Os05g0481600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0481600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11.74 | 0.161 | 12.7 | -0.694 | 0.12 | -0.568 | 0.0389 | 0.219 | -0.188 | 11.8 | 80.02 | 1459 | -- | -- |
| 11.78 | 0.16 | 12.7 | -0.678 | 0.125 | -0.555 | 0.0313 | -- | -0.184 | 12 | 80 | 1446 | -- | -- |
| 11.74 | 0.16 | 12.7 | -0.692 | 0.119 | -0.566 | -- | 0.211 | -0.187 | 11.9 | 80.03 | 1459 | -- | -- |
| 11.78 | 0.16 | 12.7 | -0.676 | 0.134 | -0.549 | -- | -- | -0.185 | 12.3 | 80.4 | 1420 | -- | -- |
| 12.5 | 0.165 | 12.7 | -0.698 | -- | -0.602 | -- | 0.287 | -0.188 | -- | 80.06 | 1536 | -- | -- |
| 15.47 | 0.184 | 12.7 | -0.666 | 0.134 | -- | -0.0129 | -- | -0.152 | 11.8 | -- | -- | -- | -- |
| 15.47 | 0.184 | 12.7 | -0.667 | 0.134 | -- | -- | -- | -0.152 | 11.8 | -- | -- | -- | -- |
| 12.57 | 0.165 | 12.7 | -0.677 | -- | -0.584 | -- | -- | -0.185 | -- | 80.71 | 1534 | -- | -- |
| 23.51 | 0.226 | 12.7 | -- | 0.16 | -0.464 | -- | -- | -0.173 | 12.6 | 82 | 2872 | -- | -- |
| 16.61 | 0.19 | 12.7 | -0.671 | -- | -- | -- | -- | -0.154 | -- | -- | -- | -- | -- |
| 27.2 | 0.244 | 12.7 | -- | 0.143 | -- | -- | -- | -0.0779 | 12 | -- | -- | -- | -- |
| 24.01 | 0.228 | 12.7 | -- | -- | -0.601 | -- | -- | -0.111 | -- | 82.03 | 1593 | -- | -- |
| 28.48 | 0.249 | 12.7 | -- | -- | -- | -- | -- | -0.0794 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 10.66 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 11 |
| 2 | 10.70 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 10 |
| 6 | 10.76 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 7 | 10.77 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 8 | 10.77 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 8 |
| 14 | 10.81 | humidity | 80 | 1440 | > th | dose dependent | rect. | 10 | 11 |
| 20 | 10.85 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 60 | 11.02 | humidity | 80 | 1440 | > th | dose independent | sin | 21 | NA |
| 62 | 11.02 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 91 | 11.11 | humidity | 80 | 1440 | < th | dose independent | sin | 21 | NA |
| 172 | 11.28 | humidity | 70 | 1440 | > th | dose dependent | sin | 20 | NA |
| 603 | 11.74 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 625 | 11.76 | humidity | 80 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 654 | 11.79 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 688 | 11.82 | humidity | 80 | 1440 | < th | dose independent | rect. | 19 | 23 |
| 725 | 11.85 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 762 | 11.88 | humidity | 80 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 793 | 11.91 | humidity | 80 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 827 | 11.93 | humidity | 80 | 1440 | < th | dose independent | rect. | 17 | 23 |