Os05g0486200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0486200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.89 | 0.448 | 10.7 | 1.44 | 0.704 | -0.727 | 0.444 | -0.148 | 0.385 | 21.3 | 71.52 | 1210 | -- | -- |
| 90.91 | 0.444 | 10.7 | 1.45 | 0.7 | -0.73 | 0.44 | -- | 0.388 | 21.3 | 71.76 | 1214 | -- | -- |
| 91.53 | 0.446 | 10.6 | 1.44 | 0.7 | -0.739 | -- | 0.0259 | 0.392 | 21.5 | 72.24 | 1216 | -- | -- |
| 91.53 | 0.446 | 10.7 | 1.44 | 0.699 | -0.737 | -- | -- | 0.391 | 21.5 | 72.24 | 1217 | -- | -- |
| 116.4 | 0.502 | 10.6 | 1.42 | -- | -0.657 | -- | 0.309 | 0.446 | -- | 83.73 | 1438 | -- | -- |
| 102.98 | 0.476 | 10.6 | 1.32 | 0.636 | -- | 0.454 | -- | 0.463 | 20.7 | -- | -- | -- | -- |
| 103.61 | 0.477 | 10.6 | 1.3 | 0.633 | -- | -- | -- | 0.462 | 20.9 | -- | -- | -- | -- |
| 116.52 | 0.503 | 10.6 | 1.4 | -- | -0.63 | -- | -- | 0.44 | -- | 83 | 1436 | -- | -- |
| 141.82 | 0.555 | 10.7 | -- | 0.671 | -0.558 | -- | -- | 0.346 | 21.4 | 115.8 | 1262 | -- | -- |
| 126.5 | 0.526 | 10.6 | 1.3 | -- | -- | -- | -- | 0.458 | -- | -- | -- | -- | -- |
| 148.2 | 0.569 | 10.7 | -- | 0.631 | -- | -- | -- | 0.318 | 21.1 | -- | -- | -- | -- |
| 165.18 | 0.599 | 10.6 | -- | -- | -0.484 | -- | -- | 0.33 | -- | 116.1 | 1461 | -- | -- |
| 171.13 | 0.611 | 10.6 | -- | -- | -- | -- | -- | 0.314 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.21 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 2 | 83.21 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 3 | 83.23 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 4 | 83.23 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 15 | 84.19 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 40 | 85.83 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 41 | 85.84 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 46 | 86.16 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 5 |
| 63 | 86.94 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 66 | 87.06 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 80 | 87.78 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 91 | 88.13 | wind | 7.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 93 | 88.14 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 95 | 88.17 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 97 | 88.20 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 102 | 88.36 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 4 |
| 104 | 88.41 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 110 | 88.53 | wind | 7.0 | 4320 | < th | dose independent | rect. | 15 | 4 |
| 111 | 88.53 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 8 |
| 112 | 88.55 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 128 | 88.68 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 132 | 88.75 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 135 | 88.77 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 12 |
| 140 | 88.79 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 10 |
| 144 | 88.82 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 151 | 88.96 | wind | 1.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 155 | 89.00 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 160 | 89.02 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 161 | 89.02 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 188 | 89.15 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 192 | 89.22 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 197 | 89.28 | wind | 3.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 206 | 89.46 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 24 | 9 |
| 237 | 89.56 | wind | 3.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 242 | 89.57 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 10 |
| 267 | 89.64 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 19 | NA |
| 268 | 89.64 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 8 |
| 299 | 89.74 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 346 | 89.97 | radiation | 10.0 | 1440 | < th | dose independent | sin | 16 | NA |
| 408 | 90.16 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 412 | 90.20 | wind | 1.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 479 | 90.56 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 3 |
| 500 | 90.66 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 530 | 90.78 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 532 | 90.78 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 534 | 90.78 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 585 | 90.78 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 589 | 90.78 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 649 | 90.84 | atmosphere | 1010.0 | 10 | < th | dose dependent | sin | 8 | NA |
| 659 | 90.92 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 670 | 90.95 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 706 | 91.04 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 716 | 91.06 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 15 | 20 |
| 728 | 91.09 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 730 | 91.10 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 731 | 91.10 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 21 | 11 |
| 740 | 91.12 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 753 | 91.13 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 15 | 19 |
| 773 | 91.17 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 20 | 15 |
| 777 | 91.18 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 799 | 91.22 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 827 | 91.26 | wind | 5.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 841 | 91.29 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 844 | 91.29 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 22 | 13 |
| 863 | 91.33 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 865 | 91.34 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 876 | 91.35 | temperature | 20.0 | 720 | > th | dose independent | rect. | 11 | 19 |
| 962 | 91.49 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 973 | 91.49 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 984 | 91.50 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 2 |