Os05g0482400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os05g0482400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 157.04 | 0.589 | 8.16 | 0.362 | 1.21 | -1.07 | 0.745 | 0.0162 | 0.0343 | 6.06 | 71.23 | 1239 | -- | -- |
| 157.04 | 0.584 | 8.16 | 0.364 | 1.21 | -1.07 | 0.745 | -- | 0.0352 | 6.07 | 71.18 | 1237 | -- | -- |
| 158.4 | 0.586 | 8.16 | 0.369 | 1.22 | -1.07 | -- | 0.00107 | 0.0324 | 6.08 | 71.15 | 1238 | -- | -- |
| 158.4 | 0.586 | 8.16 | 0.371 | 1.22 | -1.07 | -- | -- | 0.032 | 6.07 | 71.22 | 1238 | -- | -- |
| 233.51 | 0.712 | 8.19 | 0.384 | -- | -1.17 | -- | 0.00262 | 0.0386 | -- | 71.57 | 1282 | -- | -- |
| 196.48 | 0.657 | 8.13 | 0.586 | 1.29 | -- | 0.819 | -- | 0.19 | 5.36 | -- | -- | -- | -- |
| 198.15 | 0.659 | 8.13 | 0.588 | 1.29 | -- | -- | -- | 0.186 | 5.39 | -- | -- | -- | -- |
| 233.49 | 0.712 | 8.19 | 0.385 | -- | -1.17 | -- | -- | 0.0349 | -- | 71.52 | 1289 | -- | -- |
| 161.92 | 0.593 | 8.17 | -- | 1.22 | -1.12 | -- | -- | -0.016 | 6.1 | 71.93 | 1238 | -- | -- |
| 285.5 | 0.79 | 8.15 | 0.632 | -- | -- | -- | -- | 0.218 | -- | -- | -- | -- | -- |
| 207.25 | 0.673 | 8.15 | -- | 1.3 | -- | -- | -- | 0.121 | 5.37 | -- | -- | -- | -- |
| 237.29 | 0.717 | 8.2 | -- | -- | -1.23 | -- | -- | -0.0149 | -- | 71.66 | 1288 | -- | -- |
| 296.02 | 0.803 | 8.16 | -- | -- | -- | -- | -- | 0.148 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 152.15 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 2 | 153.58 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 10 | 157.33 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 11 | 157.54 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 12 | 157.60 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 14 | 157.69 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 20 | 18 |
| 18 | 157.93 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 1 | 13 |
| 37 | 158.11 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 5 | NA |
| 38 | 158.11 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 64 | 158.54 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 74 | 158.77 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 77 | 158.82 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 81 | 158.93 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 84 | 158.96 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 86 | 159.04 | humidity | 80.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 91 | 159.14 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 99 | 159.30 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 3 |
| 104 | 159.40 | humidity | 80.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 105 | 159.42 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 112 | 159.51 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 117 | 159.57 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 118 | 159.57 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 124 | 159.64 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 9 |
| 140 | 159.74 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 148 | 159.76 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 12 |
| 157 | 159.82 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 160 | 159.83 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 9 |
| 163 | 159.83 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 9 |
| 164 | 159.84 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 12 |
| 165 | 159.84 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 12 |
| 184 | 160.00 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 186 | 160.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 15 |
| 188 | 160.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 15 |
| 190 | 160.04 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 15 |
| 201 | 160.09 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 20 |
| 218 | 160.17 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 22 | NA |
| 222 | 160.19 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 22 | NA |
| 224 | 160.19 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 22 | NA |
| 247 | 160.29 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 250 | 160.29 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 263 | 160.37 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 20 |
| 271 | 160.43 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 273 | 160.43 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 301 | 160.52 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 306 | 160.53 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 357 | 160.67 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 384 | 160.74 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 425 | 160.91 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 441 | 160.97 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 7 |
| 442 | 160.97 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 7 |
| 454 | 161.03 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 7 |
| 458 | 161.04 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 23 | 15 |
| 478 | 161.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 486 | 161.09 | humidity | 70.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 502 | 161.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 505 | 161.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 520 | 161.16 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 533 | 161.19 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 538 | 161.20 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 550 | 161.22 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 0 | NA |
| 554 | 161.23 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 579 | 161.29 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 2 | NA |
| 590 | 161.33 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 4 | 11 |
| 600 | 161.35 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 20 |
| 604 | 161.35 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 20 |
| 609 | 161.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 9 |
| 615 | 161.37 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 20 |
| 669 | 161.46 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 14 |
| 677 | 161.48 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 16 |
| 740 | 161.61 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 21 |
| 809 | 161.78 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 891 | 161.94 | humidity | 60.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 930 | 162.00 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 957 | 162.05 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 5 |
| 970 | 162.07 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 2 |
| 979 | 162.09 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 19 |