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Os05g0492100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.73 (0.0263) R2 : 0.439
β1 : -1.07 (0.0963) R2dD : 0.157 R2D : 0.186
β2 : 0.913 (0.0686) R2dC : 0.219 R2C : 0.209
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.294 (0.0562) R2dN8 : 0.0452 R2N8 : 0.0581
σ : 0.495
deviance : 111.59
__
_____
C
peak time of C : 18.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
95.96 0.46 7.74 -1.05 1.06 -0.643 0.00888 0.409 0.3 20.3 19.92 17 -- --
96.58 0.458 7.74 -1.06 1.07 -0.658 0.276 -- 0.292 20.4 19.92 17 -- --
95.96 0.456 7.74 -1.05 1.06 -0.643 -- 0.412 0.3 20.3 19.93 17 -- --
96.84 0.458 7.74 -1.07 1.06 -0.644 -- -- 0.3 20.3 19.96 17 -- --
146.56 0.564 7.72 -1.07 -- -0.443 -- 0.413 0.248 -- 29.92 68 -- --
111.46 0.495 7.73 -1.07 0.914 -- -0.238 -- 0.295 18.4 -- -- -- --
111.59 0.495 7.73 -1.07 0.913 -- -- -- 0.294 18.4 -- -- -- --
128.91 0.529 7.76 -1.18 -- -0.664 -- -- 0.186 -- 29.35 820 -- --
128.06 0.527 7.74 -- 1.05 -0.581 -- -- 0.321 20.2 19.97 18 -- --
154.91 0.582 7.72 -1.09 -- -- -- -- 0.275 -- -- -- -- --
141.71 0.557 7.71 -- 0.928 -- -- -- 0.413 18.3 -- -- -- --
162.3 0.593 7.74 -- -- -0.768 -- -- 0.274 -- 29.92 796 -- --
186.4 0.637 7.69 -- -- -- -- -- 0.396 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 81.91 radiation 10.0 270 < th dose independent rect. 3 4
3 82.29 temperature 10.0 270 > th dose dependent rect. 3 4
4 82.62 atmosphere 1010.0 270 < th dose independent rect. 3 4
5 82.62 wind 9.0 270 < th dose independent rect. 7 20
6 82.90 radiation 30.0 270 < th dose dependent rect. 3 4
12 83.16 humidity 70.0 270 > th dose independent rect. 3 4
13 83.32 wind 7.0 270 < th dose independent rect. 3 4
16 83.42 temperature 10.0 270 > th dose independent rect. 3 4
18 83.42 temperature 30.0 270 < th dose independent rect. 3 4
19 83.42 humidity 50.0 270 > th dose independent rect. 3 4
21 83.42 atmosphere 995.0 270 > th dose independent rect. 3 4
24 83.42 temperature 10.0 270 > th dose independent rect. 7 20
25 83.43 temperature 10.0 270 > th dose dependent rect. 2 6
26 83.45 precipitation 0.1 270 < th dose independent rect. 3 4
27 83.45 precipitation 0.1 270 < th dose dependent rect. 3 4
35 84.03 temperature 10.0 270 > th dose dependent rect. 4 2
37 84.06 radiation 40.0 90 < th dose independent rect. 15 18
41 84.21 atmosphere 1010.0 270 < th dose independent rect. 2 6
44 84.33 precipitation 0.1 270 < th dose independent rect. 7 20
45 84.33 precipitation 0.1 270 < th dose dependent rect. 7 20
51 84.40 wind 1.0 270 > th dose independent rect. 13 18
56 84.52 humidity 50.0 270 > th dose dependent rect. 3 4
62 84.61 wind 9.0 270 < th dose independent rect. 6 22
65 84.65 wind 9.0 270 < th dose independent rect. 17 10
66 84.67 temperature 10.0 10 > th dose independent rect. 9 6
68 84.67 atmosphere 995.0 10 > th dose independent rect. 9 6
69 84.67 atmosphere 1015.0 10 < th dose independent rect. 9 6
70 84.67 precipitation 0.1 10 < th dose independent rect. 9 6
71 84.67 temperature 10.0 10 > th dose independent rect. 15 18
72 84.67 precipitation 0.1 10 < th dose dependent rect. 9 6
73 84.72 radiation 40.0 90 < th dose independent rect. 13 20
97 84.81 atmosphere 1010.0 270 < th dose independent rect. 4 2
98 84.82 wind 9.0 10 < th dose independent rect. 9 6
101 84.86 wind 1.0 270 > th dose independent rect. 3 4
102 84.89 radiation 30.0 90 < th dose independent rect. 5 4
103 84.89 temperature 10.0 1440 > th dose independent rect. 10 6
106 84.89 temperature 10.0 1440 > th dose independent rect. 16 18
111 84.91 wind 9.0 270 < th dose dependent rect. 3 4
112 84.93 radiation 10.0 270 < th dose dependent rect. 3 10
114 84.94 precipitation 0.1 30 < th dose independent rect. 15 18
115 84.94 precipitation 0.1 30 < th dose dependent rect. 15 18
121 85.00 wind 9.0 30 < th dose independent rect. 15 18
124 85.03 radiation 40.0 270 < th dose dependent rect. 17 10
127 85.08 temperature 10.0 270 > th dose independent rect. 17 10
128 85.08 radiation 20.0 270 < th dose independent rect. 17 10
131 85.08 temperature 10.0 270 > th dose independent rect. 3 14
132 85.08 atmosphere 1015.0 270 < th dose independent rect. 3 14
