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Os05g0487300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.41 (0.0281) R2 : 0.676
β1 : -1.65 (0.115) R2dD : 0.198 R2D : 0.0745
β2 : 1.79 (0.0656) R2dC : 0.537 R2C : 0.488
β3 : -1.15 (0.119) R2dE : 0.0958 R2E : -0.0526
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0321 (0.0638) R2dN8 : 0.000537 R2N8 : 0.000222
σ : 0.514
deviance : 121.86
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C
peak time of C : 23.4
E
wheather : radiation
threshold : 0.3093
memory length : 14619
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
105.18 0.482 9.41 -1.87 1.83 -0.838 -1.82 2.06 0.0628 23.3 0.7759 4442 -- --
111.89 0.493 9.42 -1.63 1.74 -1.01 -1.33 -- 0.0732 23.2 0.3615 14517 -- --
111.34 0.491 9.4 -1.9 1.55 -0.913 -- 3.15 0.0443 23.9 0.7406 5320 -- --
121.86 0.514 9.41 -1.65 1.79 -1.15 -- -- 0.0321 23.4 0.3093 14619 -- --
192.15 0.649 9.26 -1.01 -- 1.09 -- -1.24 0.385 -- 2.212 3995 -- --
133.67 0.542 9.32 -1.14 1.72 -- -1.56 -- 0.333 23.2 -- -- -- --
143.91 0.562 9.31 -1.08 1.72 -- -- -- 0.337 23.3 -- -- -- --
176.65 0.622 9.27 -1.01 -- 1.51 -- -- 0.343 -- 30 47520 -- --
171.71 0.61 9.31 -- 1.66 -0.473 -- -- 0.355 23.5 1.83 6457 -- --
329.59 0.848 9.27 -1.04 -- -- -- -- 0.354 -- -- -- -- --
174.82 0.618 9.29 -- 1.71 -- -- -- 0.458 23.3 -- -- -- --
203.72 0.667 9.25 -- -- 1.52 -- -- 0.456 -- 30 47520 -- --
358.07 0.883 9.25 -- -- -- -- -- 0.469 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 99.43 temperature 10 270 > th dose dependent rect. 3 18
3 99.91 temperature 10 270 > th dose dependent rect. 2 20
7 100.78 radiation 1 1440 < th dose dependent rect. 18 10
10 100.96 radiation 1 1440 < th dose dependent rect. 18 1
17 101.36 radiation 1 1440 < th dose dependent rect. 18 4
29 102.82 wind 5 43200 > th dose independent rect. 14 7
30 102.94 wind 5 43200 > th dose independent rect. 15 2
32 102.99 wind 5 43200 < th dose independent rect. 14 7
36 103.07 humidity 90 43200 < th dose independent rect. 20 1
45 103.20 wind 5 43200 < th dose independent rect. 13 4
48 103.26 wind 5 43200 < th dose independent rect. 15 2
69 103.46 temperature 10 10 > th dose dependent rect. 5 15
79 103.53 wind 3 43200 > th dose dependent rect. 13 8
83 103.56 wind 3 43200 > th dose dependent rect. 13 4
170 104.27 humidity 90 43200 > th dose independent rect. 22 1
176 104.35 wind 9 43200 < th dose independent rect. 18 3
192 104.45 wind 9 43200 > th dose dependent rect. 19 2
196 104.49 radiation 1 43200 < th dose independent rect. 18 10
199 104.51 radiation 1 4320 < th dose dependent rect. 5 1
200 104.52 radiation 1 43200 < th dose independent rect. 18 1
205 104.55 radiation 1 43200 < th dose independent rect. 18 4
206 104.55 radiation 1 43200 < th dose independent rect. 18 6
213 104.58 humidity 90 43200 < th dose independent rect. 19 4
214 104.59 temperature 20 270 > th dose dependent rect. 13 21
219 104.62 wind 9 43200 < th dose dependent rect. 13 2
223 104.65 radiation 1 4320 < th dose dependent rect. 23 7
224 104.65 radiation 1 4320 < th dose dependent rect. 21 9
229 104.67 radiation 1 4320 < th dose dependent rect. 1 5
239 104.72 humidity 90 43200 > th dose independent rect. 20 1
240 104.73 radiation 1 43200 > th dose independent rect. 18 1
255 104.77 humidity 90 43200 > th dose independent rect. 20 3
