Os05g0485000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sodium/hydrogen exchanger family protein.
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Os05g0485000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sodium/hydrogen exchanger family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.68 | 0.378 | 3 | -0.632 | 0.127 | -1.72 | -0.0133 | 8.87 | -0.0551 | 12 | 999.7 | 251 | -- | -- |
| 65.73 | 0.381 | 2.9 | -0.104 | 0.118 | -0.117 | -0.0455 | -- | -0.0563 | 11.8 | 999.7 | 251 | -- | -- |
| 64.68 | 0.375 | 3 | -0.631 | 0.127 | -1.71 | -- | 8.85 | -0.0554 | 12.1 | 999.7 | 255 | -- | -- |
| 65.65 | 0.377 | 2.9 | -0.106 | 0.12 | -0.139 | -- | -- | -0.0557 | 11.9 | 999.7 | 250 | -- | -- |
| 65.7 | 0.378 | 3 | -0.636 | -- | -1.72 | -- | 8.84 | -0.0558 | -- | 999.7 | 255 | -- | -- |
| 66.09 | 0.381 | 2.9 | -0.0837 | 0.121 | -- | -0.0343 | -- | -0.0639 | 11.9 | -- | -- | -- | -- |
| 66.1 | 0.381 | 2.9 | -0.085 | 0.121 | -- | -- | -- | -0.064 | 12 | -- | -- | -- | -- |
| 66.57 | 0.38 | 2.91 | -0.111 | -- | -0.141 | -- | -- | -0.0571 | -- | 999.7 | 214 | -- | -- |
| 65.95 | 0.378 | 2.9 | -- | 0.122 | -0.121 | -- | -- | -0.0452 | 12 | 999.7 | 253 | -- | -- |
| 67.02 | 0.383 | 2.91 | -0.0888 | -- | -- | -- | -- | -0.0656 | -- | -- | -- | -- | -- |
| 66.29 | 0.381 | 2.9 | -- | 0.122 | -- | -- | -- | -0.0545 | 12 | -- | -- | -- | -- |
| 66.89 | 0.381 | 2.9 | -- | -- | -0.122 | -- | -- | -0.0463 | -- | 999.6 | 237 | -- | -- |
| 67.23 | 0.383 | 2.91 | -- | -- | -- | -- | -- | -0.0558 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.68 | atmosphere | 1e+03 | 10 | < th | dose independent | rect. | 17 | 1 |
| 13 | 49.68 | atmosphere | 1e+03 | 10 | < th | dose dependent | rect. | 17 | 1 |
| 74 | 58.71 | humidity | 8e+01 | 30 | > th | dose independent | rect. | 11 | 1 |
| 79 | 58.91 | temperature | 3e+01 | 90 | > th | dose independent | rect. | 16 | 1 |
| 87 | 60.19 | humidity | 7e+01 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 91 | 60.30 | humidity | 7e+01 | 30 | > th | dose dependent | rect. | 10 | 3 |
| 96 | 60.41 | wind | 1e+00 | 10 | < th | dose independent | rect. | 9 | 3 |
| 120 | 61.10 | wind | 7e+00 | 270 | > th | dose independent | rect. | 14 | 1 |
| 125 | 61.20 | precipitation | 1e-01 | 270 | > th | dose independent | rect. | 8 | 1 |
| 126 | 61.20 | precipitation | 1e-01 | 270 | > th | dose dependent | rect. | 8 | 1 |
| 157 | 61.74 | humidity | 6e+01 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 163 | 61.78 | wind | 1e+00 | 10 | < th | dose dependent | rect. | 9 | 3 |
| 181 | 61.83 | humidity | 6e+01 | 90 | < th | dose dependent | rect. | 18 | 16 |
| 184 | 61.84 | humidity | 6e+01 | 90 | < th | dose independent | rect. | 17 | 17 |
| 186 | 61.85 | humidity | 6e+01 | 90 | < th | dose independent | rect. | 18 | 15 |
| 189 | 61.85 | radiation | 1e+01 | 90 | < th | dose dependent | rect. | 9 | 3 |
| 192 | 61.86 | humidity | 6e+01 | 270 | < th | dose independent | rect. | 8 | 1 |
| 218 | 61.86 | humidity | 6e+01 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 280 | 61.92 | humidity | 6e+01 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 298 | 61.93 | humidity | 6e+01 | 10 | < th | dose independent | rect. | 9 | 1 |
| 375 | 61.93 | wind | 1e+00 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 377 | 61.93 | humidity | 6e+01 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 464 | 61.95 | radiation | 2e+01 | 90 | < th | dose independent | rect. | 10 | 1 |
| 466 | 61.95 | humidity | 6e+01 | 1440 | > th | dose independent | rect. | 2 | 7 |
| 478 | 61.99 | wind | 1e+00 | 10 | < th | dose independent | rect. | 9 | 1 |
| 483 | 61.99 | wind | 1e+00 | 10 | < th | dose independent | rect. | 8 | 8 |
| 511 | 62.00 | humidity | 6e+01 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 516 | 62.00 | humidity | 6e+01 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 535 | 62.02 | radiation | 4e+01 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 636 | 62.15 | humidity | 6e+01 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 708 | 62.21 | wind | 7e+00 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 891 | 62.60 | radiation | 4e+01 | 10 | > th | dose dependent | sin | 12 | NA |