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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0493100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to KI domain interacting kinase 1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.23 (0.0568) R2 : 0.11
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.32 (0.236) R2dE : 0.0646 R2E : 0.0763
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.432 (0.122) R2dN8 : 0.0338 R2N8 : 0.0455
σ : 1.06
deviance : 517.62
__
_____
C
peak time of C : --
E
wheather : wind
threshold : 8.078
memory length : 3727
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
494.23 1.04 4.43 0.184 0.609 -1.82 1.42 -5.26 -0.797 22.3 8.901 4460 -- --
500.49 1.04 4.25 -0.00548 0.459 -1.24 1.93 -- -0.514 21.8 8.5 3796 -- --
501.75 1.04 4.42 0.146 0.596 -1.84 -- -5.03 -0.799 22.9 8.953 4490 -- --
509.17 1.05 4.25 -0.0574 0.346 -1.25 -- -- -0.442 21.8 8.095 3727 -- --
515.54 1.06 4.45 0.276 -- -1.57 -- -4.4 -1.03 -- 8.6 5369 -- --
527.68 1.08 4.29 -0.376 0.431 -- 1.65 -- -0.641 21.3 -- -- -- --
536.49 1.08 4.29 -0.442 0.434 -- -- -- -0.646 22.6 -- -- -- --
517.67 1.06 4.24 -0.0239 -- -1.28 -- -- -0.439 -- 8 3699 -- --
508.82 1.05 4.24 -- 0.379 -1.24 -- -- -0.44 22.4 8.1 3727 -- --
548.05 1.09 4.28 -0.434 -- -- -- -- -0.644 -- -- -- -- --
541.64 1.09 4.28 -- 0.431 -- -- -- -0.597 22.5 -- -- -- --
517.62 1.06 4.23 -- -- -1.32 -- -- -0.432 -- 8.078 3727 -- --
553.02 1.1 4.27 -- -- -- -- -- -0.596 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 472.56 wind 1 43200 < th dose dependent rect. 12 1
2 474.18 wind 9 14400 < th dose independent rect. 16 21
3 474.82 wind 7 14400 > th dose dependent rect. 19 1
4 475.17 wind 7 14400 > th dose dependent rect. 17 20
5 475.19 wind 1 43200 < th dose independent rect. 8 11
6 475.28 wind 3 43200 < th dose dependent rect. 15 1
11 475.52 radiation 40 43200 < th dose independent rect. 8 1
12 475.54 wind 1 43200 > th dose independent rect. 12 7
13 475.55 wind 1 43200 < th dose independent rect. 12 7
14 475.57 humidity 80 43200 < th dose dependent rect. 21 14
17 475.67 wind 9 14400 > th dose independent rect. 16 21
21 475.84 wind 1 43200 < th dose independent rect. 12 1
24 475.95 radiation 30 43200 < th dose independent rect. 16 17
29 476.05 wind 1 43200 < th dose independent rect. 12 5
31 476.09 wind 1 43200 > th dose independent rect. 12 5
32 476.12 radiation 30 43200 < th dose independent rect. 3 6
35 476.12 radiation 30 43200 < th dose independent rect. 21 12
36 476.12 radiation 30 43200 < th dose independent rect. 19 14
37 476.13 radiation 30 43200 < th dose independent rect. 23 10
43 476.14 radiation 30 43200 < th dose independent rect. 5 4
59 476.51 wind 1 43200 > th dose independent rect. 8 11
70 476.77 wind 9 14400 < th dose independent rect. 17 3
85 476.98 wind 1 43200 < th dose independent sin 22 NA
86 476.99 wind 7 14400 < th dose independent rect. 19 7
88 477.00 radiation 10 43200 < th dose independent rect. 17 15
91 477.04 wind 7 14400 > th dose independent rect. 19 7
92 477.06 radiation 10 43200 > th dose dependent rect. 17 14
95 477.08 wind 7 14400 > th dose independent rect. 19 1
98 477.12 humidity 90 43200 < th dose dependent rect. 3 1
101 477.18 wind 1 43200 < th dose independent rect. 8 6
103 477.19 radiation 1 43200 > th dose dependent rect. 4 2