138 85.14 temperature 10.0 10 > th dose dependent rect. 5 4
141 85.17 wind 1.0 30 > th dose independent rect. 5 4
145 85.21 radiation 1.0 10 > th dose independent rect. 9 6
154 85.30 humidity 50.0 270 > th dose independent rect. 17 10
155 85.31 atmosphere 995.0 10 > th dose independent rect. 15 18
157 85.38 wind 1.0 90 > th dose independent rect. 8 7
161 85.42 radiation 10.0 270 < th dose independent rect. 3 14
163 85.44 precipitation 0.1 270 < th dose independent rect. 3 14
164 85.44 precipitation 0.1 270 < th dose dependent rect. 3 14
173 85.51 radiation 40.0 90 < th dose dependent rect. 5 4
183 85.57 wind 7.0 270 < th dose independent rect. 4 2
190 85.62 precipitation 0.1 270 < th dose independent rect. 4 2
191 85.62 precipitation 0.1 270 < th dose dependent rect. 4 2
193 85.64 temperature 10.0 270 > th dose independent rect. 4 2
195 85.64 temperature 30.0 270 < th dose independent rect. 4 2
196 85.64 humidity 50.0 270 > th dose independent rect. 4 2
199 85.64 atmosphere 995.0 270 > th dose independent rect. 4 2
204 85.64 temperature 10.0 270 > th dose independent rect. 6 22
227 85.74 wind 3.0 90 < th dose independent rect. 5 4
238 85.84 precipitation 0.1 270 < th dose independent rect. 17 10
240 85.84 precipitation 0.1 270 < th dose dependent rect. 17 10
269 86.02 humidity 70.0 90 > th dose independent rect. 5 4
273 86.05 humidity 50.0 270 > th dose independent rect. 7 20
278 86.09 radiation 1.0 90 < th dose dependent sin 12 NA
288 86.11 wind 9.0 90 < th dose dependent rect. 5 4
311 86.23 atmosphere 995.0 30 > th dose dependent rect. 9 6
316 86.28 atmosphere 995.0 270 > th dose independent rect. 3 14
319 86.29 radiation 1.0 30 > th dose independent rect. 15 18
323 86.34 atmosphere 995.0 270 > th dose independent rect. 13 18
329 86.41 temperature 30.0 90 < th dose independent rect. 5 4
330 86.41 radiation 1.0 30 > th dose independent rect. 5 4
346 86.45 humidity 90.0 10 < th dose independent rect. 5 4
352 86.46 temperature 10.0 270 > th dose independent rect. 13 18
381 86.60 humidity 50.0 270 > th dose dependent rect. 2 6
383 86.63 radiation 1.0 30 > th dose independent rect. 17 16
386 86.64 atmosphere 995.0 270 > th dose independent rect. 18 9
397 86.71 humidity 50.0 270 > th dose dependent rect. 4 2
401 86.75 precipitation 0.1 270 < th dose independent rect. 13 18
402 86.75 precipitation 0.1 270 < th dose dependent rect. 13 18
407 86.79 radiation 1.0 90 < th dose independent sin 12 NA
411 86.80 wind 9.0 10 < th dose independent rect. 9 20
416 86.81 wind 9.0 270 < th dose independent rect. 3 14
537 87.22 humidity 50.0 90 > th dose dependent rect. 5 4
546 87.26 wind 9.0 270 < th dose independent rect. 13 18
565 87.31 humidity 90.0 10 < th dose independent rect. 9 6
593 87.52 radiation 1.0 90 > th dose independent sin 12 NA
597 87.58 atmosphere 1015.0 270 < th dose independent rect. 7 19
598 87.58 atmosphere 995.0 90 > th dose independent rect. 8 21
602 87.60 humidity 50.0 270 > th dose independent rect. 7 6
607 87.62 temperature 30.0 270 < th dose independent rect. 18 9
652 87.83 humidity 50.0 30 > th dose independent rect. 9 6
723 88.11 atmosphere 995.0 270 > th dose independent rect. 7 19
730 88.17 atmosphere 1015.0 10 < th dose independent rect. 15 18
757 88.23 wind 7.0 270 < th dose independent rect. 9 1
760 88.23 radiation 40.0 90 < th dose dependent rect. 15 18
809 88.42 temperature 10.0 1440 > th dose independent rect. 5 5
812 88.42 atmosphere 995.0 1440 > th dose independent rect. 5 5
813 88.42 atmosphere 1015.0 1440 < th dose independent rect. 5 5
814 88.42 temperature 10.0 1440 > th dose independent rect. 10 19
833 88.47 atmosphere 995.0 10 > th dose dependent rect. 5 4
860 88.52 wind 1.0 30 > th dose independent rect. 15 18
883 88.61 temperature 10.0 270 > th dose independent rect. 9 1
884 88.61 atmosphere 995.0 270 > th dose independent rect. 9 1
885 88.61 atmosphere 1015.0 270 < th dose independent rect. 9 1
897 88.61 temperature 10.0 270 > th dose independent rect. 10 23
898 88.62 wind 1.0 270 > th dose independent rect. 9 1
901 88.63 precipitation 0.1 270 < th dose independent rect. 9 1
902 88.63 precipitation 0.1 270 < th dose dependent rect. 9 1
965 88.88 atmosphere 1015.0 30 < th dose independent rect. 9 20