Os05g0481100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os05g0481100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 109.06 | 0.491 | 12.8 | 0.941 | 1.84 | 0.774 | 0.244 | -1.43 | 1.08 | 18 | 19.97 | 1300 | -- | -- |
| 113.88 | 0.497 | 12.8 | 0.896 | 1.83 | 0.79 | 0.236 | -- | 1.08 | 18 | 19.97 | 1300 | -- | -- |
| 109.18 | 0.487 | 12.8 | 0.935 | 1.85 | 0.77 | -- | -1.44 | 1.08 | 18 | 19.97 | 1295 | -- | -- |
| 114.06 | 0.497 | 12.8 | 0.901 | 1.83 | 0.786 | -- | -- | 1.08 | 18 | 19.97 | 1300 | -- | -- |
| 284.79 | 0.786 | 12.8 | 0.924 | -- | 0.772 | -- | -1.34 | 1.07 | -- | 26.65 | 1313 | -- | -- |
| 132.11 | 0.539 | 12.9 | 0.773 | 1.84 | -- | 0.085 | -- | 0.886 | 17.6 | -- | -- | -- | -- |
| 132.13 | 0.538 | 12.9 | 0.772 | 1.84 | -- | -- | -- | 0.886 | 17.6 | -- | -- | -- | -- |
| 286.51 | 0.788 | 12.8 | 0.922 | -- | 0.824 | -- | -- | 1.04 | -- | 27.3 | 1361 | -- | -- |
| 132.8 | 0.537 | 12.8 | -- | 1.81 | 0.769 | -- | -- | 1.07 | 18 | 20 | 1300 | -- | -- |
| 307.08 | 0.819 | 12.8 | 0.714 | -- | -- | -- | -- | 0.842 | -- | -- | -- | -- | -- |
| 147.86 | 0.569 | 12.9 | -- | 1.82 | -- | -- | -- | 0.8 | 17.7 | -- | -- | -- | -- |
| 302.83 | 0.81 | 12.8 | -- | -- | 0.847 | -- | -- | 0.971 | -- | 39.68 | 4244 | -- | -- |
| 320.51 | 0.836 | 12.9 | -- | -- | -- | -- | -- | 0.763 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 100.47 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 2 | 100.67 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 12 | 14 |
| 21 | 101.90 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 17 |
| 29 | 102.18 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 37 | 102.46 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 15 |
| 49 | 102.96 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 14 | 14 |
| 62 | 103.49 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 15 |
| 63 | 103.49 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 65 | 103.62 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 12 | 16 |
| 80 | 103.98 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 89 | 104.15 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 9 | 19 |
| 118 | 104.53 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 123 | 104.58 | humidity | 50.0 | 720 | > th | dose dependent | sin | 18 | NA |
| 142 | 104.81 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 8 |
| 150 | 104.85 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 183 | 105.18 | humidity | 80.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 190 | 105.28 | humidity | 60.0 | 270 | > th | dose dependent | sin | 15 | NA |
| 199 | 105.31 | humidity | 80.0 | 270 | > th | dose independent | rect. | 15 | 12 |
| 201 | 105.32 | humidity | 80.0 | 10 | > th | dose dependent | sin | 13 | NA |
| 219 | 105.47 | humidity | 50.0 | 10 | > th | dose dependent | sin | 12 | NA |
| 239 | 105.63 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 22 | 16 |
| 249 | 105.71 | wind | 7.0 | 270 | < th | dose independent | rect. | 16 | 15 |
| 253 | 105.74 | humidity | 80.0 | 270 | > th | dose independent | rect. | 12 | 15 |
| 275 | 105.85 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 292 | 105.94 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 313 | 106.10 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 318 | 106.12 | humidity | 90.0 | 10 | < th | dose independent | rect. | 16 | 16 |
| 391 | 106.61 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 413 | 106.74 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 417 | 106.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 8 |
| 418 | 106.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 424 | 106.80 | humidity | 80.0 | 30 | > th | dose independent | rect. | 14 | 14 |
| 429 | 106.83 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 430 | 106.83 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 600 | 107.72 | humidity | 80.0 | 720 | > th | dose independent | rect. | 15 | 5 |
| 603 | 107.75 | humidity | 80.0 | 720 | > th | dose independent | rect. | 14 | 7 |
| 610 | 107.77 | humidity | 80.0 | 720 | > th | dose independent | rect. | 11 | 10 |
| 612 | 107.78 | temperature | 30.0 | 720 | < th | dose independent | rect. | 14 | 5 |
| 629 | 107.85 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 3 |
| 660 | 107.94 | temperature | 30.0 | 720 | < th | dose independent | rect. | 14 | 13 |
| 739 | 108.32 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 20 |
| 769 | 108.44 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 771 | 108.45 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 22 | 15 |
| 789 | 108.51 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 12 | 16 |
| 790 | 108.51 | humidity | 80.0 | 10 | > th | dose independent | rect. | 10 | 18 |
| 796 | 108.53 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 9 |
| 797 | 108.53 | temperature | 30.0 | 720 | < th | dose independent | rect. | 6 | 15 |
| 798 | 108.53 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 9 |
| 817 | 108.60 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 10 |
| 830 | 108.65 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 17 |
| 833 | 108.65 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 17 |
| 840 | 108.67 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 9 |
| 844 | 108.69 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 13 |
| 853 | 108.71 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 15 |
| 859 | 108.76 | humidity | 90.0 | 270 | < th | dose independent | rect. | 8 | 7 |
| 860 | 108.76 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 9 |
| 870 | 108.79 | temperature | 30.0 | 720 | < th | dose independent | rect. | 11 | 16 |
| 900 | 108.89 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 12 | 18 |
| 914 | 108.92 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 11 | 16 |
| 919 | 108.93 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 12 | 16 |
| 922 | 108.94 | humidity | 90.0 | 270 | < th | dose independent | rect. | 14 | 8 |
| 930 | 108.96 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 19 | 5 |
| 944 | 109.00 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 9 |
| 970 | 109.04 | temperature | 30.0 | 720 | < th | dose independent | sin | 22 | NA |
| 975 | 109.05 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 979 | 109.05 | radiation | 1.0 | 270 | < th | dose independent | rect. | 11 | 16 |
| 998 | 109.08 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 12 | 13 |