose dependent rect. 8 1
86 356.29 wind 5 1440 < th dose independent rect. 15 1
87 356.32 wind 9 270 > th dose independent rect. 21 19
91 356.45 wind 3 1440 > th dose dependent rect. 15 1
95 356.51 wind 9 720 > th dose dependent sin 10 NA
99 356.58 wind 9 270 > th dose independent rect. 1 15
102 356.61 humidity 90 90 > th dose dependent rect. 21 1
103 356.63 wind 9 720 > th dose dependent rect. 14 21
105 356.73 wind 9 720 > th dose dependent rect. 17 22
111 356.84 wind 9 270 > th dose independent rect. 10 6
121 356.95 wind 9 90 > th dose dependent rect. 22 18
122 356.97 wind 9 90 > th dose dependent rect. 1 15
129 357.07 wind 9 90 > th dose dependent rect. 9 7
162 357.31 wind 3 90 < th dose dependent rect. 20 1
176 357.51 wind 9 720 > th dose independent sin 10 NA
178 357.56 temperature 20 720 > th dose dependent rect. 4 1
191 357.64 wind 9 1440 < th dose dependent rect. 15 1
207 357.89 wind 7 1440 < th dose independent rect. 13 2
214 358.01 wind 9 720 > th dose dependent rect. 17 2
215 358.01 wind 9 720 > th dose dependent rect. 17 9
223 358.02 wind 7 1440 > th dose independent rect. 13 2
227 358.04 wind 9 720 > th dose dependent rect. 17 6
230 358.04 atmosphere 1000 270 < th dose dependent rect. 15 9
239 358.16 wind 9 720 > th dose independent rect. 17 2
241 358.20 atmosphere 1000 270 < th dose independent rect. 15 14
245 358.24 wind 9 720 > th dose dependent rect. 10 16
254 358.26 wind 9 720 > th dose dependent rect. 10 13
267 358.29 wind 9 720 > th dose dependent rect. 10 9
269 358.30 wind 9 720 > th dose independent rect. 14 22
286 358.47 radiation 40 14400 > th dose independent rect. 13 1
287 358.47 atmosphere 1000 270 < th dose independent rect. 15 9
293 358.48 atmosphere 1000 270 > th dose independent sin 15 NA
301 358.49 wind 9 720 > th dose dependent no NA NA
318 358.49 wind 9 720 > th dose dependent rect. 1 22
337 358.51 radiation 40 14400 < th dose independent rect. 13 1
338 358.51 wind 9 720 > th dose dependent sin 18 NA
417 358.56 atmosphere 1000 270 < th dose independent sin 14 NA
444 358.61 wind 9 720 > th dose independent rect. 17 9
457 358.62 wind 9 720 > th dose independent rect. 17 6
462 358.63 atmosphere 1000 270 < th dose dependent sin 14 NA
474 358.70 atmosphere 1000 270 < th dose dependent rect. 15 14
482 358.74 wind 9 270 > th dose independent sin 5 NA
491 358.77 atmosphere 1000 270 < th dose dependent rect. 16 6
492 358.77 atmosphere 1000 10 < th dose dependent rect. 16 8
540 358.99 radiation 30 14400 > th dose dependent rect. 13 1
542 359.00 atmosphere 995 43200 > th dose independent rect. 20 2
551 359.05 atmosphere 1000 10 < th dose dependent sin 12 NA
554 359.06 wind 9 90 > th dose dependent rect. 13 22
559 359.08 wind 9 720 > th dose dependent rect. 14 4
593 359.14 wind 9 720 > th dose dependent rect. 14 12
608 359.16 wind 9 720 > th dose dependent rect. 14 9
619 359.19 wind 9 720 < th dose independent sin 10 NA
620 359.19 atmosphere 995 43200 < th dose independent rect. 21 1
636 359.19 atmosphere 995 43200 < th dose dependent rect. 21 1
665 359.26 wind 9 14400 > th dose independent rect. 15 1
678 359.27 radiation 40 43200 < th dose independent rect. 16 15
739 359.43 wind 9 270 > th dose dependent sin 5 NA
747 359.44 atmosphere 1000 10 < th dose dependent rect. 16 17
759 359.46 atmosphere 1000 10 < th dose independent rect. 23 10
781 359.50 wind 7 14400 > th dose dependent rect. 15 1
832 359.57 radiation 30 14400 > th dose independent sin 15 NA
833 359.57 wind 9 14400 < th dose independent rect. 15 1
894 359.63 atmosphere 1000 30 < th dose dependent rect. 22 10
903 359.66 humidity 90 14400 < th dose dependent rect. 3 3
915 359.68 atmosphere 1000 720 < th dose independent rect. 19 1
921 359.69 wind 9 270 < th dose independent sin 5 NA
964 359.71 radiation 10 14400 < th dose dependent rect. 6 1
980 359.73 radiation 10 90 < th dose dependent rect. 21 23