121 477.33 wind 1 43200 < th dose dependent rect. 8 11
129 477.43 radiation 30 43200 > th dose dependent rect. 16 17
133 477.45 wind 1 43200 < th dose dependent rect. 6 14
136 477.47 radiation 30 43200 > th dose dependent rect. 7 2
151 477.49 wind 9 14400 < th dose independent rect. 16 10
178 477.68 humidity 80 43200 < th dose dependent sin 8 NA
179 477.69 wind 9 14400 > th dose independent rect. 17 3
207 478.04 radiation 10 43200 < th dose independent rect. 6 1
222 478.11 wind 7 14400 > th dose dependent rect. 19 7
223 478.13 radiation 40 43200 < th dose dependent rect. 18 12
228 478.16 radiation 10 43200 < th dose dependent rect. 18 12
236 478.25 radiation 40 43200 < th dose independent rect. 15 19
237 478.25 wind 1 43200 < th dose dependent rect. 8 5
240 478.27 wind 7 14400 > th dose dependent rect. 17 10
266 478.47 radiation 40 43200 < th dose dependent rect. 2 4
283 478.59 radiation 40 43200 < th dose dependent rect. 21 9
297 478.67 wind 1 43200 > th dose independent sin 22 NA
300 478.68 humidity 80 43200 < th dose independent rect. 23 17
312 478.73 humidity 70 43200 < th dose independent rect. 20 15
313 478.74 wind 1 43200 > th dose independent rect. 8 6
332 478.80 radiation 10 43200 < th dose independent rect. 3 5
336 478.80 radiation 10 43200 < th dose independent rect. 22 10
361 478.84 wind 1 43200 > th dose independent rect. 12 1
384 478.98 wind 3 43200 < th dose dependent rect. 14 5
414 479.10 humidity 80 43200 < th dose independent rect. 24 15
416 479.11 humidity 50 43200 > th dose independent rect. 17 1
435 479.23 humidity 70 43200 > th dose independent rect. 20 15
440 479.28 humidity 50 43200 < th dose independent rect. 17 1
448 479.33 wind 3 43200 < th dose independent rect. 15 1
465 479.40 wind 9 14400 > th dose independent rect. 16 10
531 479.76 humidity 80 43200 > th dose independent rect. 23 17
554 479.91 wind 7 14400 > th dose dependent sin 13 NA
559 479.93 humidity 80 43200 < th dose dependent rect. 21 1
560 479.94 wind 7 14400 < th dose independent rect. 21 1
567 479.98 humidity 70 43200 < th dose independent sin 8 NA
585 480.04 wind 3 43200 > th dose independent rect. 15 1
591 480.05 wind 7 14400 < th dose independent rect. 19 1
626 480.18 wind 1 43200 < th dose dependent sin 22 NA
652 480.33 wind 9 14400 < th dose independent sin 13 NA
657 480.37 wind 5 14400 > th dose dependent rect. 21 1
690 480.59 radiation 40 43200 < th dose independent sin 11 NA
703 480.63 humidity 60 43200 < th dose dependent rect. 17 1
711 480.66 radiation 10 43200 < th dose independent sin 11 NA
726 480.71 wind 3 14400 > th dose dependent sin 12 NA
742 480.79 humidity 50 43200 > th dose independent rect. 16 14
781 480.94 humidity 50 43200 > th dose independent rect. 16 4
799 481.01 humidity 50 43200 > th dose independent rect. 16 8
853 481.18 wind 7 14400 > th dose dependent rect. 17 3
857 481.20 wind 7 14400 > th dose independent sin 12 NA
861 481.22 humidity 50 43200 < th dose independent rect. 16 13
863 481.23 humidity 50 43200 < th dose independent rect. 16 15
894 481.33 humidity 50 43200 < th dose independent rect. 16 4
895 481.33 humidity 80 43200 > th dose independent rect. 24 9
955 481.51 humidity 80 43200 > th dose independent sin 4 NA
983 481.56 wind 3 14400 > th dose dependent rect. 17 13