Os05g0492500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os05g0492500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.96 | 0.239 | 10.1 | -1.42 | 0.868 | 0.656 | 0.548 | 0.0469 | 0.0846 | 4.78 | 71.02 | 1375 | -- | -- |
| 25.94 | 0.237 | 10.1 | -1.41 | 0.874 | 0.658 | 0.553 | -- | 0.0852 | 4.71 | 71 | 1352 | -- | -- |
| 26.62 | 0.24 | 10.1 | -1.4 | 0.897 | 0.656 | -- | -0.0997 | 0.0862 | 4.63 | 71 | 1302 | -- | -- |
| 26.64 | 0.24 | 10.1 | -1.41 | 0.904 | 0.666 | -- | -- | 0.0844 | 4.62 | 71.28 | 1299 | -- | -- |
| 46.89 | 0.319 | 10.2 | -1.47 | -- | 1.09 | -- | 0.36 | 0.108 | -- | 74.13 | 1891 | -- | -- |
| 42.41 | 0.305 | 10.2 | -1.54 | 0.825 | -- | 0.395 | -- | -0.0157 | 4.93 | -- | -- | -- | -- |
| 42.81 | 0.306 | 10.2 | -1.55 | 0.828 | -- | -- | -- | -0.0176 | 4.97 | -- | -- | -- | -- |
| 46.52 | 0.318 | 10.1 | -1.41 | -- | 1.12 | -- | -- | 0.111 | -- | 74.39 | 1900 | -- | -- |
| 76.84 | 0.408 | 10.1 | -- | 0.908 | 0.867 | -- | -- | 0.26 | 4.52 | 70.21 | 1290 | -- | -- |
| 78.87 | 0.415 | 10.2 | -1.52 | -- | -- | -- | -- | 0.00361 | -- | -- | -- | -- | -- |
| 105.78 | 0.481 | 10.1 | -- | 0.801 | -- | -- | -- | 0.155 | 5.03 | -- | -- | -- | -- |
| 88.83 | 0.439 | 10.1 | -- | -- | 1.06 | -- | -- | 0.212 | -- | 70.31 | 459 | -- | -- |
| 139.46 | 0.551 | 10.1 | -- | -- | -- | -- | -- | 0.172 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.10 | humidity | 60 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 2 | 24.15 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 5 | 24.20 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 7 |
| 6 | 24.20 | humidity | 60 | 1440 | > th | dose dependent | rect. | 8 | 6 |
| 23 | 24.65 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 33 | 24.75 | humidity | 90 | 1440 | < th | dose dependent | rect. | 8 | 6 |
| 45 | 24.89 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 81 | 25.18 | humidity | 60 | 1440 | > th | dose dependent | rect. | 7 | 12 |
| 90 | 25.24 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 99 | 25.28 | humidity | 50 | 1440 | > th | dose dependent | sin | 1 | NA |
| 111 | 25.35 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 138 | 25.46 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 180 | 25.61 | humidity | 90 | 1440 | < th | dose dependent | sin | 2 | NA |
| 233 | 25.79 | humidity | 90 | 1440 | < th | dose dependent | rect. | 7 | 12 |
| 444 | 26.46 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 504 | 26.60 | humidity | 70 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 658 | 26.83 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 784 | 26.94 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 20 |
| 954 | 27.21 | humidity | 70 | 1440 | < th | dose independent | rect. | 13 | 23 |