268 104.80 wind 5 43200 < th dose independent sin 18 NA
269 104.80 wind 9 43200 < th dose dependent rect. 11 6
271 104.80 temperature 20 720 > th dose dependent rect. 21 19
276 104.83 radiation 1 4320 > th dose independent rect. 17 13
282 104.85 wind 9 43200 > th dose independent rect. 18 3
298 104.92 radiation 1 14400 < th dose dependent rect. 18 1
303 104.94 wind 9 43200 < th dose dependent rect. 11 11
309 104.97 radiation 1 14400 < th dose dependent rect. 18 4
317 104.99 humidity 90 43200 > th dose dependent rect. 21 1
327 105.03 temperature 30 720 < th dose dependent rect. 18 18
330 105.05 wind 5 43200 > th dose independent sin 18 NA
335 105.07 wind 9 43200 < th dose dependent rect. 13 9
347 105.11 humidity 90 43200 < th dose independent rect. 22 1
352 105.13 temperature 10 720 > th dose dependent rect. 21 19
377 105.22 wind 3 43200 > th dose dependent sin 18 NA
388 105.25 temperature 25 1440 < th dose independent rect. 10 10
402 105.30 radiation 1 270 < th dose dependent sin 13 NA
406 105.31 humidity 90 43200 > th dose dependent rect. 3 10
421 105.35 humidity 90 43200 > th dose dependent rect. 4 7
435 105.40 temperature 25 1440 < th dose independent rect. 14 6
442 105.42 temperature 20 1440 > th dose dependent rect. 15 6
466 105.49 temperature 10 10 > th dose dependent rect. 5 17
481 105.53 radiation 1 4320 < th dose dependent sin 11 NA
490 105.56 radiation 1 90 < th dose dependent sin 11 NA
497 105.59 radiation 1 4320 < th dose dependent rect. 17 16
593 105.78 humidity 90 43200 > th dose dependent rect. 8 1
606 105.82 temperature 25 1440 > th dose independent rect. 14 5
616 105.84 temperature 30 720 < th dose dependent sin 9 NA
620 105.85 humidity 90 43200 > th dose independent rect. 3 9
621 105.85 temperature 25 1440 > th dose independent rect. 12 10
624 105.86 temperature 25 1440 > th dose independent rect. 13 7
630 105.87 humidity 90 43200 > th dose dependent sin 3 NA
633 105.87 humidity 90 43200 > th dose dependent rect. 3 21
634 105.88 temperature 25 1440 < th dose independent sin 20 NA
636 105.88 temperature 25 1440 > th dose independent rect. 10 10
640 105.88 humidity 90 14400 > th dose dependent rect. 21 8
657 105.92 temperature 25 1440 > th dose independent rect. 10 12
684 105.97 humidity 90 43200 > th dose dependent rect. 5 2
702 105.99 humidity 90 43200 > th dose independent rect. 4 7
739 106.07 humidity 80 43200 < th dose independent rect. 12 2
763 106.12 radiation 1 43200 > th dose independent rect. 7 1
767 106.12 humidity 90 14400 > th dose dependent rect. 23 4
781 106.15 radiation 1 43200 < th dose independent rect. 7 1
861 106.27 wind 5 43200 < th dose dependent rect. 20 1
878 106.30 humidity 90 43200 > th dose independent rect. 5 2
917 106.36 radiation 30 14400 < th dose independent rect. 17 14
923 106.38 radiation 1 43200 < th dose independent rect. 18 17
931 106.39 radiation 30 14400 < th dose independent rect. 5 2
932 106.39 radiation 1 43200 > th dose independent rect. 5 6
933 106.39 radiation 1 43200 < th dose independent rect. 5 6
969 106.43 radiation 1 43200 < th dose independent rect. 18 15
980 106.44 wind 9 43200 < th dose dependent sin 19 NA
985 106.44 radiation 1 43200 < th dose dependent rect. 18 15
990 106.45 humidity 90 43200 > th dose independent rect. 3 21